Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0838
(573 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p pro... 182 3e-46
AF228054-1|AAG43051.1| 164|Drosophila melanogaster clathrin-ass... 182 3e-46
AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA... 182 3e-46
BT010252-1|AAQ23570.1| 142|Drosophila melanogaster RE35245p pro... 102 3e-22
AE014297-2967|AAF55874.1| 142|Drosophila melanogaster CG6056-PA... 102 3e-22
AF228055-1|AAG43052.1| 142|Drosophila melanogaster adaptor prot... 100 1e-21
AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p pro... 74 1e-13
AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor prot... 74 1e-13
AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA... 74 1e-13
AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p pro... 36 0.039
AJ005962-1|CAA06785.1| 437|Drosophila melanogaster clathrin-ass... 36 0.039
AF110232-1|AAF14248.1| 437|Drosophila melanogaster clathrin-ass... 36 0.039
AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB... 36 0.039
AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA... 36 0.039
AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p pro... 34 0.12
AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit ... 34 0.12
AF110233-1|AAF14249.1| 415|Drosophila melanogaster clathrin-ass... 34 0.12
AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA ... 34 0.12
AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein ... 29 5.9
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB... 29 5.9
>AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p
protein.
Length = 157
Score = 182 bits (443), Expect = 3e-46
Identities = 80/97 (82%), Positives = 90/97 (92%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ TREL+TT+LARKPKMCSFLEWKD K+VYKRYASLYFCCA+EQ DNELLTLE+IHRY
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRY 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VELLDKYFG VCELDIIFNFEKAYFILD+ +GG +Q
Sbjct: 88 VELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MM FMLLFSRQGKLRLQKWY+A+PD + PK L K K+ K
Sbjct: 1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYK 60
>AF228054-1|AAG43051.1| 164|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 small chain
sigma1 protein.
Length = 164
Score = 182 bits (443), Expect = 3e-46
Identities = 80/97 (82%), Positives = 90/97 (92%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ TREL+TT+LARKPKMCSFLEWKD K+VYKRYASLYFCCA+EQ DNELLTLE+IHRY
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRY 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VELLDKYFG VCELDIIFNFEKAYFILD+ +GG +Q
Sbjct: 88 VELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MM FMLLFSRQGKLRLQKWY+A+PD + PK L K K+ K
Sbjct: 1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYK 60
>AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA
protein.
Length = 157
Score = 182 bits (443), Expect = 3e-46
Identities = 80/97 (82%), Positives = 90/97 (92%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ TREL+TT+LARKPKMCSFLEWKD K+VYKRYASLYFCCA+EQ DNELLTLE+IHRY
Sbjct: 28 KKKITRELVTTILARKPKMCSFLEWKDCKIVYKRYASLYFCCAIEQNDNELLTLEIIHRY 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VELLDKYFG VCELDIIFNFEKAYFILD+ +GG +Q
Sbjct: 88 VELLDKYFGSVCELDIIFNFEKAYFILDELLIGGEIQ 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +2
Query: 164 MMQFMLLFSRQGKLRLQKWYVAHPDXXXXXXXEN*LPQC*LENPKCVLSLNGKMLKLCIK 343
MM FMLLFSRQGKLRLQKWY+A+PD + PK L K K+ K
Sbjct: 1 MMLFMLLFSRQGKLRLQKWYMAYPDKVKKKITRELVTTILARKPKMCSFLEWKDCKIVYK 60
>BT010252-1|AAQ23570.1| 142|Drosophila melanogaster RE35245p
protein.
Length = 142
Score = 102 bits (245), Expect = 3e-22
Identities = 43/97 (44%), Positives = 66/97 (68%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ E+ V R K +F+E+++ K+VY+RYA LYFC ++ DN L LE IH +
Sbjct: 28 KQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VE+L++YF VCELD++FNF K Y ++D+ FL G ++
Sbjct: 88 VEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIR 124
>AE014297-2967|AAF55874.1| 142|Drosophila melanogaster CG6056-PA
protein.
Length = 142
Score = 102 bits (245), Expect = 3e-22
Identities = 43/97 (44%), Positives = 66/97 (68%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ E+ V R K +F+E+++ K+VY+RYA LYFC ++ DN L LE IH +
Sbjct: 28 KQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFLGGXLQ 534
VE+L++YF VCELD++FNF K Y ++D+ FL G ++
Sbjct: 88 VEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIR 124
>AF228055-1|AAG43052.1| 142|Drosophila melanogaster adaptor protein
complex AP-2 smallchain sigma2 protein.
