Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0838
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9DB50 Cluster: AP-1 complex subunit sigma-2; n=24; Euk... 179 4e-44
UniRef50_P61966 Cluster: AP-1 complex subunit sigma-1A; n=109; E... 173 2e-42
UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;... 140 2e-32
UniRef50_Q6CIZ2 Cluster: Similar to sp|P35181 Saccharomyces cere... 125 6e-28
UniRef50_A4S3Y4 Cluster: Predicted protein; n=3; Viridiplantae|R... 124 1e-27
UniRef50_P35181 Cluster: AP-1 complex subunit theta-1 (Theta(1)-... 123 3e-27
UniRef50_Q5CVH4 Cluster: Aps1p/AP17 like clathrin adaptor protei... 122 5e-27
UniRef50_Q54WW3 Cluster: Clathrin-adaptor small chain; n=1; Dict... 114 2e-24
UniRef50_Q4UHU1 Cluster: Clathrin assembly protein, putative; n=... 111 8e-24
UniRef50_Q7Z1E2 Cluster: Clathrin assembly protein AP19-like pro... 110 3e-23
UniRef50_A2E7J4 Cluster: Clathrin adaptor complex small chain fa... 107 1e-22
UniRef50_A2DJL3 Cluster: Clathrin adaptor complex small chain fa... 107 1e-22
UniRef50_P53680 Cluster: AP-2 complex subunit sigma-1; n=34; Euk... 102 7e-21
UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18; Eukar... 101 9e-21
UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-... 100 2e-20
UniRef50_UPI000065D2A5 Cluster: Homolog of Homo sapiens "Adapter... 99 4e-20
UniRef50_Q5K720 Cluster: Vesicle-mediated transport-related prot... 97 3e-19
UniRef50_Q9Y587 Cluster: AP-4 complex subunit sigma-1; n=38; Euk... 95 1e-18
UniRef50_A3FQ07 Cluster: Clathrin assembly protein, putative; n=... 89 7e-17
UniRef50_A4S425 Cluster: Predicted protein; n=5; Viridiplantae|R... 89 9e-17
UniRef50_Q00381 Cluster: AP-2 complex subunit sigma; n=6; Saccha... 89 9e-17
UniRef50_Q4N574 Cluster: Clathrin assembly protein, putative; n=... 87 2e-16
UniRef50_Q4TBT4 Cluster: Chromosome undetermined SCAF7089, whole... 86 5e-16
UniRef50_A4S927 Cluster: Predicted protein; n=1; Ostreococcus lu... 86 6e-16
UniRef50_Q4SV83 Cluster: Chromosome 1 SCAF13775, whole genome sh... 82 8e-15
UniRef50_Q6MY93 Cluster: Clathrin coat assembly protein, putativ... 82 8e-15
UniRef50_Q00ZM0 Cluster: Putative clathrin assembly protein; n=1... 82 1e-14
UniRef50_A7PUU9 Cluster: Chromosome chr4 scaffold_32, whole geno... 79 1e-13
UniRef50_Q9FZG3 Cluster: T2E6.6; n=1; Arabidopsis thaliana|Rep: ... 77 3e-13
UniRef50_Q4E2V0 Cluster: Clathrin assembly sigma-adaptin protein... 60 3e-13
UniRef50_Q10PM8 Cluster: Clathrin adaptor complex small chain fa... 77 4e-13
UniRef50_UPI000066001F Cluster: AP-1 complex subunit sigma-1A (A... 75 9e-13
UniRef50_Q92572 Cluster: AP-3 complex subunit sigma-1; n=48; Eut... 75 2e-12
UniRef50_Q7QSS7 Cluster: GLP_127_35802_36245; n=2; Giardia intes... 73 4e-12
UniRef50_Q4XN90 Cluster: Adaptor-related protein complex 3, sigm... 73 6e-12
UniRef50_Q09905 Cluster: AP-3 complex subunit sigma; n=4; Fungi/... 73 6e-12
UniRef50_Q4QAH7 Cluster: Adaptor complex AP-3 small subunit, put... 72 8e-12
UniRef50_UPI0000DA1D00 Cluster: PREDICTED: similar to AP-3 compl... 71 2e-11
UniRef50_UPI0000E2384D Cluster: PREDICTED: similar to Adaptor-re... 70 3e-11
UniRef50_Q4YX62 Cluster: Clathrin coat assembly protein, putativ... 70 3e-11
UniRef50_Q5KFS7 Cluster: Golgi to vacuole transport-related prot... 70 4e-11
UniRef50_Q0J5W7 Cluster: Os08g0395300 protein; n=2; Oryza sativa... 69 1e-10
UniRef50_Q1EQ11 Cluster: Sigma subunit isoform 3; n=1; Entamoeba... 68 2e-10
UniRef50_P47064 Cluster: AP-3 complex subunit sigma; n=12; Sacch... 66 7e-10
UniRef50_A6SQM4 Cluster: Putative uncharacterized protein; n=2; ... 64 2e-09
UniRef50_O13562 Cluster: Putative uncharacterized protein YLR171... 60 5e-08
UniRef50_UPI000155E0E1 Cluster: PREDICTED: similar to clathrin-a... 58 1e-07
UniRef50_A0E8B6 Cluster: Chromosome undetermined scaffold_82, wh... 58 1e-07
UniRef50_Q00TI3 Cluster: Clathrin adaptor complex, small subunit... 58 2e-07
UniRef50_A2DEN6 Cluster: Clathrin adaptor complex small chain fa... 58 2e-07
UniRef50_A6R6G2 Cluster: AP-3 complex subunit sigma; n=14; Peziz... 58 2e-07
UniRef50_Q8SRF9 Cluster: ADAPTIN SMALL SUBUNIT; n=1; Encephalito... 56 4e-07
UniRef50_Q1EQ10 Cluster: Sigma subunit isoform 4; n=1; Entamoeba... 55 1e-06
UniRef50_Q24CG2 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_A2DE49 Cluster: Clathrin adaptor complex small chain fa... 54 3e-06
UniRef50_A7EY37 Cluster: Putative uncharacterized protein; n=1; ... 40 2e-04
UniRef50_Q6CIZ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 48 2e-04
UniRef50_A3ANY1 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q5CU86 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_A3AC67 Cluster: Putative uncharacterized protein; n=3; ... 39 0.072
UniRef50_UPI0000D67F79 Cluster: PREDICTED: similar to Chain M, A... 38 0.17
UniRef50_Q4SPT3 Cluster: Chromosome 7 SCAF14536, whole genome sh... 38 0.17
UniRef50_UPI0000583F86 Cluster: PREDICTED: similar to MGC81080 p... 37 0.29
UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putativ... 37 0.29
UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.39
UniRef50_Q57YR2 Cluster: Mu-adaptin 4, putative; n=3; Trypanosom... 36 0.51
UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6; A... 36 0.51
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 36 0.51
UniRef50_A3B0G8 Cluster: Putative uncharacterized protein; n=2; ... 36 0.68
UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=... 36 0.68
UniRef50_Q5KLY0 Cluster: Adaptor complex subunit medium chain 3,... 36 0.89
UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23; Eukaryot... 36 0.89
UniRef50_Q4RPG4 Cluster: Chromosome 12 SCAF15007, whole genome s... 35 1.2
UniRef50_Q5C0S1 Cluster: SJCHGC06381 protein; n=1; Schistosoma j... 35 1.6
UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba ... 34 2.7
UniRef50_Q2HFU3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q22S17 Cluster: Nonclathrin coat protein zeta2-cop-rela... 33 3.6
UniRef50_Q5DAA0 Cluster: SJCHGC02081 protein; n=1; Schistosoma j... 33 4.8
UniRef50_A5K403 Cluster: Clathrin coat assembly protein AP50, pu... 33 4.8
UniRef50_Q95WT5 Cluster: Homeobox Hx; n=1; Branchiostoma florida... 33 6.3
UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family... 33 6.3
UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94; Fungi/... 33 6.3
UniRef50_Q3F0C8 Cluster: Transcriptional regulator, TetR family;... 32 8.3
UniRef50_A2DK67 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_A7E9J0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1; Schizosac... 32 8.3
>UniRef50_Q9DB50 Cluster: AP-1 complex subunit sigma-2; n=24;
Eukaryota|Rep: AP-1 complex subunit sigma-2 - Mus
musculus (Mouse)
Length = 160
Score = 179 bits (436), Expect = 4e-44
Identities = 78/97 (80%), Positives = 91/97 (93%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ TREL+ TVLARKPKMCSFLEW+D+K+VYKRYASLYFCCA+E +DNEL+TLE+IHRY
