Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0838
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.9  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 491 HTSYLMTGSWV 523
           HTS  MTG WV
Sbjct: 124 HTSSYMTGIWV 134


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 491 HTSYLMTGSWV 523
           HTS  MTG WV
Sbjct: 357 HTSSYMTGIWV 367


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 491 HTSYLMTGSWV 523
           HTS  MTG WV
Sbjct: 357 HTSSYMTGIWV 367


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 507 IKYEVCFLKVKDDVQFTNXAKILVQQF 427
           IKY      V   + F N A+ LV+ F
Sbjct: 112 IKYRTILESVDHRLAFVNSAQALVKNF 138


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -2

Query: 566 FSEHSFFTGFTCSXPPK 516
           FS   FF  F C   PK
Sbjct: 76  FSRSDFFQQFECDNEPK 92


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 325 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
           V + Y  Y  L FCCA       LL L  I+ +
Sbjct: 256 VCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 487 KAYFILDDWFLG 522
           +  F+LD WF G
Sbjct: 46  RCVFVLDPWFAG 57


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  LKRWSQ*NVIKYCK*IKIIHSNFC 131
           L + SQ  +I++C  + ++   FC
Sbjct: 173 LSKMSQVMLIQFCAFVVVLKQKFC 196


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 105 IKIIHSNFCNRHNRKNQES 161
           + ++HSN  N H + +Q++
Sbjct: 303 MNLLHSNDLNMHQQHHQQN 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,685
Number of Sequences: 336
Number of extensions: 2707
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)