Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0854
(595 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2; Coelom... 140 2e-32
UniRef50_P24785 Cluster: Dosage compensation regulator; n=6; End... 132 6e-30
UniRef50_Q08211 Cluster: ATP-dependent RNA helicase A; n=42; cel... 119 6e-26
UniRef50_Q4T4A4 Cluster: Chromosome undetermined SCAF9761, whole... 111 1e-23
UniRef50_Q22307 Cluster: Probable ATP-dependent RNA helicase A; ... 88 1e-16
UniRef50_A2Z8G0 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q5DD69 Cluster: SJCHGC06326 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q4QI28 Cluster: RNA helicase, putative; n=7; Trypanosom... 54 3e-06
UniRef50_UPI00015B51BF Cluster: PREDICTED: hypothetical protein;... 53 6e-06
UniRef50_Q553V0 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q10CV6 Cluster: Helicase associated domain family prote... 46 5e-04
UniRef50_Q84VZ2 Cluster: At1g58060; n=8; core eudicotyledons|Rep... 46 7e-04
UniRef50_A7SF08 Cluster: Predicted protein; n=22; Eumetazoa|Rep:... 46 9e-04
UniRef50_UPI0000DB6E29 Cluster: PREDICTED: similar to DEAH (Asp-... 45 0.002
UniRef50_A7QY15 Cluster: Chromosome undetermined scaffold_236, w... 45 0.002
UniRef50_A7SKC8 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_Q00YU4 Cluster: MRNA splicing factor ATP-dependent RNA ... 43 0.006
UniRef50_UPI000069E541 Cluster: Probable ATP-dependent RNA helic... 42 0.011
UniRef50_Q016V0 Cluster: ATP-dependent RNA helicase A; n=1; Ostr... 40 0.058
UniRef50_Q9H2U1 Cluster: Probable ATP-dependent RNA helicase DHX... 39 0.10
UniRef50_UPI0000D55D80 Cluster: PREDICTED: similar to CG1582-PA;... 38 0.13
UniRef50_UPI0000DB745A Cluster: PREDICTED: similar to CG1582-PA;... 38 0.18
UniRef50_UPI0000D56CDD Cluster: PREDICTED: similar to DEAH (Asp-... 38 0.23
UniRef50_Q01C44 Cluster: MRNA splicing factor ATP-dependent RNA ... 38 0.23
UniRef50_Q8SWT2 Cluster: GH12763p; n=2; Sophophora|Rep: GH12763p... 38 0.23
UniRef50_UPI0000EBDC65 Cluster: PREDICTED: hypothetical protein;... 37 0.31
UniRef50_Q177H6 Cluster: Dynactin; n=4; Culicidae|Rep: Dynactin ... 37 0.31
UniRef50_Q7XQP1 Cluster: OSJNBa0084A10.14 protein; n=4; Oryza sa... 36 0.54
UniRef50_Q17KE6 Cluster: ATP-dependent RNA helicase; n=2; Culici... 36 0.72
UniRef50_UPI00015B4181 Cluster: PREDICTED: similar to ATP-depend... 36 0.95
UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;... 36 0.95
UniRef50_A0VDT3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.95
UniRef50_Q4RXR5 Cluster: Chromosome 11 SCAF14979, whole genome s... 34 2.2
UniRef50_Q17DN7 Cluster: ATP-dependent RNA helicase; n=1; Aedes ... 34 2.2
UniRef50_A4RM82 Cluster: Putative uncharacterized protein; n=4; ... 34 2.2
UniRef50_Q3JLQ6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q6P158 Cluster: Putative ATP-dependent RNA helicase DHX... 33 3.8
UniRef50_Q4UPX1 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q5VR52 Cluster: Putative uncharacterized protein P0702B... 33 5.0
UniRef50_Q2R239 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q01DF3 Cluster: MRNA splicing factor ATP-dependent RNA ... 33 5.0
UniRef50_Q7Z478 Cluster: Putative ATP-dependent RNA helicase DHX... 33 5.0
UniRef50_UPI0000F2E5EC Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_Q4DNU7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q82GK9 Cluster: Putative RNA polymerase ECF-subfamily s... 32 8.8
UniRef50_Q47GW4 Cluster: Electron transport complex, RnfABCDGE t... 32 8.8
UniRef50_Q2RYC9 Cluster: Purine and other phosphorylases, family... 32 8.8
UniRef50_A7HDG5 Cluster: PAS/PAC sensor signal transduction hist... 32 8.8
UniRef50_Q0D9Z4 Cluster: Os06g0690100 protein; n=1; Oryza sativa... 32 8.8
UniRef50_Q4Q5V5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.8
>UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2;
Coelomata|Rep: ATP-dependent RNA helicase - Aedes aegypti
(Yellowfever mosquito)
Length = 1131
Score = 140 bits (339), Expect = 2e-32
Identities = 59/84 (70%), Positives = 74/84 (88%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVR 182
D+ ++L+C+GLYPNVC+H+ KRKVLTTE K ALIHKTSVNCSN++ FP P+FVFGEK+R
Sbjct: 879 DMALSLLCVGLYPNVCVHKEKRKVLTTESKAALIHKTSVNCSNLQVTFPYPMFVFGEKIR 938
Query: 183 TRAISCKQTTMVAPIHLLLFGCNK 254
TRA+SCKQ +MV+PIH+LLFG K
Sbjct: 939 TRAVSCKQMSMVSPIHILLFGSKK 962
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/105 (35%), Positives = 63/105 (60%)
Frame = +2
Query: 251 QMEWVDNVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVE 430
++EWVDN+VR+DNW+NF+M P AALI+ LRP ++ ++ R + P+ A + +++
Sbjct: 962 KVEWVDNMVRIDNWMNFEMDPHQAALIVTLRPVLQDLLIRVSENPEEANALEERYQNLID 1021
Query: 431 CLRELCVTDAR*LQT*KRRPSTCPSXESRKVPKNRFPWXKELGGN 565
+++LCV +A + +R P ++R N+FP GGN
Sbjct: 1022 VVKDLCVFNAG-DEGIQRETGLTPLDQARS-NANKFPRSDNGGGN 1064
>UniRef50_P24785 Cluster: Dosage compensation regulator; n=6;
Endopterygota|Rep: Dosage compensation regulator -
Drosophila melanogaster (Fruit fly)
Length = 1293
Score = 132 bits (319), Expect = 6e-30
Identities = 55/84 (65%), Positives = 71/84 (84%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVR 182
D+ +AL+C+GLYPN+C+H+ KRKVLTTE K AL+HKTSVNCSN+ FP P FVFGEK+R
Sbjct: 998 DVSLALLCLGLYPNICVHKEKRKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIR 1057
Query: 183 TRAISCKQTTMVAPIHLLLFGCNK 254
TRA+SCKQ +MV+P+ ++LFG K
Sbjct: 1058 TRAVSCKQLSMVSPLQVILFGSRK 1081
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +2
Query: 266 DNVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVECLREL 445
+N+VR+DNWLNF + P AA I AL+PA+E ++ A P L+ ++V+ +++L
Sbjct: 1087 NNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSDILRLEEPYAQLVKVVKDL 1146
Query: 446 CVTDA 460
CV A
Sbjct: 1147 CVKSA 1151
>UniRef50_Q08211 Cluster: ATP-dependent RNA helicase A; n=42; cellular
organisms|Rep: ATP-dependent RNA helicase A - Homo
sapiens (Human)
Length = 1270
Score = 119 bits (286), Expect = 6e-26
Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNC--SNMEQKFPSPLFVFGEK 176
D+VI+L+ G+YPNVC H+ KRK+LTTEG+ ALIHK+SVNC S+ + K+PSP FVFGEK
Sbjct: 989 DVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEK 1048
Query: 177 VRTRAISCKQTTMVAPIHLLLFGCNK 254
+RTRAIS K T+V P+ LLLF K
Sbjct: 1049 IRTRAISAKGMTLVTPLQLLLFASKK 1074
>UniRef50_Q4T4A4 Cluster: Chromosome undetermined SCAF9761, whole
genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF9761, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1091
Score = 111 bits (267), Expect = 1e-23
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNC--SNMEQKFPSPLFVFGEK 176
D+V++L+ G YPNVC H+ KRK+LTTEG+ ALIHK+SVNC + + FPSP FVF EK
Sbjct: 926 DVVVSLLTFGSYPNVCFHKEKRKILTTEGRAALIHKSSVNCPFGSQDLTFPSPFFVFSEK 985
Query: 177 VRTRAISCKQTTMVAPIHLLLFGCNK 254
+RTRAIS K T+V P+ LLLF K
Sbjct: 986 IRTRAISAKGMTLVTPLQLLLFAWKK 1011
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +2
Query: 269 NVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVECLREL 445
+VV LD+W+ ++ A + ALR +E +V A +P+ Q +++++ +R +
Sbjct: 1017 DVVELDDWIKLRVPHEVAGGLAALRAGLEALVVEVAQEPENIRQMDQKKQRMLNLVRHV 1075
>UniRef50_Q22307 Cluster: Probable ATP-dependent RNA helicase A; n=3;
Caenorhabditis|Rep: Probable ATP-dependent RNA helicase A
- Caenorhabditis elegans
Length = 1301
Score = 88.2 bits (209), Expect = 1e-16
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTS--VNCSN-MEQKFPSPLFVFGE 173
+L+ +L+ M LYPNV + GKRKVLT E ALI+K S V +N E FPSPL VF E
Sbjct: 1003 NLMRSLLVMALYPNVAYYVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTE 1062
Query: 174 KVRTRAISCKQTTMVAPIHLLLFGCNK 254
KVRTR ISCKQ ++++ I LL+FG K
Sbjct: 1063 KVRTRCISCKQMSVISAIQLLVFGSRK 1089
Score = 41.9 bits (94), Expect = 0.011
Identities = 16/60 (26%), Positives = 38/60 (63%)
Frame = +2
Query: 266 DNVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVECLREL 445
+ +VR+D + +M+ +AA +I LRP IE ++ ++ P++ +P++ ++ + LR++
Sbjct: 1095 EGLVRIDETITIRMNVSTAAALIGLRPCIEALLVKSCENPESLAGLNPSDAELRQLLRDI 1154
>UniRef50_A2Z8G0 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1035
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 DLVIALMCMGLYPNV--CLHQGKRKVLTTEGKPAL-IHKTSVNCSNMEQKFPSPLFVFGE 173
++V A++C GLYPNV C +GKR T+ + IH +SVN +FP P V+ E
Sbjct: 877 EMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVGKVDIHPSSVNAGI--HQFPLPYLVYSE 934
Query: 174 KVRTRAISCKQTTMVAPIHLLLFG 245
KV+T +I + +T ++ LLLFG
Sbjct: 935 KVKTASIYVRDSTNISDYALLLFG 958
>UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1180
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC-LHQGKRK--VLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEK 176
L+ A++C GLYP +C + Q ++ + T E L+H SVN E K P P VF EK
Sbjct: 898 LIRAVICCGLYPGICSVVQNEKSFSLKTMEDGQVLLHSNSVNAR--ECKIPYPWLVFNEK 955
Query: 177 VRTRAISCKQTTMVAPIHLLLFG 245
++ ++ + +T V+ LLLFG
Sbjct: 956 IKVNSVFLRDSTAVSDSVLLLFG 978
>UniRef50_Q5DD69 Cluster: SJCHGC06326 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06326 protein - Schistosoma
japonicum (Blood fluke)
Length = 247
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 272 VVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVECLRELCV 451
+V +D+W+ F+MS SAA I A RPA+E ++ R +P+ +++V+ LR+LC
Sbjct: 27 IVVIDDWIPFRMSFTSAARIFAFRPALEALLVRTCLRPEGIADLREEDKRVINVLRQLCS 86
Query: 452 TDA 460
+A
Sbjct: 87 PEA 89
>UniRef50_Q4QI28 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative - Leishmania
major
Length = 1234
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 16/95 (16%)
Frame = +3
Query: 9 VIALMCMGLYPNVC---LHQGKR-------------KVLTTEGKPALIHKTSVNCSNMEQ 140
++A + GLYPNV + +G R K T +G L+H +SV ++ E
Sbjct: 977 ILACLVAGLYPNVAQMRMPRGSRSVGGGNYGGRHTVKFTTFDGSECLVHPSSV--ASKET 1034
Query: 141 KFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
F SPL V+ +KV+T A ++ ++VAP+H++LFG
Sbjct: 1035 SFASPLLVYVDKVKTSATFLREVSVVAPLHVILFG 1069
>UniRef50_UPI00015B51BF Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 990
Score = 52.8 bits (121), Expect = 6e-06
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCL----HQGKRKVLTTEGKPALIHKTSVNCSNME-QKFPSPLFVFG 170
LV A++C GLYPN+ + +G K LTTE + +H +S+N FPSP +
Sbjct: 806 LVKAIVCAGLYPNIAIIKRASRGGVKALTTEKEMVKLHPSSLNNKVTSLSSFPSPYITYF 865
Query: 171 EKVRTRAISCKQTTMVAPIHLL 236
K +T AI TT V+P+ LL
Sbjct: 866 LKRKTTAIYLFDTTCVSPVALL 887
>UniRef50_Q553V0 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 1472
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFV-FGEKV 179
D++ A++C GL+PN+ Q K++ T + +H +S+ + ++ P +V F EK
Sbjct: 1313 DIIRAIICSGLFPNIA-RQRKKREFKTLSENTFLHPSSIVYNLFQELNPKENWVIFEEKF 1371
Query: 180 RTRAISCKQTTMVAPIHLLLFG 245
+T+ K T + I LLLFG
Sbjct: 1372 KTKLTFIKTITRIPEISLLLFG 1393
>UniRef50_Q10CV6 Cluster: Helicase associated domain family protein,
expressed; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Helicase associated domain family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 1138
Score = 46.4 bits (105), Expect = 5e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC--LH-QGKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEK 176
LV ++C GL+P + +H + T + L++ SVN Q P P VFGEK
Sbjct: 851 LVRGIICSGLFPGITSVVHRENSMSFKTMDDGQVLLYANSVNAKY--QTIPYPWLVFGEK 908
Query: 177 VRTRAISCKQTTMVAPIHLLLFG 245
V+ A+ + +T V+ L+LFG
Sbjct: 909 VKVNAVFIRDSTGVSDSILILFG 931
>UniRef50_Q84VZ2 Cluster: At1g58060; n=8; core eudicotyledons|Rep:
At1g58060 - Arabidopsis thaliana (Mouse-ear cress)
Length = 260
Score = 46.0 bits (104), Expect = 7e-04
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Frame = +3