Sbjct: 27 KKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRY 86
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VELLDKYFG VCELDIIFNFEKAYFILD++ LGG +Q
Sbjct: 87 VELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQ 123
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +2
Query: 167 MQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MQFMLLFSRQGKLRLQKWYV D + PK L + LK+ K
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK 59
>UniRef50_P61966 Cluster: AP-1 complex subunit sigma-1A; n=109;
Eukaryota|Rep: AP-1 complex subunit sigma-1A - Homo
sapiens (Human)
Length = 158
Score = 173 bits (422), Expect = 2e-42
Identities = 76/97 (78%), Positives = 89/97 (91%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
+++ REL+ VLARKPKMCSFLEW+D+KVVYKRYASLYFCCA+E +DNEL+TLELIHRY
Sbjct: 28 RKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRY 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VELLDKYFG VCELDIIFNFEKAYFILD++ +GG +Q
Sbjct: 88 VELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQ 124
Score = 49.2 bits (112), Expect = 7e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MM+FMLLFSRQGKLRLQKWY+A D + PK L + LK+ K
Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60
>UniRef50_O23685 Cluster: Clathrin assembly protein AP19 homolog;
n=13; Eukaryota|Rep: Clathrin assembly protein AP19
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 162
Score = 140 bits (339), Expect = 2e-32
Identities = 61/97 (62%), Positives = 76/97 (78%)
Frame = +1
Query: 259 RELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLD 438
REL +L R PK+C+F+EW+ KVVYKRYASLYFC ++QEDNEL LE+IH YVE+LD
Sbjct: 33 RELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILD 92
Query: 439 KYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPVK 549
+YFG VCELD+IFNF KAY+ILD+ + G LQ + K
Sbjct: 93 RYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKK 129
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWY 223
M+ F+LL SRQGK+RL KWY
Sbjct: 1 MIHFVLLVSRQGKVRLTKWY 20
>UniRef50_Q6CIZ2 Cluster: Similar to sp|P35181 Saccharomyces
cerevisiae YLR170c APS1 AP-1 complex subunit; n=2;
Saccharomycetales|Rep: Similar to sp|P35181
Saccharomyces cerevisiae YLR170c APS1 AP-1 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 156
Score = 125 bits (302), Expect = 6e-28
Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQE-DNELLTLELIHR 420
K + RE+ T VL+RK KMC+ LE++D KVVYK+YASLYF ++ + DNELLTLE+IHR
Sbjct: 30 KHKILREVTTNVLSRKSKMCNILEYQDHKVVYKKYASLYFIAGIDLDSDNELLTLEIIHR 89
Query: 421 YVELLDKYFGXVCELDIIFNFEKAYFILDDWFL 519
+VE +D+YFG VCELDIIFNF KAY ILD+ +
Sbjct: 90 FVETMDRYFGNVCELDIIFNFSKAYSILDEMIM 122
>UniRef50_A4S3Y4 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 155
Score = 124 bits (299), Expect = 1e-27
Identities = 53/99 (53%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +1
Query: 244 KEEKT--RELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIH 417
KE K R++ + ++ R K+C+ +E++DVK+VY++YASLYFC A+++ NEL TLE+I
Sbjct: 26 KERKRIERDVTSRIIPRANKLCNVVEYRDVKLVYRKYASLYFCLAVDRGANELATLEMIQ 85
Query: 418 RYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
YVE+LDKYFG VCELD++FNF KA+++LD+ F+ G LQ
Sbjct: 86 HYVEILDKYFGNVCELDLVFNFHKAHYVLDEVFIAGHLQ 124
Score = 32.7 bits (71), Expect = 6.3
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYV 226
M++F LLFS+Q K+RL K+YV
Sbjct: 1 MIRFALLFSKQAKIRLSKYYV 21
>UniRef50_P35181 Cluster: AP-1 complex subunit theta-1
(Theta(1)-adaptin); n=22; Eukaryota|Rep: AP-1 complex
subunit theta-1 (Theta(1)-adaptin) - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 123 bits (296), Expect = 3e-27
Identities = 57/93 (61%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQE-DNELLTLELIHR 420
K + ++L T+LARKPKMC+ +E+ D KVVYKRYASLYF M + DNELLTLE+IHR
Sbjct: 30 KAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKRYASLYFIVGMTPDVDNELLTLEIIHR 89
Query: 421 YVELLDKYFGXVCELDIIFNFEKAYFILDDWFL 519
+VE +D YFG VCELDIIFNF K Y IL++ +
Sbjct: 90 FVETMDTYFGNVCELDIIFNFSKVYDILNEMIM 122
Score = 35.9 bits (79), Expect = 0.68
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +2
Query: 167 MQFMLLFSRQGKLRLQKWYVA 229
++++LL SRQGK+RL+KWY A
Sbjct: 4 LKYLLLVSRQGKIRLKKWYTA 24
>UniRef50_Q5CVH4 Cluster: Aps1p/AP17 like clathrin adaptor protein;
n=3; Apicomplexa|Rep: Aps1p/AP17 like clathrin adaptor
protein - Cryptosporidium parvum Iowa II
Length = 201
Score = 122 bits (295), Expect = 5e-27
Identities = 52/97 (53%), Positives = 73/97 (75%)
Frame = +1
Query: 259 RELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLD 438
+E+ ++ R+ K+C+F++WK +V KRYASLYF +++ DNELL LE+IH YVE+LD
Sbjct: 52 KEVTQMIINRQGKLCNFIDWKGHTLVVKRYASLYFVACIDKNDNELLALEIIHHYVEVLD 111
Query: 439 KYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPVK 549
+YFG VCELD+IFNF KAYFILD+ L G ++ + K
Sbjct: 112 RYFGNVCELDLIFNFHKAYFILDEIILAGEIEESSKK 148
Score = 36.3 bits (80), Expect = 0.51
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 158 VKMMQFMLLFSRQGKLRLQKWYVAH 232
V M +F LL SRQGK RL+KWY ++
Sbjct: 18 VIMFRFFLLISRQGKTRLEKWYSSY 42
>UniRef50_Q54WW3 Cluster: Clathrin-adaptor small chain; n=1;
Dictyostelium discoideum AX4|Rep: Clathrin-adaptor small
chain - Dictyostelium discoideum AX4
Length = 156
Score = 114 bits (274), Expect = 2e-24
Identities = 48/103 (46%), Positives = 74/103 (71%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K TRE++ VL+R PK C+F++W++ +VY+R+ASL+F + DNEL+TLE I R+
Sbjct: 28 KNRATREVMNQVLSRSPKFCNFVQWREFTIVYQRFASLFFVMVTDSTDNELVTLESIQRF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPVKK 552
V +LD FG +CELD+I+ F++AY +LD++ L G LQ + K+
Sbjct: 88 VVVLDIVFGNICELDLIYEFQRAYQVLDEFLLTGHLQESSSKE 130
>UniRef50_Q4UHU1 Cluster: Clathrin assembly protein, putative; n=2;
Theileria|Rep: Clathrin assembly protein, putative -
Theileria annulata
Length = 152
Score = 111 bits (268), Expect = 8e-24
Identities = 49/96 (51%), Positives = 69/96 (71%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K ++L V+ R K C+FLEW++ KVV+KR+ASLYF ++++ NELL LE+I RY
Sbjct: 28 KSSIIQDLSHMVVNRSLKQCNFLEWREYKVVFKRFASLYFIACVDKDANELLILEMIQRY 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXL 531
VE+LD YF VCELD++FNF KAY +LD+ + G +
Sbjct: 88 VEILDSYFCNVCELDLVFNFTKAYHLLDEILIDGDI 123
>UniRef50_Q7Z1E2 Cluster: Clathrin assembly protein AP19-like
protein; n=6; Trypanosomatidae|Rep: Clathrin assembly
protein AP19-like protein - Trypanosoma cruzi
Length = 167
Score = 110 bits (264), Expect = 3e-23
Identities = 47/97 (48%), Positives = 69/97 (71%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K + RE L R + + +E + K + +RYASLYF +++++DNEL+ LE+IH +
Sbjct: 28 KAKLVREACQLALGRSARFSNVIEHRGSKYICRRYASLYFVASIDKDDNELIVLEVIHHF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VE+LD+YFG VCELD+IFNF +AYF+LD+ LGG L+
Sbjct: 88 VEVLDRYFGNVCELDLIFNFHRAYFVLDEVILGGELE 124