Length = 142
Score = 100 bits (240), Expect = 1e-21
Identities = 43/92 (46%), Positives = 63/92 (68%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRY 423
K++ E+ V R K SF+E+++ K+VY+RYA LYFC ++ DN L LE IH +
Sbjct: 28 KQKLIEEVHAVVTVRDAKHTSFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNF 87
Query: 424 VELLDKYFGXVCELDIIFNFEKAYFILDDWFL 519
VE+L++YF VCELD++FNF K Y ++D+ FL
Sbjct: 88 VEVLNEYFHNVCELDLVFNFYKVYSVVDEMFL 119
>AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p
protein.
Length = 191
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEW------KDVKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ +E V R +C+FLE D K++Y+ YA+LYF ++ ++EL L
Sbjct: 28 QQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGIL 87
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG-XLQVN 540
+LI +VE LDK F VCELD+IF+ + + IL + +GG LQ N
Sbjct: 88 DLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTN 133
>AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor protein
complex AP-3 smallchain sigma3 protein.
Length = 191
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEW------KDVKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ +E V R +C+FLE D K++Y+ YA+LYF ++ ++EL L
Sbjct: 28 QQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGIL 87
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG-XLQVN 540
+LI +VE LDK F VCELD+IF+ + + IL + +GG LQ N
Sbjct: 88 DLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTN 133
>AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA
protein.
Length = 191
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Frame = +1
Query: 244 KEEKTRELITTVLARKPKMCSFLEW------KDVKVVYKRYASLYFCCAMEQEDNELLTL 405
+++ +E V R +C+FLE D K++Y+ YA+LYF ++ ++EL L
Sbjct: 28 QQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGIL 87
Query: 406 ELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG-XLQVN 540
+LI +VE LDK F VCELD+IF+ + + IL + +GG LQ N
Sbjct: 88 DLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTN 133
>AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p
protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
A+++ +Q N + E + + +E++ YFG + E +I NF Y +LD+
Sbjct: 61 ANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDE 114
>AJ005962-1|CAA06785.1| 437|Drosophila melanogaster
clathrin-associated protein protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
A+++ +Q N + E + + +E++ YFG + E +I NF Y +LD+
Sbjct: 61 ANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDE 114
>AF110232-1|AAF14248.1| 437|Drosophila melanogaster
clathrin-associated adaptor complexAP-2 medium chain
protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
A+++ +Q N + E + + +E++ YFG + E +I NF Y +LD+
Sbjct: 61 ANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDE 114
>AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB,
isoform B protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
A+++ +Q N + E + + +E++ YFG + E +I NF Y +LD+
Sbjct: 61 ANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDE 114
>AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA,
isoform A protein.
Length = 437
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 349 ASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDD 510
A+++ +Q N + E + + +E++ YFG + E +I NF Y +LD+
Sbjct: 61 ANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDE 114
>AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 370 AMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
A +QE L +E +HR V+ YFG E I N+ Y +LD+ G
Sbjct: 67 ACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNG 118
>AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit of
clathrin-associatedprotein complex AP-3 protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 370 AMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
A +QE L +E +HR V+ YFG E I N+ Y +LD+ G
Sbjct: 67 ACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNG 118
>AF110233-1|AAF14249.1| 415|Drosophila melanogaster
clathrin-associated adaptor complexAP-3 medium chain
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 370 AMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
A +QE L +E +HR V+ YFG E I N+ Y +LD+ G
Sbjct: 67 ACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNG 118
>AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 370 AMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFILDDWFLGG 525
A +QE L +E +HR V+ YFG E I N+ Y +LD+ G
Sbjct: 67 ACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLDNG 118
>AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein
protein.
Length = 1199
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 325 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFIL 504
+ V KRYASL EQ+ N++ E + Y+ L + C LD F+ Y I+
Sbjct: 622 ISVQMKRYASLD-----EQQLNQIE--EKLTEYLRLALTNYMAYCRLDSGFSSAAIYRII 674
Query: 505 DDWFLGGXLQVNPVKKECSE 564
WF N K+C E
Sbjct: 675 SLWF------TNATSKQCQE 688
>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
protein.
Length = 2767
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 325 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGXVCELDIIFNFEKAYFIL 504
+ V KRYASL EQ+ N++ E + Y+ L + C LD F+ Y I+
Sbjct: 2190 ISVQMKRYASLD-----EQQLNQIE--EKLTEYLRLALTNYMAYCRLDSGFSSAAIYRII 2242
Query: 505 DDWFLGGXLQVNPVKKECSE 564
WF N K+C E
Sbjct: 2243 SLWF------TNATSKQCQE 2256
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,208,993
Number of Sequences: 53049
Number of extensions: 435165
Number of successful extensions: 855
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -