Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0854
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    27   0.46 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.6  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.8  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 437 RELCVT-DAR*LQT*KRRPSTCPSXESRKVPKNRFP 541
           R  CV  DA  ++T + R + CP+ E    PKN FP
Sbjct: 90  RGYCVKGDACSVRTFRLRSNRCPAYEEVCCPKNAFP 125


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 514 PKGSKKPIPMEXGIGGKPKPGTL 582
           P GS+ P+P   G GG   P T+
Sbjct: 606 PAGSRPPLPNLLGFGGAAPPVTI 628


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 182 HPGHQLQADHHGRSHTS 232
           H  HQ Q  HH + H++
Sbjct: 650 HQAHQHQGQHHAQHHSN 666


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 142 SSPRLCSFSARRCAPGPSAASRPPWSLPYICCSSAVTNG 258
           S P L   +    APGPSA        P +  ++A+ +G
Sbjct: 75  SVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSG 113


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 142 SSPRLCSFSARRCAPGPSAASRPPWSLPYICCSSAVTNG 258
           S P L   +    APGPSA        P +  ++A+ +G
Sbjct: 75  SVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSG 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,163
Number of Sequences: 2352
Number of extensions: 12352
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)