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHP 235
M++++LL SRQGKLRL KWYVA+P
Sbjct: 1 MIKYLLLISRQGKLRLAKWYVAYP 24
>UniRef50_A2E7J4 Cluster: Clathrin adaptor complex small chain
family protein; n=3; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 152
Score = 107 bits (258), Expect = 1e-22
Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Frame = +1
Query: 241 AKEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHR 420
+K++ TRE+ +L+R C+F+EW+D K+VY RYASLYF ++ DNE + L+ IH
Sbjct: 27 SKDKITREVSNAILSRPANFCTFIEWRDRKLVYNRYASLYFVMCVDVNDNESMMLDAIHF 86
Query: 421 YVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXL----QVNPVK 549
YVE LD +FG V E+DIIF F AY +LD+ L G +VNP++
Sbjct: 87 YVETLDAFFGNVREVDIIFGFHYAYMLLDEIILAGEFVESSRVNPIQ 133
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWY 223
M+ F L+F+RQGK RL KWY
Sbjct: 1 MIHFFLVFNRQGKARLSKWY 20
>UniRef50_A2DJL3 Cluster: Clathrin adaptor complex small chain
family protein; n=1; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 153
Score = 107 bits (258), Expect = 1e-22
Identities = 51/117 (43%), Positives = 71/117 (60%)
Frame = +1
Query: 199 QIEASEVVRGSSR*AKEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAME 378
++ S+ S+ K T+E+ VL R C F+EW+D K+VY RYASLYF A +
Sbjct: 13 KVRISKWYSAISQREKNAITKEVTRLVLRRPQNHCQFVEWRDSKIVYTRYASLYFLFAAD 72
Query: 379 QEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPVK 549
DNE+ L+LI +VE LD++FG CE+DIIF+F Y +LD+ LGG + VK
Sbjct: 73 ASDNEIFVLDLIQFFVEALDQFFGNACEIDIIFSFYYVYMLLDEMILGGEVFETSVK 129
Score = 34.7 bits (76), Expect = 1.6
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVA 229
M+QF+L+F++ GK+R+ KWY A
Sbjct: 1 MIQFVLMFNKAGKVRISKWYSA 22
>UniRef50_P53680 Cluster: AP-2 complex subunit sigma-1; n=34;
Eukaryota|Rep: AP-2 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 142
Score = 102 bits (244), Expect = 7e-21
Identities = 42/97 (43%), Positives = 66/97 (68%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ E+ V R K +F+E+++ K++Y+RYA LYFC ++ DN L LE IH +
Sbjct: 28 KQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VE+L++YF VCELD++FNF K Y ++D+ FL G ++
Sbjct: 88 VEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIR 124
>UniRef50_Q9Y7L6 Cluster: AP-2 complex subunit sigma; n=18;
Eukaryota|Rep: AP-2 complex subunit sigma -
Schizosaccharomyces pombe (Fission yeast)
Length = 143
Score = 101 bits (243), Expect = 9e-21
Identities = 43/76 (56%), Positives = 58/76 (76%)
Frame = +1
Query: 304 SFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNF 483
+FLEW++ K+VY+RYA LYFC ++ DN+L LE+IH +VE+LD +FG VCELD+IFNF
Sbjct: 49 NFLEWENSKLVYRRYAGLYFCFCVDSTDNDLAILEMIHFFVEILDSFFGNVCELDLIFNF 108
Query: 484 EKAYFILDDWFLGGXL 531
K ILD+ LGG +
Sbjct: 109 YKVSAILDEIILGGEI 124
>UniRef50_A0A1F7 Cluster: Clathrin-associated adaptor complex AP-1
small chain sigma 1; n=1; Porphyra yezoensis|Rep:
Clathrin-associated adaptor complex AP-1 small chain
sigma 1 - Porphyra yezoensis
Length = 187
Score = 100 bits (240), Expect = 2e-20
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 328 KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILD 507
K++Y+RYASLYF + DNEL LE +H YVE LDKYFG VCELD+IFNF++AYF+ D
Sbjct: 79 KLIYRRYASLYFVLCISDGDNELSALETVHLYVESLDKYFGHVCELDVIFNFDRAYFLAD 138
Query: 508 DWFLGGXLQ 534
+ LGG LQ
Sbjct: 139 ELLLGGHLQ 147
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVA 229
MM +M+L SRQGK+RL KW+ A
Sbjct: 1 MMHWMMLISRQGKVRLSKWFDA 22
>UniRef50_UPI000065D2A5 Cluster: Homolog of Homo sapiens
"Adapter-related protein complex 1 sigma 1B subunit;
n=2; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Adapter-related protein complex 1 sigma 1B subunit -
Takifugu rubripes
Length = 241
Score = 99 bits (238), Expect = 4e-20
Identities = 53/87 (60%), Positives = 59/87 (67%), Gaps = 23/87 (26%)
Frame = +1
Query: 343 RYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFG-----------------------X 453
RYASLYFCCA+E +DNEL+TLE+IHRYVELLDKYFG
Sbjct: 121 RYASLYFCCAVEDQDNELITLEIIHRYVELLDKYFGSVGFCLFYVAILASGFLMCYCEQQ 180
Query: 454 VCELDIIFNFEKAYFILDDWFLGGXLQ 534
VCELDIIFNFEKAYFILD++ LGG Q
Sbjct: 181 VCELDIIFNFEKAYFILDEFLLGGEAQ 207
Score = 63.3 bits (147), Expect = 4e-09
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRY 348
K++ TREL+ T+LARKPKMCSFLEW+D+K+VYKR+
Sbjct: 27 KKKITRELVQTILARKPKMCSFLEWRDLKIVYKRW 61
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +2
Query: 167 MQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MQFMLLFSRQGKLRLQKWYV D + PK L + LK+ K
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTILARKPKMCSFLEWRDLKIVYK 59
>UniRef50_Q5K720 Cluster: Vesicle-mediated transport-related
protein, putative; n=7; Dikarya|Rep: Vesicle-mediated
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 215
Score = 96.7 bits (230), Expect = 3e-19
Identities = 40/77 (51%), Positives = 58/77 (75%)
Frame = +1
Query: 304 SFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNF 483
+F+E++D KV+Y+RYA L+FC ++ DNEL LE IH +VE+LD +F VCELD++F+F
Sbjct: 121 NFVEFRDDKVIYRRYAGLFFCVCVDSNDNELAYLEAIHLFVEVLDAFFQNVCELDLVFSF 180
Query: 484 EKAYFILDDWFLGGXLQ 534
K Y ILD+ FL G ++
Sbjct: 181 YKVYAILDEVFLAGEIE 197
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPD 238
M++F+L+ +RQGK RL KWY + D
Sbjct: 73 MIKFILVQNRQGKTRLSKWYAPYDD 97
>UniRef50_Q9Y587 Cluster: AP-4 complex subunit sigma-1; n=38;
Eukaryota|Rep: AP-4 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 144
Score = 95.1 bits (226), Expect = 1e-18
Identities = 39/90 (43%), Positives = 62/90 (68%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDK 441
E+I + L+R + CSF+E+KD K++Y++YA+L+ + +NE+ E IH +VE+LD+
Sbjct: 34 EVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDE 93
Query: 442 YFGXVCELDIIFNFEKAYFILDDWFLGGXL 531
YF V ELDI+FN +K + ILD+ L G +
Sbjct: 94 YFSRVSELDIMFNLDKVHIILDEMVLNGCI 123
>UniRef50_A3FQ07 Cluster: Clathrin assembly protein, putative; n=4;
Apicomplexa|Rep: Clathrin assembly protein, putative -
Cryptosporidium parvum Iowa II
Length = 158
Score = 89.0 bits (211), Expect = 7e-17
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQED-NELLTLELIHRYVELLD 438
+LI L + C F+E+ + K+V++RYASLYF +E + NEL ELIH VE LD
Sbjct: 34 QLIRKCLLKGENQCPFIEFNNYKIVFRRYASLYFIMGLENSNTNELSYYELIHFIVETLD 93
Query: 439 KYFGXVCELDIIFNFEKAYFILDDWFLGGXL 531
KYF VCELDI+FN +KA+ I+++ + G +
Sbjct: 94 KYFENVCELDIMFNLDKAHIIIEEIIMCGRI 124
>UniRef50_A4S425 Cluster: Predicted protein; n=5; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 144
Score = 88.6 bits (210), Expect = 9e-17
Identities = 38/87 (43%), Positives = 58/87 (66%)
Frame = +1
Query: 265 LITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKY 444
++ +AR C+F+E ++ V+Y+RYASLYF E E+NEL LE +H VE LD++
Sbjct: 30 IVRRCIARGADECAFVEHREYTVIYRRYASLYFVVGCEGEENELAMLEFVHGVVETLDRH 89
Query: 445 FGXVCELDIIFNFEKAYFILDDWFLGG 525
FG VCELDI+ + +K Y +L++ + G