Query: 3 DLVIALMCMGLYPNVCLH-QGKRKV----LTTEG-------------KPALIHKTSVNCS 128
++V A++C GLYPN+ + +G + LT +G + IH +S+N S
Sbjct: 89 EVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSIN-S 147
Query: 129 NMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
N + F +P VF EKV T + + TT+V+P +LLFG
Sbjct: 148 NFKA-FQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFG 185
>UniRef50_A7SF08 Cluster: Predicted protein; n=22; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 802
Score = 45.6 bits (103), Expect = 9e-04
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCL--HQGKRK----VLTTEGKPALIHKTSVNCSNMEQKFPSPLFVF 167
LV A++C GLYPNV H K K + T E +H SVN F + ++
Sbjct: 616 LVKAILCAGLYPNVARIEHHDKLKRPPRLFTQEDGKVALHPKSVNVE--VTAFQNDWLIY 673
Query: 168 GEKVRTRAISCKQTTMVAPIHLLLFG 245
+K+++ + +T++AP LL FG
Sbjct: 674 HQKIKSSKVFIHDSTVIAPFPLLFFG 699
>UniRef50_UPI0000DB6E29 Cluster: PREDICTED: similar to DEAH
(Asp-Glu-Ala-His) box polypeptide 36; n=1; Apis
mellifera|Rep: PREDICTED: similar to DEAH
(Asp-Glu-Ala-His) box polypeptide 36 - Apis mellifera
Length = 964
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQGKRK----VLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGE 173
LV A++C GLYPNV + + K T E +H +SVN + +KFPSP +
Sbjct: 788 LVKAIVCAGLYPNVAIIKRVTKNGTLAWTPEDGSVTVHPSSVN--DKVKKFPSPFITYFT 845
Query: 174 KVRTRAISCKQTTMV-APIHL 233
K + AI TT V API L
Sbjct: 846 KQLSTAIYLHDTTCVTAPILL 866
>UniRef50_A7QY15 Cluster: Chromosome undetermined scaffold_236,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_236, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 370
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC--LHQGKR-KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEK 176
L+ ++C GLYP +C + GK + T E L H SVN E K P P VF EK
Sbjct: 177 LIRVVICCGLYPRICSVVQNGKSFSLKTMEDGQVLWHSNSVN--TRECKIPYPWLVFNEK 234
Query: 177 VRTRAISCKQTTMVAPIHLLLFG 245
++ ++ + + + LLLFG
Sbjct: 235 IKVNSVFSE----IQQLLLLLFG 253
>UniRef50_A7SKC8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 163
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/64 (26%), Positives = 39/64 (60%)
Frame = +2
Query: 269 NVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPDAALQFSPAERKVVECLRELC 448
+V+ +DNW+ +M A+++A+R AI+ ++ RAA+ P + + P + +++ ++ L
Sbjct: 22 DVICMDNWVQLRMPHAQGAMVVAMRQAIDMLLIRAASNPVSIAEPLPEDEQIINTVKSLS 81
Query: 449 VTDA 460
+A
Sbjct: 82 RNNA 85
>UniRef50_Q00YU4 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1680
Score = 42.7 bits (96), Expect = 0.006
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQGKRK----------------VLTTEGKPALIHKTSVNCSNME 137
LV A++C GLYPNV + K V T +H TSV C +
Sbjct: 1115 LVRAVICAGLYPNVACASAQAKTDDSRARSRYPSSSVTVRTKHDSDVHLHPTSV-CYGLN 1173
Query: 138 QKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
+F SP ++ EKVRT + + T V LLLFG
Sbjct: 1174 -RFDSPFLLYHEKVRTTKVYLRDATAVGSYPLLLFG 1208
>UniRef50_UPI000069E541 Cluster: Probable ATP-dependent RNA helicase
DHX36 (EC 3.6.1.-) (DEAH box protein 36) (MLE-like
protein 1) (RNA helicase associated with AU-rich element
ARE).; n=1; Xenopus tropicalis|Rep: Probable
ATP-dependent RNA helicase DHX36 (EC 3.6.1.-) (DEAH box
protein 36) (MLE-like protein 1) (RNA helicase associated
with AU-rich element ARE). - Xenopus tropicalis
Length = 967
Score = 41.9 bits (94), Expect = 0.011
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQ---GKR----KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFV 164
L+ A++C GLYP V + GKR KV T IH SVN E +F V
Sbjct: 789 LIKAVICAGLYPKVAKIRPNFGKRRKMVKVYTKSDGKVNIHPKSVNVE--ETEFHYSWLV 846
Query: 165 FGEKVRTRAISCKQTTMVAPIHLLLFG 245
+ K+RT +I T V+P LL FG
Sbjct: 847 YHLKMRTTSIYLYDCTEVSPYSLLFFG 873
>UniRef50_Q016V0 Cluster: ATP-dependent RNA helicase A; n=1;
Ostreococcus tauri|Rep: ATP-dependent RNA helicase A -
Ostreococcus tauri
Length = 182
Score = 39.5 bits (88), Expect = 0.058
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCL------HQGKRKVLTTEGKPALIHKTSVNCSNMEQKFPS-PLFV 164
++ A++ GLY NV + H +H +SVN + PS P V
Sbjct: 24 MIKAVLTAGLYANVAVGSDSSEHDYGDYTWKDATSEVRVHPSSVNRGIGSDRKPSHPFMV 83
Query: 165 FGEKVRTRAISCKQTTMVAPIHLLLFGCN 251
+ EK+RT + + ++VAP LLLFG N
Sbjct: 84 YHEKMRTARVYLRDCSVVAPEALLLFGGN 112
>UniRef50_Q9H2U1 Cluster: Probable ATP-dependent RNA helicase DHX36;
n=20; Deuterostomia|Rep: Probable ATP-dependent RNA
helicase DHX36 - Homo sapiens (Human)
Length = 1008
Score = 38.7 bits (86), Expect = 0.10
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC---LHQGKR----KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFV 164
++ A++C GLYP V L+ GK+ KV T +H SVN + F +
Sbjct: 830 IIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTD--FHYNWLI 887
Query: 165 FGEKVRTRAISCKQTTMVAPIHLLLFG 245
+ K+RT +I T V+P LL FG
Sbjct: 888 YHLKMRTSSIYLYDCTEVSPYCLLFFG 914
>UniRef50_UPI0000D55D80 Cluster: PREDICTED: similar to CG1582-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG1582-PA
- Tribolium castaneum
Length = 1241
Score = 38.3 bits (85), Expect = 0.13
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Frame = +3
Query: 3 DLVIALMCMGLYPNV--CLHQGKRKVLTTEG-----------------KPALIHKTSVNC 125
+++ A++C LYPNV L K V T G + +H +SVN
Sbjct: 1067 NVLAAILCAALYPNVIKVLTPPKSYVKTAGGAIPKDNEAKDFQFQTVKETVFLHPSSVNF 1126
Query: 126 SNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLF 242
S + FPSP V+ EKV+T + + T++ I L+LF
Sbjct: 1127 S--AKNFPSPYLVYQEKVKTSKVYFRDCTVIPVISLVLF 1163
>UniRef50_UPI0000DB745A Cluster: PREDICTED: similar to CG1582-PA; n=1;
Apis mellifera|Rep: PREDICTED: similar to CG1582-PA -
Apis mellifera
Length = 1305
Score = 37.9 bits (84), Expect = 0.18
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 102 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLF 242
IH +SVN FPSP VF EKV+T I K+ +MV + L+LF
Sbjct: 1183 IHPSSVNFH--VGYFPSPYLVFQEKVKTSKIFIKEVSMVPILPLILF 1227
>UniRef50_UPI0000D56CDD Cluster: PREDICTED: similar to DEAH
(Asp-Glu-Ala-His) box polypeptide 36; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to DEAH
(Asp-Glu-Ala-His) box polypeptide 36 - Tribolium
castaneum
Length = 885
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQ--GKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKV 179
LV A++C GLYPN+ + GK V T + +H S+ + F + + V+ +K+
Sbjct: 719 LVKAIICAGLYPNISISPVLGKAPVRTPSMRRLKLHPKSILAEC--KYFDTNILVYYKKM 776
Query: 180 RTRAISCKQTTMVAPIHLLLFG 245
+++ +++ P+ ++ FG
Sbjct: 777 KSKVDFIYDASLIHPLPVIFFG 798
>UniRef50_Q01C44 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1262
Score = 37.5 bits (83), Expect = 0.23
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC-LHQGKRK-------VLTTEGKPALI--HKTSVNCSNMEQKFPSP 155
L+ +++ GLYPN+ + G R L G+ I H +SVN +KF +
Sbjct: 1095 LLKSILVAGLYPNLIKVEPGFRADAPPRLTFLAENGRTEKIQIHPSSVNFE--AKKFITK 1152
Query: 156 LFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
V+ E+V+T AI + T V P LLLFG
Sbjct: 1153 WLVYHERVQTTAIYVRDCTAVTPYQLLLFG 1182
>UniRef50_Q8SWT2 Cluster: GH12763p; n=2; Sophophora|Rep: GH12763p -
Drosophila melanogaster (Fruit fly)
Length = 942
Score = 37.5 bits (83), Expect = 0.23
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQGKRKV----------LTTEGKPALIHKTSVNCSNMEQKFPSP 155
L+ A++ GLYPN+ + R++ T +G+ H +SVN E F S
Sbjct: 766 LLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSG--ESGFDSA 823
Query: 156 LFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
FV+ ++ ++ + +TMV P+ L++FG
Sbjct: 824 YFVYFQRQKSTDLFLLDSTMVFPMALIIFG 853
>UniRef50_UPI0000EBDC65 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 284
Score = 37.1 bits (82), Expect = 0.31
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Frame = +1
Query: 163 FSARRCAPGPSAASRPPWSLPYICC---------SSAVTNGMGGQRGAAGQLAELPDVAA 315
F + A G S+ +RPP S CC +A +G+GGQ GA A LP V
Sbjct: 77 FGSGTSAAGTSSLARPPASPSSTCCLPSEWRGPGGAAAGSGIGGQAGARAGAAGLPGVGE 136
Query: 316 IGRP 327
GRP
Sbjct: 137 GGRP 140
>UniRef50_Q177H6 Cluster: Dynactin; n=4; Culicidae|Rep: Dynactin -
Aedes aegypti (Yellowfever mosquito)
Length = 1217
Score = 37.1 bits (82), Expect = 0.31
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Frame = +2
Query: 74 INDGRETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQ---ADHHGRSHTSAALR 244
I+DG TG+ T + +L+Q A + VR R AH H++Q + + A L+
Sbjct: 352 ISDGTGTGVSTYEFKQLEQQNARLRETLVRLRDLSAHEKHEIQKLEKELETKKSEVAELQ 411
Query: 245 L*QMEWVDNVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAAAQPD--AALQFSPAER 418
+ + + L+ LN AAL +E++ E+ D AL+ AE
Sbjct: 412 RTKEKLSSKIDELEAQLNDLQEQVDAAL--GAEEMVEQLAEKKMELEDKVKALEEEVAEL 469
Query: 419 KVVECLRELCV 451
+ +E + E V
Sbjct: 470 EALEEVHEQLV 480
>UniRef50_Q7XQP1 Cluster: OSJNBa0084A10.14 protein; n=4; Oryza
sativa|Rep: OSJNBa0084A10.14 protein - Oryza sativa
(Rice)
Length = 1439
Score = 36.3 bits (80), Expect = 0.54
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 102 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
IH +S+N S ++P VF EKV T + + T++++P LLLFG
Sbjct: 1319 IHPSSMNHSLKAGQYP--FLVFLEKVETSKVFLRDTSVISPYSLLLFG 1364
>UniRef50_Q17KE6 Cluster: ATP-dependent RNA helicase; n=2;
Culicidae|Rep: ATP-dependent RNA helicase - Aedes aegypti
(Yellowfever mosquito)
Length = 1052
Score = 35.9 bits (79), Expect = 0.72
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCL--------HQGK-RKVLTTEGK-PALIHKTSVNCSNMEQKFPSP 155
L+ A++ GLYPNV H R +L EG+ A IH +SVN + + S
Sbjct: 863 LLTAIVGAGLYPNVAFVRKVIRNRHNADGRAILAIEGQGRATIHPSSVN--STLGNYDSN 920
Query: 156 LFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN 251
V+ +K + ++ TT+V P L FG N
Sbjct: 921 FVVYYDKQKISELTIFDTTVVNPFPLFFFGDN 952
>UniRef50_UPI00015B4181 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ATP-dependent RNA helicase - Nasonia
vitripennis
Length = 1271
Score = 35.5 bits (78), Expect = 0.95
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 78 TTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLF 242
T E IH +S+N S + SP VF EK++T I ++ TMV + L+LF
Sbjct: 1141 TKEDGMVNIHPSSINFS--VGYYTSPYLVFQEKIKTSRIFIREVTMVPMLALVLF 1193
>UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 625
Score = 35.5 bits (78), Expect = 0.95
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 213 WW-SACS*WPGCAPSRRKRTEARGTSAPCC 127
WW C WPG A R R TSAPCC
Sbjct: 565 WWCQLCQRWPGSAAPRGVRASPFTTSAPCC 594
>UniRef50_A0VDT3 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 392
Score = 35.5 bits (78), Expect = 0.95
Identities = 39/161 (24%), Positives = 57/161 (35%), Gaps = 7/161 (4%)
Frame = +1
Query: 133 WSRSSPRLCSFS-ARRCAPGPSAASRPPWSLPYICCSSAVTNGMGGQRGAAGQLAELPDV 309
W R++P C + A + PGPS R LP + GG + G+ P
Sbjct: 104 WRRAAPARCRAAHAAQGWPGPSGPGRLGGRLPGTAHVPGLRPHQGGAQQPGGKPLSGPAW 163
Query: 310 AAIGRPHH-SAAARHREDXXXXXXXXXXXXXVLAGRAKGGRMSAGALCDGRPVTTNIKTK 486
GR HH S R+ D G A + AGA D P +
Sbjct: 164 PGPGRVHHQSRLCRYAADGAKQLQHAGPDRRRRGGPAYAAGLGAGAFRDEFPAPLHALGA 223
Query: 487 TVNMPIXRI-----PKGSKKPIPMEXGIGGKPKPGTLSKSW 594
+P R+ P + PM GI P+ L++++
Sbjct: 224 PAALPARRLVFLCGPPLHRSMKPMSSGI-SDPRLARLAQAY 263
>UniRef50_Q4RXR5 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 337
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 133 WSRSSPRLCSFSARRCAPGPSAASRPPWSLP 225
WSR P + AR GP+ AS+PPWS P
Sbjct: 218 WSRRLPGVAD--ARAAGGGPATASKPPWSAP 246
>UniRef50_Q17DN7 Cluster: ATP-dependent RNA helicase; n=1; Aedes
aegypti|Rep: ATP-dependent RNA helicase - Aedes aegypti
(Yellowfever mosquito)
Length = 1006
Score = 34.3 bits (75), Expect = 2.2
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Frame = +3
Query: 6 LVIALMCMGLYPNVC-LHQGKRKVLTTEGKPALIHKTSVNCSNMEQK-------FPSPLF 161
+V A + GLYPN+C + + + T K H +SV +K PS
Sbjct: 611 VVKACLVAGLYPNICRVDKENATIKTRIDKKISPHPSSVIRDKSLKKNKESILSLPSEWI 670
Query: 162 VFGEKVRTRAISC--KQTTMVAPIHLLLF 242
VF EK R I C K T+VAP+ + LF
Sbjct: 671 VFEEKTRA-GIHCLIKCNTVVAPVTIALF 698
>UniRef50_A4RM82 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 682
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 428 ECLRELCVTDAR*LQT*KRRPSTCPSXESRKVPKNRFPWXKEL 556
E L + C TD + T R P PS +S +V FPW K L
Sbjct: 288 EQLDDFCSTDRMTVATANREPLRTPSVQSPQVDNGSFPWTKAL 330
>UniRef50_Q3JLQ6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 668
Score = 33.5 bits (73), Expect = 3.8
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 136 SRSSPRLCSFSARRCAPGPSAASRPPWSLPYICCSSAVTNGMGGQRGAAGQLAELPDVA- 312
S P +C + AP P + P CC S+VT+ M R + A
Sbjct: 134 STQRPIVCGVANAAGAPPPGGTPAKAAARPSHCCPSSVTSRMRRLRSSIAPARRGAQPAH 193
Query: 313 AIGRPHHSAAAR 348
GRPH AAAR
Sbjct: 194 TRGRPHPRAAAR 205
>UniRef50_Q6P158 Cluster: Putative ATP-dependent RNA helicase DHX57;
n=41; Euteleostomi|Rep: Putative ATP-dependent RNA
helicase DHX57 - Homo sapiens (Human)
Length = 1386
Score = 33.5 bits (73), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 102 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCNKWN 260
IH +SVN + F SP ++ EK++T + + +MV+ L+LFG + N
Sbjct: 1264 IHPSSVNYQ--VRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVN 1314
>UniRef50_Q4UPX1 Cluster: Putative uncharacterized protein; n=2;
Xanthomonas campestris pv. campestris|Rep: Putative
uncharacterized protein - Xanthomonas campestris pv.
campestris (strain 8004)
Length = 155
Score = 33.1 bits (72), Expect = 5.0
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Frame = +2
Query: 89 ETGI--DTQDLSELQQHGAEVPLASVRFRREGAHP---GHQLQADHHGRSHTS----AAL 241
E GI + L+ + E+ A V EG HP G +LQ D HG TS A
Sbjct: 30 EAGILPSERQLTAMGAFNQELLNAGVLLGGEGLHPSARGLRLQLDAHGSRVTSGPFAATG 89
Query: 242 RL*QMEWVDNVVRLDN---WLNFQMSPRSAALIIALRPAIE 355
L W+ V LD+ WL +P +A + I LRP E
Sbjct: 90 ELIAGFWLLQVNTLDDAVAWLKRMPNPDNAPIEIELRPVFE 130
>UniRef50_Q5VR52 Cluster: Putative uncharacterized protein
P0702B09.44; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0702B09.44 - Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -2
Query: 297 FSQLSSRTTLSTHSICYSRRAADVWERPWWSACS*WPGCAPSRRKRTEARGT 142
F SSR TL +C R+A RPWW A W A +R R T
Sbjct: 51 FLATSSRRTLPPSPLCRLLRSARCTGRPWWLAQRRWRAQAEDASERQRRRLT 102
>UniRef50_Q2R239 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 139
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 89 ETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQ--ADH 211
+ G+D +ELQ+HG EV +VR R G P ++ ADH
Sbjct: 72 KAGMDQVRTAELQKHGTEVAAVTVRLRGGGGPPPDMVEFVADH 114
>UniRef50_Q01DF3 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1546
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 102 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 245
+H TSVN K+ S V+ E+V T + + TMV LLLFG
Sbjct: 1431 LHPTSVNFHC--GKYESRWIVYSERVETAKVYIRDNTMVGAYSLLLFG 1476
>UniRef50_Q7Z478 Cluster: Putative ATP-dependent RNA helicase DHX29;
n=34; Euteleostomi|Rep: Putative ATP-dependent RNA
helicase DHX29 - Homo sapiens (Human)
Length = 1369
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIH----KTSVNCSNMEQKFPSP-LFVFG 170
L+ A++ GLY NV + V TE ++ K V+ S++ + + ++
Sbjct: 1215 LLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTHGWLLYQ 1274
Query: 171 EKVRTRAISCKQTTMVAPIHLLLFG 245
EK+R + ++TT++ P +LLFG
Sbjct: 1275 EKIRYARVYLRETTLITPFPVLLFG 1299
>UniRef50_UPI0000F2E5EC Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 417
Score = 32.7 bits (71), Expect = 6.7
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Frame = +1
Query: 133 WSRSSPRLCSFSARRCAPGPSAASR-----PPWSLPYICCSSAVTNG--MGGQRGAAGQL 291
WS +P S + R C GPSA + PP P C S T+ GGQ G GQ
Sbjct: 294 WSLEAPPNKSLALRGCVQGPSATEKSDRGQPPPRSPPGCLRSLGTSSPTWGGQSGGEGQQ 353
Query: 292 AELPDVAAIGR 324
+ +GR
Sbjct: 354 RQGTGDPQLGR 364
>UniRef50_Q4DNU7 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 2180
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 6 LVIALMCMGLYPNVCLHQGKRKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRT 185
LV ++ GL+PNV +++GKR + +SV ++ P FV+ E V++
Sbjct: 1964 LVKCVVASGLFPNVVMNRGKRLMRNKLANRLSPSSSSVVHRTSQEDITQPFFVYDELVKS 2023
>UniRef50_Q82GK9 Cluster: Putative RNA polymerase ECF-subfamily
sigma factor; n=3; Streptomyces|Rep: Putative RNA
polymerase ECF-subfamily sigma factor - Streptomyces
avermitilis
Length = 232
Score = 32.3 bits (70), Expect = 8.8
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +2
Query: 29 GPVP*RLSTPREEEGINDGRETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQAD 208
G V RLS R++ G E S A VR +REGA PG Q + D
Sbjct: 160 GTVASRLSRARKKLRALAGAEADARPAAKSASASASASASAKKVRGKREGARPGRQTRGD 219
Query: 209 H 211
H
Sbjct: 220 H 220
>UniRef50_Q47GW4 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=2; Rhodocyclaceae|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Dechloromonas aromatica (strain RCB)
Length = 570
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 457 RPVTTNIKTKTVNMPIXRIPKGSKKPIPMEXGIGGKPKP 573
+P T K ++V +PI P S+ +P+ IGG P+P
Sbjct: 12 KPATN--KVQSVTLPIATAPLPSRLAVPLHQSIGGTPRP 48
>UniRef50_Q2RYC9 Cluster: Purine and other phosphorylases, family 1;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Purine and
other phosphorylases, family 1 - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 242
Score = 32.3 bits (70), Expect = 8.8
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 136 SRSSPRLCSFSARRCAPGPSAASRPPWSLPYICCSSAVTNGMGG 267
+++SPRL A PGP+AA+R W L CS V+ G G
Sbjct: 32 AKASPRLIPLCA---GPGPAAAARASWRLMERGCSVLVSFGTAG 72
>UniRef50_A7HDG5 Cluster: PAS/PAC sensor signal transduction
histidine kinase; n=1; Anaeromyxobacter sp. Fw109-5|Rep:
PAS/PAC sensor signal transduction histidine kinase -
Anaeromyxobacter sp. Fw109-5
Length = 518
Score = 32.3 bits (70), Expect = 8.8
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Frame = +2
Query: 86 RETGIDTQDLSELQQHGAEVPLASVRFRREGAHPG--------HQLQADHHGRSHTSAAL 241
RE D E+ H PL S+R + EG +L A G L
Sbjct: 274 REAVRARDDFLEIASHELRTPLTSLRLQLEGLKLAGARGVVTPERLAAKVDGALRQETRL 333
Query: 242 RL*QMEWVDNVVRLDNWLNFQMSPRSAALIIALRPAIERIVERAA 376
E +D V R+D ++SPR A L A+R A+ER+ E AA
Sbjct: 334 ARLVDELLD-VSRIDRG-ELRLSPREADLGSAVRRAVERLSESAA 376
>UniRef50_Q0D9Z4 Cluster: Os06g0690100 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0690100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 155
Score = 32.3 bits (70), Expect = 8.8
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RPQ*TAATWSRSS-PRLCSFSARRCAP-GPSAASRPPWSLPYICCSSAVTNGMGG 267
RP A+ W P L S P PS SRPP +P + CSS G GG
Sbjct: 1 RPAEAASPWPPPPLPPLSSLLPPGPTPLPPSPPSRPPSPIPSVTCSSCPATGHGG 55
>UniRef50_Q4Q5V5 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1783
Score = 32.3 bits (70), Expect = 8.8
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +2
Query: 17 PHVHGPVP*RLSTPREEEGINDGRETGIDTQDLSELQQHGAEVPLASVRFRREGAH---- 184
PH H P P P++ E G+ S ++ ++ PLA V R + +
Sbjct: 1449 PHSHAPTPLHCRLPQQRRLATPPYE-GVQLPGASAAEERKSDAPLAQVFSRSDTSTRCLC 1507
Query: 185 -PGHQLQADHHGRSHTS 232
+ QAD H R HTS
Sbjct: 1508 AASTEFQADVHVREHTS 1524
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,176,694
Number of Sequences: 1657284
Number of extensions: 12333434
Number of successful extensions: 44196
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 41915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44153
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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