Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0847
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    30   0.013
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 0.013
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 88  NRNIQLNRSFNSIDVHTIIINKEGIERKLSLNL*LIIT 201
           NRNI  N S + +  HT+ I+K+ + R L   L  + T
Sbjct: 98  NRNIATNESADPLAFHTLFISKDAVWRNLRTKLSPVFT 135


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 58  FVNSTELQNINRNIQLNRSFNSIDVHTIIINK 153
           FVN   L    R+ +    ++++DV  I+ +K
Sbjct: 19  FVNGKTLHRSTRDDKYTTRYDNVDVDRILHSK 50


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 167  LSIPSLFIIIVCTSI 123
            LSIPS++++++  SI
Sbjct: 1037 LSIPSMYLLLILYSI 1051


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 167  LSIPSLFIIIVCTSI 123
            LSIPS++++++  SI
Sbjct: 1037 LSIPSMYLLLILYSI 1051


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 167  LSIPSLFIIIVCTSI 123
            LSIPS++++++  SI
Sbjct: 1037 LSIPSMYLLLILYSI 1051


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 167  LSIPSLFIIIVCTSI 123
            LSIPS++++++  SI
Sbjct: 1037 LSIPSMYLLLILYSI 1051


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,809
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)