Sbjct: 90 FGNVCELDIMMHLDKVYCMLEEMVMCG 116
>UniRef50_Q00381 Cluster: AP-2 complex subunit sigma; n=6;
Saccharomycetales|Rep: AP-2 complex subunit sigma -
Saccharomyces cerevisiae (Baker's yeast)
Length = 147
Score = 88.6 bits (210), Expect = 9e-17
Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +1
Query: 304 SFLEWKD-VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFN 480
+F+E+ D K++Y+RYA LYF ++ D+E + L IH +VE+LD +FG VCELDI+FN
Sbjct: 52 NFVEFSDSTKLIYRRYAGLYFVMGVDLLDDEPIYLCHIHLFVEVLDAFFGNVCELDIVFN 111
Query: 481 FEKAYFILDDWFLGGXLQ 534
F K Y I+D+ F+GG +Q
Sbjct: 112 FYKVYMIMDEMFIGGEIQ 129
>UniRef50_Q4N574 Cluster: Clathrin assembly protein, putative; n=3;
Piroplasmida|Rep: Clathrin assembly protein, putative -
Theileria parva
Length = 160
Score = 87.4 bits (207), Expect = 2e-16
Identities = 40/96 (41%), Positives = 61/96 (63%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K+ ++ T +L R + + + + +KVVY++Y+ L C ++Q DN L ELIH
Sbjct: 28 KKSLEDKIHTELLNRDRRWSNVFDLEGMKVVYRQYSGLIICVLIDQSDNTLAIYELIHLI 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXL 531
VE+LD Y+G VCELDI++NF + + ILDD LGG +
Sbjct: 88 VEVLDVYYGDVCELDIVYNFNRVHNILDDIVLGGEI 123
>UniRef50_Q4TBT4 Cluster: Chromosome undetermined SCAF7089, whole
genome shotgun sequence; n=3; Euteleostomi|Rep:
Chromosome undetermined SCAF7089, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 170
Score = 86.2 bits (204), Expect = 5e-16
Identities = 35/75 (46%), Positives = 53/75 (70%)
Frame = +1
Query: 301 CSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFN 480
CSF+E+KD K+V+++YA+L+ + +NEL EL+H +VE+LDKYF V ELDI+FN
Sbjct: 74 CSFVEYKDFKLVFRQYAALFIVVGISDGENELAVYELVHNFVEVLDKYFSRVSELDIMFN 133
Query: 481 FEKAYFILDDWFLGG 525
++ + ILD+ G
Sbjct: 134 LDRVHIILDEMIQNG 148
>UniRef50_A4S927 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 160
Score = 85.8 bits (203), Expect = 6e-16
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
Frame = +1
Query: 277 VLARKPKMCSFLEWK-----DVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDK 441
V R +CSF++ + D K+VY+ +A+LYFC ++ ++EL L+LI YVE LD+
Sbjct: 39 VTGRPDHLCSFVDDEKTFGPDTKLVYRHFATLYFCILSDRSESELAMLDLIQVYVETLDR 98
Query: 442 YFGXVCELDIIFNFEKAYFILDDWFLGG-XLQVNPVK 549
F VCELD+IFN KAY +LD+ +GG L++N K
Sbjct: 99 VFENVCELDLIFNSPKAYTVLDETIVGGLVLEINTNK 135
>UniRef50_Q4SV83 Cluster: Chromosome 1 SCAF13775, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF13775, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 265
Score = 82.2 bits (194), Expect = 8e-15
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 322 DVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVC 459
+ + +K+YASLYFCCA+E +DNEL+TLE+IHRYVELLDKYFG VC
Sbjct: 112 NTRAPFKQYASLYFCCAVEDQDNELITLEIIHRYVELLDKYFGSVC 157
Score = 66.1 bits (154), Expect = 6e-10
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASL 357
K++ TREL+ T+LARKPKMCSFLEW+D+K+VYKR+A L
Sbjct: 27 KKKITRELVQTILARKPKMCSFLEWRDLKIVYKRWARL 64
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 454 VCELDIIFNFEKAYFILDDWFLGGXLQ 534
VCELDIIFNFEKAYFILD++ LGG Q
Sbjct: 205 VCELDIIFNFEKAYFILDEFLLGGEAQ 231
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +2
Query: 167 MQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MQFMLLFSRQGKLRLQKWYV D + PK L + LK+ K
Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTILARKPKMCSFLEWRDLKIVYK 59
>UniRef50_Q6MY93 Cluster: Clathrin coat assembly protein, putative;
n=1; Aspergillus fumigatus|Rep: Clathrin coat assembly
protein, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 177
Score = 82.2 bits (194), Expect = 8e-15
Identities = 35/63 (55%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +1
Query: 304 SFLEWK-DVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFN 480
+F+E+K K+VY+RYA L+FC ++ DNEL LE IH +VE+LD++FG VCELD++FN
Sbjct: 75 NFVEFKRSTKIVYRRYAGLFFCVCVDATDNELAYLEAIHFFVEVLDQFFGNVCELDLVFN 134
Query: 481 FEK 489
F K
Sbjct: 135 FYK 137
>UniRef50_Q00ZM0 Cluster: Putative clathrin assembly protein; n=1;
Ostreococcus tauri|Rep: Putative clathrin assembly
protein - Ostreococcus tauri
Length = 109
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +1
Query: 229 SSR*AKEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLE 408
+ R A+ + E++ LAR K CSF+E ++ K+ Y+RYASL+F + E+NEL LE
Sbjct: 25 TERSARNQLEGEIVRRCLARGAKECSFVEHREFKLAYRRYASLFFIVGCDGEENELAMLE 84
Query: 409 LIHRYVELLDKYFGXVCELDII 474
H VE LD++FG VCELDI+
Sbjct: 85 FAHCAVETLDRHFGNVCELDIM 106
>UniRef50_A7PUU9 Cluster: Chromosome chr4 scaffold_32, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 202
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLE-----WKDVKVVYKRYASLYFCCAMEQEDNELLTLE 408
++E R + + +R + +F+E D ++VYK YA+LYF + +NEL L+
Sbjct: 28 QQELIRRVFGVLCSRAENVSNFVEADSVFGPDTRLVYKHYATLYFVFVFDSSENELAMLD 87
Query: 409 LIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
LI VE LDK F VCELDI+FN+ K + ILD+ GG
Sbjct: 88 LIQVLVETLDKCFKNVCELDIVFNYSKLHTILDEIIFGG 126
>UniRef50_Q9FZG3 Cluster: T2E6.6; n=1; Arabidopsis thaliana|Rep:
T2E6.6 - Arabidopsis thaliana (Mouse-ear cress)
Length = 167
Score = 77.0 bits (181), Expect = 3e-13
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +1
Query: 295 KMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDII 474
++C F ++ KV+Y+RYA L+F ++ DNEL LE IH +VE+LD +F VCELD++
Sbjct: 57 EVCCFHFFRTHKVIYRRYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLV 116
Query: 475 FNFEKAYFIL 504
FNF K IL
Sbjct: 117 FNFHKNSHIL 126
>UniRef50_Q4E2V0 Cluster: Clathrin assembly sigma-adaptin protein
complex 4, putative; n=3; Trypanosoma|Rep: Clathrin
assembly sigma-adaptin protein complex 4, putative -
Trypanosoma cruzi
Length = 185
Score = 60.5 bits (140), Expect(2) = 3e-13
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 382 EDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXL 531
E+ EL E IH VE DKYF VCELD++FN EKA+FIL++ + G +
Sbjct: 114 EEGELAIYEFIHLVVETFDKYFENVCELDVMFNVEKAHFILEEMLVNGGI 163
Score = 36.7 bits (81), Expect(2) = 3e-13
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQE 384
E++ L R+ CSF+E K++Y+RYAS++F ++ +
Sbjct: 35 EVVRKCLQRRESDCSFVEHLHYKLIYRRYASIFFIVGIKNK 75
>UniRef50_Q10PM8 Cluster: Clathrin adaptor complex small chain
family protein, expressed; n=7; Oryza sativa|Rep:
Clathrin adaptor complex small chain family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 76.6 bits (180), Expect = 4e-13
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +1
Query: 328 KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILD 507
K+VYK A+LYF + +NEL L+L+ +VE LD+ F VCELDI+FNF K + ILD
Sbjct: 61 KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNKLHTILD 120
Query: 508 DWFLGG 525
+ LGG
Sbjct: 121 EMILGG 126
>UniRef50_UPI000066001F Cluster: AP-1 complex subunit sigma-1A
(Adapter-related protein complex 1 sigma-1A subunit)
(Sigma-adaptin 1A) (Adaptor protein complex AP-1
