Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0836
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 124 LTTPVILNLFFVVRHIFNDFKIWR 53
           L T  +LNL  V++  F D   W+
Sbjct: 479 LATLSVLNLLSVIKSSFLDINTWK 502


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 297 RHFVQSFFEIMKIAFLVSIKY 359
           RH V+S F + +I  LV++KY
Sbjct: 373 RHSVRSVFFLSEIFGLVNLKY 393


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 103 NLFFVVRHIFNDFKIWRHTKK 41
           NL+F++  +F   KI + T K
Sbjct: 173 NLYFIIIQLFGSMKIVKGTLK 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,904
Number of Sequences: 336
Number of extensions: 1828
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)