sigma-1A subunit) (Golgi adaptor HA1/AP1 adaptin
sigma-1A subunit) (Clathrin assembly protein complex 1
sigma-1A small chai; n=1; Takifugu rubripes|Rep: AP-1
complex subunit sigma-1A (Adapter-related protein
complex 1 sigma-1A subunit) (Sigma-adaptin 1A) (Adaptor
protein complex AP-1 sigma-1A subunit) (Golgi adaptor
HA1/AP1 adaptin sigma-1A subunit) (Clathrin assembly
protein complex 1 sigma-1A small chai - Takifugu
rubripes
Length = 217
Score = 75.4 bits (177), Expect = 9e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +1
Query: 247 EEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYV 426
++KT E ++ + K C + YASLYFCCA+E++DNEL+TLE+IHR+V
Sbjct: 63 QKKTLECVSACV----KACEGASREGFPAAEGEYASLYFCCAIEEQDNELITLEVIHRFV 118
Query: 427 ELLDKYFGXVCELDIIFNFEKAY 495
ELLDKYFG V F F +
Sbjct: 119 ELLDKYFGSVSNWLFFFFFSSNF 141
Score = 59.7 bits (138), Expect = 5e-08
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKR 345
K++ REL+ VLARKPKMCSFLEWKD+K+VYKR
Sbjct: 27 KKKMVRELMQIVLARKPKMCSFLEWKDLKIVYKR 60
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = +2
Query: 167 MQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
M+FMLLFSRQGKLRLQKWY A + + PK L K LK+ K
Sbjct: 1 MRFMLLFSRQGKLRLQKWYTATAERDKKKMVRELMQIVLARKPKMCSFLEWKDLKIVYK 59
>UniRef50_Q92572 Cluster: AP-3 complex subunit sigma-1; n=48;
Euteleostomi|Rep: AP-3 complex subunit sigma-1 - Homo
sapiens (Human)
Length = 193
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEW------KDVKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ RE V R +C+FLE D K++Y+ YA+LYF ++ ++EL L
Sbjct: 28 QQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGIL 87
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+LI +VE LDK F VCELD+IF+ +K + IL + +GG
Sbjct: 88 DLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGG 127
>UniRef50_Q7QSS7 Cluster: GLP_127_35802_36245; n=2; Giardia
intestinalis|Rep: GLP_127_35802_36245 - Giardia lamblia
ATCC 50803
Length = 147
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +1
Query: 268 ITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYF 447
I TV ++W ++ ++YA L A+E DN+LL E+IH + LD+YF
Sbjct: 36 IRTVKLHASLSNGIIDWDRGSLILRQYADLTIVFAVENSDNKLLAHEMIHFFATCLDRYF 95
Query: 448 GXVCELDIIFNFEKAYFILDDWFLGG 525
G V ELD+IFN+ KAY +LD+ + G
Sbjct: 96 GGVSELDLIFNYLKAYHVLDEIIMNG 121
>UniRef50_Q4XN90 Cluster: Adaptor-related protein complex 3, sigma 2
subunit, putative; n=5; Plasmodium|Rep: Adaptor-related
protein complex 3, sigma 2 subunit, putative -
Plasmodium chabaudi
Length = 157
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/107 (35%), Positives = 69/107 (64%), Gaps = 7/107 (6%)
Frame = +1
Query: 226 GSSR*AKEEKTRELITTVLARKP--KMCSFLEWK-----DVKVVYKRYASLYFCCAMEQE 384
GSS K++ + I ++ ++P + C F++ + DVKVVY+ +A+L+F ++
Sbjct: 22 GSSH-EKQQLITKKIHEIIIKRPSNECCCFIDSEELLGSDVKVVYRHFATLFFIFIIDSM 80
Query: 385 DNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
++EL L+LI +V++LD F VCELD+++N+E+ +ILD+ +GG
Sbjct: 81 ESELGILDLIQVFVQVLDVNFENVCELDLVYNYEQINYILDEIVMGG 127
>UniRef50_Q09905 Cluster: AP-3 complex subunit sigma; n=4;
Fungi/Metazoa group|Rep: AP-3 complex subunit sigma -
Schizosaccharomyces pombe (Fission yeast)
Length = 165
Score = 72.5 bits (170), Expect = 6e-12
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDV----KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVE 429
++ V R P C+FLE + +++Y++YA+LYF +++ ++EL L+LI +VE
Sbjct: 34 DIYAAVSTRPPTACNFLESNLIAGKNRIIYRQYATLYFVFVVDEGESELGILDLIQVFVE 93
Query: 430 LLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
LD+ F VCELD++F F++ + IL + GG
Sbjct: 94 ALDRCFNNVCELDLVFKFQEIHAILAEVVSGG 125
>UniRef50_Q4QAH7 Cluster: Adaptor complex AP-3 small subunit,
putative; n=6; Trypanosomatidae|Rep: Adaptor complex
AP-3 small subunit, putative - Leishmania major
Length = 166
Score = 72.1 bits (169), Expect = 8e-12
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFL----EWK--DVKVVYKRYASLYFCCAMEQEDNELLTL 405
++E R + + R +C+F+ EW D +V+Y+RYA+L F + +++L L
Sbjct: 29 QQELVRSIHRAIARRGDALCNFVDNFKEWPTPDTRVIYRRYATLCFVFVTDSSESQLAIL 88
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+LI +VE LD+ F VCELD+IF+ EK + L + +GG
Sbjct: 89 DLIQVFVESLDRTFENVCELDLIFHSEKVQYTLMEMIMGG 128
>UniRef50_UPI0000DA1D00 Cluster: PREDICTED: similar to AP-3 complex
subunit sigma-2 (Adapter-related protein complex 3
sigma-2 subunit) (Sigma-adaptin 3b) (AP-3 complex
sigma-3B subunit) (Sigma-3B-adaptin); n=1; Rattus
norvegicus|Rep: PREDICTED: similar to AP-3 complex
subunit sigma-2 (Adapter-related protein complex 3
sigma-2 subunit) (Sigma-adaptin 3b) (AP-3 complex
sigma-3B subunit) (Sigma-3B-adaptin) - Rattus norvegicus
Length = 223
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEW------KDVKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ RE VL R +C+FLE D K++Y+ YA+LYF ++ ++EL L
Sbjct: 8 QQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGIL 67
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEK 489
+LI +VE LDK F VCELD+IF+ +K
Sbjct: 68 DLIQVFVETLDKCFENVCELDLIFHMDK 95
>UniRef50_UPI0000E2384D Cluster: PREDICTED: similar to
Adaptor-related protein complex 4, sigma 1 subunit
isoform 1; n=2; Eutheria|Rep: PREDICTED: similar to
Adaptor-related protein complex 4, sigma 1 subunit
isoform 1 - Pan troglodytes
Length = 135
Score = 70.1 bits (164), Expect = 3e-11
Identities = 28/69 (40%), Positives = 47/69 (68%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDK 441
E+I + L+R + CSF+E+KD K++Y++YA+L+ + +NE+ E IH +VE+LD+
Sbjct: 34 EVIKSCLSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDE 93
Query: 442 YFGXVCELD 468
YF V +D
Sbjct: 94 YFSRVEPID 102
>UniRef50_Q4YX62 Cluster: Clathrin coat assembly protein, putative;
n=5; Plasmodium|Rep: Clathrin coat assembly protein,
putative - Plasmodium berghei
Length = 141
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKM-CSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHR 420
K ++ I +L + ++ + + K++Y+ YA LYF +E E NE LE I
Sbjct: 27 KRKQIERSINKILINRSRVYANIFIYDQFKIIYRLYAGLYFIVCIENE-NEFYILEFIQF 85
Query: 421 YVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXL-QVN 540
++LD +F VCELD++FNF Y+ D+ LGG + +VN
Sbjct: 86 MAQMLDAFFTNVCELDLLFNFHLLYYFFDNIILGGYIYEVN 126
>UniRef50_Q5KFS7 Cluster: Golgi to vacuole transport-related
protein, putative; n=2; Basidiomycota|Rep: Golgi to
vacuole transport-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 220
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = +1
Query: 322 DVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFI 501
D +V+Y+ YA+LYF ++ ++EL L+LI +VE LD+ F VCELD+IF+F++ Y +
Sbjct: 91 DTRVIYRHYATLYFVFVVDGAESELGILDLIQVFVESLDRAFENVCELDLIFHFDEVYHV 150
Query: 502 LDDWFLGG 525
L + GG
Sbjct: 151 LSEIIQGG 158
>UniRef50_Q0J5W7 Cluster: Os08g0395300 protein; n=2; Oryza
sativa|Rep: Os08g0395300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 227
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +1
Query: 277 VLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXV 456
VL CSF+E ++ KVVY+RYASL+F ++ ++NEL LE IH +VE +D++FG V
Sbjct: 91 VLGSGSVQCSFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNV 150
Query: 457 CELDIIFNFEKAYFILD 507
+ F+ YF D
Sbjct: 151 ----VFFSNPNNYFSCD 163
Score = 32.3 bits (70), Expect = 8.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 457 CELDIIFNFEKAYFILDDWFLGGXL 531
CELDI+F+ EK +F+L++ + G +
Sbjct: 184 CELDIMFHLEKVHFMLEEMVMNGCI 208
>UniRef50_Q1EQ11 Cluster: Sigma subunit isoform 3; n=1; Entamoeba
histolytica|Rep: Sigma subunit isoform 3 - Entamoeba
histolytica
Length = 163
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLE-----W--KDVKVVYKRYASLYFCCAMEQEDNELLT 402
+++ R+L + R K C+ + W K + V + YA+L F C + +NEL
Sbjct: 28 QQKVVRDLYALLCKRTGKSCNIISVPQSIWGEKGITAVSRTYATLSFICVFDDNENELFI 87
Query: 403 LELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPV 546
LI VE+LDK F VCELD++F+ ++ +++L+++ G + N +
Sbjct: 88 HSLIQNIVEVLDKCFENVCELDLVFHSDRVHYVLNEFIQAGLILNNDI 135
>UniRef50_P47064 Cluster: AP-3 complex subunit sigma; n=12;
Saccharomycetales|Rep: AP-3 complex subunit sigma -
Saccharomyces cerevisiae (Baker's yeast)
Length = 194
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/69 (40%), Positives = 48/69 (69%)
Frame = +1
Query: 319 KDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYF 498
+D++++YK YA+LYF ++ +++EL L+LI +VE LD+ F V ELD+IFN++
Sbjct: 71 EDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLES 130
Query: 499 ILDDWFLGG 525
+L++ GG
Sbjct: 131 VLEEIVQGG 139
>UniRef50_A6SQM4 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 333
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +1
Query: 331 VVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
V Y+ YA+LYF ++ L ++LI YVE LD+ F VCELD+IFNFE + L +
Sbjct: 76 VTYRHYATLYFIIISTSTESPLALIDLIQVYVEALDRLFENVCELDLIFNFETLHATLSE 135
Query: 511 WFLGG 525
+GG
Sbjct: 136 MIVGG 140
>UniRef50_O13562 Cluster: Putative uncharacterized protein YLR171W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLR171W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 129
Score = 59.7 bits (138), Expect = 5e-08
Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -2
Query: 470 MSSSQTLPKYLSSSST*RWI-NXXXXXXXXXXSIAQQKYSDAYLLYTTLTSFHSRKEHIL 294
MSSSQTLPKY+S ST RWI + I KY AY LYTTL S +S HIL
Sbjct: 1 MSSSQTLPKYVSIVSTNRWIISKVSSSLSTSGVIPTIKYRLAYRLYTTLWSLYSMMLHIL 60
Query: 293 GFRASTVVINSLVFSSLAYLD 231
GF A+ V + S + + D
Sbjct: 61 GFLANIVGVKSFTIFAFSPAD 81
>UniRef50_UPI000155E0E1 Cluster: PREDICTED: similar to
clathrin-associated protein 17; n=1; Equus caballus|Rep:
PREDICTED: similar to clathrin-associated protein 17 -
Equus caballus
Length = 148
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 385 DNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWF 516
DN L LE IH +VE+L+KYF VCEL ++FNF K Y ++D+ F
Sbjct: 46 DNNLAHLEAIHHFVEVLNKYFHNVCELGLVFNFYKVYTVVDEMF 89
>UniRef50_A0E8B6 Cluster: Chromosome undetermined scaffold_82, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_82,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 151
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/100 (27%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKD------VKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ ++L+ P C+F + D K+V + + +LYF ++++++EL L
Sbjct: 28 QQQIEQKLVQLTSKLSPNSCNFFKDLDGIYDKKCKIVMRFFGTLYFIAVIDEDESELGVL 87
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+LI V+L+DK F CELD++++ +K ++D+ + G
Sbjct: 88 DLIQNIVDLMDKIFENACELDVLYHPDKMNALIDEIIVAG 127
>UniRef50_Q00TI3 Cluster: Clathrin adaptor complex, small subunit;
n=1; Ostreococcus tauri|Rep: Clathrin adaptor complex,
small subunit - Ostreococcus tauri
Length = 111
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +1
Query: 388 NELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+EL L+LI YVE LDK F VCELD+IFN KAY +LD+ +GG
Sbjct: 32 SELAMLDLIQVYVETLDKVFENVCELDLIFNSPKAYTVLDETVVGG 77
>UniRef50_A2DEN6 Cluster: Clathrin adaptor complex small chain
family protein; n=2; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 154
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/94 (26%), Positives = 50/94 (53%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
+++ E+I ++R +M D+K+VYKRY ++Y +E+ NE+ + +
Sbjct: 42 RQKLESEIIRQCVSRNEQMSFTFHHGDLKIVYKRYLAIYCIATVEEGANEIAVVSFFDFF 101
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+ L +YFG + E I++N + Y L++ + G
Sbjct: 102 FQTLREYFGDITEFHILYNLPQCYTALNEIIVDG 135
>UniRef50_A6R6G2 Cluster: AP-3 complex subunit sigma; n=14;
Pezizomycotina|Rep: AP-3 complex subunit sigma -
Ajellomyces capsulatus NAm1
Length = 186
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 328 KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILD 507
++ Y+ YA+L F ++ L ++LI +VE LD+ F VCELD+IF FE + +L
Sbjct: 70 QITYRTYATLSFILISTSTESPLALIDLIQVFVEALDRLFENVCELDLIFGFETMHAVLG 129
Query: 508 DWFLGG 525
+ +GG
Sbjct: 130 EMIVGG 135
>UniRef50_Q8SRF9 Cluster: ADAPTIN SMALL SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: ADAPTIN SMALL SUBUNIT -
Encephalitozoon cuniculi
Length = 98
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +1
Query: 277 VLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXV 456
VLA+K + + + K+ VV+ R+ +++ +E E NE+ L LI+ + + D++F V
Sbjct: 2 VLAQKER--NIADGKET-VVFNRFGNIFMAFVVENE-NEMYILSLINNLMSIYDRFFTKV 57
Query: 457 CELDIIFNFEKAYFILDDWFLGG 525
CEL I+NF++ + ILD++ G
Sbjct: 58 CELHFIYNFKETHIILDNYIANG 80
>UniRef50_Q1EQ10 Cluster: Sigma subunit isoform 4; n=1; Entamoeba
histolytica|Rep: Sigma subunit isoform 4 - Entamoeba
histolytica
Length = 152
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +1
Query: 313 EWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKA 492
E +D + V +R+AS++ ++E+NEL E IH V++ D F CE+DII + A
Sbjct: 51 ECRDHRFVMRRFASIFVIVGFDEEENELAIYEFIHFLVQIYDLLFDNACEIDIISRIDDA 110
Query: 493 YFILD 507
+++D
Sbjct: 111 LWVID 115
>UniRef50_Q24CG2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 532
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/72 (34%), Positives = 45/72 (62%)
Frame = +1
Query: 340 KRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFL 519
++YASL+F ++Q+++EL L+LI VE D F VCELD+++ +K ++D+ +
Sbjct: 26 RQYASLHFIMIIDQDESELSALDLIQIIVEGCDTLFENVCELDMVYFPDKINALIDEIII 85
Query: 520 GGXLQVNPVKKE 555
GG + + +E
Sbjct: 86 GGCVIETKISEE 97
>UniRef50_A2DE49 Cluster: Clathrin adaptor complex small chain
family protein; n=3; Trichomonas vaginalis G3|Rep:
Clathrin adaptor complex small chain family protein -
Trichomonas vaginalis G3
Length = 163
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 319 KDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYF 498
+ V +VY YASL+ +++ +N L L++IH +VE+L+ F V E+ + FN +KA
Sbjct: 62 RKVFIVYCAYASLFVITVVDECENPLAMLDIIHTFVEVLNGCFKDVSEVQLAFNPDKALQ 121
Query: 499 ILDDWFLGGXL 531
+LD GG +
Sbjct: 122 VLDSLINGGLI 132
>UniRef50_A7EY37 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 118
Score = 39.5 bits (88), Expect(2) = 2e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 439 KYFGXVCELDIIFNFEKAYFILDDWFLGGXLQVNPVK 549
+Y G + DIIFNF+KAYFILD+ L G +Q + K
Sbjct: 52 EYKGQITS-DIIFNFQKAYFILDELLLAGEMQESSKK 87
Score = 27.9 bits (59), Expect(2) = 2e-04
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWK 321
K + +++ VLAR+ +MC+FLE+K
Sbjct: 29 KAKIIKDVSQLVLARRTRMCNFLEYK 54
>UniRef50_Q6CIZ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 103
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 509 SSSMKYAFSKLKMMSSSQTLPKYLSSSST*RW-INXXXXXXXXXXSIAQQKYSDAYLLYT 333
SS+M YA KL M+S+SQT PKYLS ST I+ SI KY AY LYT
Sbjct: 42 SSNMLYALLKLNMISNSQTFPKYLSIVSTNLCIISKVNNSLSESKSIPAMKYKLAYFLYT 101
Query: 332 TL 327
TL
Sbjct: 102 TL 103
>UniRef50_A3ANY1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 227
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 454 VCELDIIFNFEKAYFILDDWFLGGXLQ 534
VCELD+IFNF KAYFILD+ + G LQ
Sbjct: 164 VCELDLIFNFHKAYFILDEVLIAGELQ 190
>UniRef50_Q5CU86 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 139
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +1
Query: 295 KMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDII 474
K S+ D ++++K+Y ++ ++ ++N LL L I E + + ++D+I
Sbjct: 48 KHLSYFTLGDTRIIFKKYKKIFMITGVDFDENILLMLATIQLINEAFGSHSRDISDVDVI 107
Query: 475 FNFEKAYFILDDWFLGG 525
+N +K I+D+ LGG
Sbjct: 108 YNNKKYMKIIDEIILGG 124
>UniRef50_A3AC67 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 522
Score = 39.1 bits (87), Expect = 0.072
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 265 LITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQED 387
L+ L + CSF+E ++ KVVY+RYASL+F ++ ++
Sbjct: 467 LLLCTLVQTVFACSFVEHRNYKVVYRRYASLFFLVGVDNDE 507
>UniRef50_UPI0000D67F79 Cluster: PREDICTED: similar to Chain M, Ap2
Clathrin Adaptor Core; n=2; Eutheria|Rep: PREDICTED:
similar to Chain M, Ap2 Clathrin Adaptor Core - Mus
musculus
Length = 230
Score = 37.9 bits (84), Expect = 0.17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +1
Query: 337 YKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
Y ++++++ +Q N + +E +++ +++ YFG + E +I NF Y +LD+
Sbjct: 57 YVKWSNIWLAAVTKQNVNAAMVIEFLYKMCDIMAAYFGKISEENIKNNFVLVYELLDE 114
>UniRef50_Q4SPT3 Cluster: Chromosome 7 SCAF14536, whole genome
shotgun sequence; n=9; Euteleostomi|Rep: Chromosome 7
SCAF14536, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 449
Score = 37.9 bits (84), Expect = 0.17
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 262 ELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLT-LELIHRYVELLD 438
E +T + +P + + KD+ V+ R LY+ D+ T +E ++R L+
Sbjct: 34 EKVTALTGDQPPVV--MTHKDIYFVHIRQGGLYWVATTTAVDSSPFTVIEFLNRLAALVK 91
Query: 439 KYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
Y G V E + NF Y +LD+ G +Q
Sbjct: 92 DYCGNVSEKSVQMNFALIYELLDEVLDYGYIQ 123
>UniRef50_UPI0000583F86 Cluster: PREDICTED: similar to MGC81080
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC81080 protein -
Strongylocentrotus purpuratus
Length = 436
Score = 37.1 bits (82), Expect = 0.29
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 331 VVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
+++ + LYF C+ Q++ LEL+ R L+ + G + E I+ N Y +LD+
Sbjct: 56 IIHIKCNGLYFICSASQDEPPFAALELLERLSGLVKDFCGIISEEAIVQNTALVYELLDE 115
>UniRef50_Q1JSZ4 Cluster: Clathrin coat assembly protein, putative;
n=1; Toxoplasma gondii|Rep: Clathrin coat assembly
protein, putative - Toxoplasma gondii
Length = 517
Score = 37.1 bits (82), Expect = 0.29
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 325 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFIL 504
+ + R + LYF +Q + + +EL+HR +++ + G + E I NF Y +L
Sbjct: 100 ITFAFLRRSGLYFVLTTQQNPSPAVLIELLHRLTKIIQDFCGVLNEEAIRKNFVMIYELL 159
Query: 505 DD 510
D+
Sbjct: 160 DE 161
>UniRef50_Q55EZ6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 540
Score = 36.7 bits (81), Expect = 0.39
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +1
Query: 250 EKTRELITTVLARKPKMC------SFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLEL 411
E T+ + +LA PK+ +F+E ++++ VY+ SLY + N L LE
Sbjct: 23 EMTKSRVEGLLAAFPKLIGLGRQHTFIETENIRYVYQPLESLYIVLITNKNSNILEDLET 82
Query: 412 IHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
+H +L+ +Y E DI N + F D+
Sbjct: 83 LHLLAKLVPEY-SNFDEYDISKNAFELIFTFDE 114
>UniRef50_Q57YR2 Cluster: Mu-adaptin 4, putative; n=3;
Trypanosoma|Rep: Mu-adaptin 4, putative - Trypanosoma
brucei
Length = 454
Score = 36.3 bits (80), Expect = 0.51
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 307 FLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFE 486
F K V + + L F C + LTL+++ R +E++ Y G + E + NF
Sbjct: 60 FFTEKGVHFCFVKRNELLFVCTSLTNTSPSLTLDMLLRILEVIRDYLGSISEKAVRQNFT 119
Query: 487 KAYFILDD 510
Y +LD+
Sbjct: 120 LVYELLDE 127
>UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6;
Alveolata|Rep: Clathrin medium chain, putative -
Theileria parva
Length = 452
Score = 36.3 bits (80), Expect = 0.51
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 355 LYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
+YF N L++ ++R+V +L YF + E I NF Y +LD+ G Q
Sbjct: 83 IYFIAVASSNYNVSLSISFLYRFVGVLTSYFKHLNEESIRDNFAIVYELLDEMIDNGFPQ 142
Query: 535 VNPV 546
V V
Sbjct: 143 VTEV 146
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 36.3 bits (80), Expect = 0.51
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +1
Query: 307 FLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFE 486
F+ + + ++ + +LY C + +N + + + + ++++ +YF + E I NF
Sbjct: 51 FINDQGINYIFINHNNLYICALTRKNENIMTIIIFLSKMIDVMTQYFKSLEEESIRDNFV 110
Query: 487 KAYFILDDWFLGGXLQVNPVK 549
Y +LD+ G +Q K
Sbjct: 111 IIYELLDEMMDFGIVQTTDFK 131
>UniRef50_A3B0G8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 244
Score = 35.9 bits (79), Expect = 0.68
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 421 YVELLDKYFGXVCELDIIFNFEKA 492
+VE LD+ F VCEL I+FNF KA
Sbjct: 104 FVETLDRCFKNVCELHIVFNFNKA 127
>UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=8;
Eukaryota|Rep: Clathrin coat assembly protein ap54 -
Plasmodium yoelii yoelii
Length = 459
Score = 35.9 bits (79), Expect = 0.68
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 346 YASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
Y ++Y ++ N L + +++ +++L YF + E I NF Y +LD+ G
Sbjct: 62 YNNIYILAITKKNSNATLIITFLYKLIQVLKDYFKVLEEESIKDNFVITYELLDEMIDNG 121
Query: 526 XLQVNPVK 549
Q++ VK
Sbjct: 122 FPQLSEVK 129
>UniRef50_Q5KLY0 Cluster: Adaptor complex subunit medium chain 3,
putative; n=1; Filobasidiella neoformans|Rep: Adaptor
complex subunit medium chain 3, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 454
Score = 35.5 bits (78), Expect = 0.89
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 355 LYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
LYF + QE N L + +++L Y G V E I NF+ Y ++++
Sbjct: 82 LYFLVPIGQEVNPLFAFSFLESLLDILRNYLGDVTETTIKDNFDIVYMLIEE 133
>UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23;
Eukaryota|Rep: AP-2 complex subunit mu - Caenorhabditis
elegans
Length = 441
Score = 35.5 bits (78), Expect = 0.89
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 352 SLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
+++ C Q N + E + R+ + + YFG + E ++ NF Y +LD+
Sbjct: 62 NVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDE 114
>UniRef50_Q4RPG4 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=4; Eumetazoa|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2294
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 355 LYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+YF ++ E L +E +HR V+ YFG E I N Y +L++ G
Sbjct: 64 IYFVAVIQSEVPPLFVIEFLHRVVDTFQDYFGVCTEAAIKDNVVVVYELLEEMLDNG 120
>UniRef50_Q5C0S1 Cluster: SJCHGC06381 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06381 protein - Schistosoma
japonicum (Blood fluke)
Length = 288
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 352 SLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
+LYF E + LL +E + +++ YFG E + N Y ILD+ GG
Sbjct: 99 NLYFLAVCANEISPLLVIEFLDCVNSIIEDYFGLATETSVKENVVLIYEILDEMLDGG 156
>UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba
histolytica|Rep: Mu 2 subunit isoform 2 - Entamoeba
histolytica
Length = 407
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 343 RYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
R SLY +N + E++H+ VE+ YF + E I + Y +LD+
Sbjct: 50 RVNSLYIVALARSNNNAAVVFEVLHKIVEVFQAYFSTIDENTIKSQYVLIYELLDE 105
>UniRef50_Q2HFU3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1324
Score = 33.9 bits (74), Expect = 2.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 250 EKTRELITTVLARKPKMCSFLEWKD-VKVVYKRYASLYFCCAMEQEDNELL--TLELIHR 420
E++ E + AR+PK S LEW D V Y AS+ F ++ E L +E + +
Sbjct: 906 EQSMEKVDAATAREPKGESLLEWNDEVGRTYAELASMLFDSGRHKDGKEYLRMAIETVKK 965
Query: 421 YVE 429
Y +
Sbjct: 966 YAD 968
>UniRef50_Q22S17 Cluster: Nonclathrin coat protein zeta2-cop-related
protein, putative; n=1; Tetrahymena thermophila
SB210|Rep: Nonclathrin coat protein zeta2-cop-related
protein, putative - Tetrahymena thermophila SB210
Length = 206
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 289 KPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELD 468
KP + + +V+K++ + +QE+NE+L +++ +E L+ +++
Sbjct: 78 KPSQTEIFSFYQLNIVFKKFKDVLLFIFSDQEENEILLSQILDVILESLNHITQDNIDVE 137
Query: 469 -IIFNFEKAYFILDD 510
II FE I+D+
Sbjct: 138 QIISKFESVITIIDE 152
>UniRef50_Q5DAA0 Cluster: SJCHGC02081 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02081 protein - Schistosoma
japonicum (Blood fluke)
Length = 181
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 319 KDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFG 450
+D +++Y+ YA+LYF ++ ++EL L+LI + L + G
Sbjct: 73 QDYRLIYRHYATLYFVFCVDSSESELGILDLIQVHYILNELVLG 116
>UniRef50_A5K403 Cluster: Clathrin coat assembly protein AP50,
putative; n=1; Plasmodium vivax|Rep: Clathrin coat
assembly protein AP50, putative - Plasmodium vivax
Length = 763
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 331 VVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYF 447
+ + + SLYF + E N ++++E+I VEL KYF
Sbjct: 68 IFFIKQDSLYFVIIKKDETNPVMSVEVIREMVELFKKYF 106
>UniRef50_Q95WT5 Cluster: Homeobox Hx; n=1; Branchiostoma
floridae|Rep: Homeobox Hx - Branchiostoma floridae
(Florida lancelet) (Amphioxus)
Length = 309
Score = 32.7 bits (71), Expect = 6.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -3
Query: 535 LVAXHPRTSHQV*SMLSQS*R*CPVHKXCQNTCPAVLHSDGSTPRSAAHCLL 380
L HP+ S+L Q + C H CQ TC V H G TP HC++
Sbjct: 251 LFRGHPQREPLPPSLLLQ--QACLQHPRCQVTCFPVRHPTGDTPDVLFHCVV 300
>UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family
protein; n=5; Oligohymenophorea|Rep: Adaptor complexes
medium subunit family protein - Tetrahymena thermophila
SB210
Length = 433
Score = 32.7 bits (71), Expect = 6.3
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 KTRELITTVLARKP-KMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVE 429
+T + T V+ARK K + ++ Y + + N +T++ +++ +
Sbjct: 28 ETMQFCTNVVARKESKESPIVNIDGTSFIHVSYKDIILLATTKCNINAAMTIQFLYQLIN 87
Query: 430 LLDKYFGXVCELDIIFNFEKAYFILDD 510
+ YFG E +I F Y +LD+
Sbjct: 88 VCKSYFGDFDENNIRKQFVLIYELLDE 114
>UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94;
Fungi/Metazoa group|Rep: AP-2 complex subunit mu-1 -
Homo sapiens (Human)
Length = 435
Score = 32.7 bits (71), Expect = 6.3
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
++++ +Q N + E +++ +++ YFG + E +I NF Y +LD+
Sbjct: 61 SNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDE 114
>UniRef50_Q3F0C8 Cluster: Transcriptional regulator, TetR family;
n=3; Bacillus cereus group|Rep: Transcriptional
regulator, TetR family - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 198
Score = 32.3 bits (70), Expect = 8.3
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 259 RELITTVLARKPKMCSFLEW---KDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVE 429
R+L+ T + K ++ +F EW +D + + ++ L ++E+ N+L+ E+ ++VE
Sbjct: 74 RKLLDTPIPVKERLSNFFEWALKEDFENIDQK-GCLLINASIERAKNDLMVQEIFSKHVE 132
Query: 430 LLDKYFGXVCE 462
LL + V E
Sbjct: 133 LLKQAIEAVME 143
>UniRef50_A2DK67 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 502
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 304 SFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNF 483
S++E ++++ VY+ LYF ++ N L LEL+ ++L + E ++ +
Sbjct: 45 SYVESQNIRYVYQNLDKLYFILITTKDSNILEDLELLSMLIDLTRTIIPTIDETTVLSHN 104
Query: 484 EKAYFILDDWFLGGXLQ 534
F D+ G Q
Sbjct: 105 LDLIFAYDEVIFDGYRQ 121
>UniRef50_A7E9J0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 57
Score = 32.3 bits (70), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPD 238
++ F+L+ +RQGK RL KWY + D
Sbjct: 2 VLSFILIQNRQGKTRLAKWYAPYND 26
>UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1;
Schizosaccharomyces pombe|Rep: AP-2 complex subunit mu -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 32.3 bits (70), Expect = 8.3
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 334 VYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDW 513
+Y ++ LY + N ++ LE + ++ L YFG + E + N + +LD+
Sbjct: 55 IYTKHEDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEM 114
Query: 514 FLGGXLQ 534
G +Q
Sbjct: 115 IDYGIIQ 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,562,144
Number of Sequences: 1657284
Number of extensions: 9297396
Number of successful extensions: 20977
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 19941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20966
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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