Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0834
(481 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 122 3e-27
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 121 7e-27
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 121 1e-26
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 119 3e-26
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 118 9e-26
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 111 8e-24
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 100 2e-20
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 99 3e-20
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 99 6e-20
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 97 2e-19
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 96 3e-19
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 94 1e-18
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 93 3e-18
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 93 4e-18
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 91 1e-17
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 91 2e-17
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 90 3e-17
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 88 8e-17
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 88 8e-17
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 88 8e-17
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 88 1e-16
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 87 1e-16
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 85 8e-16
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 83 2e-15
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 83 3e-15
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 83 4e-15
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 83 4e-15
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 82 5e-15
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 81 2e-14
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 80 2e-14
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 78 9e-14
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 77 2e-13
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 77 3e-13
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 76 5e-13
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 75 6e-13
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 75 6e-13
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 73 4e-12
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 73 4e-12
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 73 4e-12
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 72 8e-12
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 72 8e-12
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 69 5e-11
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 68 1e-10
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 68 1e-10
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 65 9e-10
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 64 2e-09
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 64 2e-09
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 63 3e-09
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 63 3e-09
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 62 6e-09
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 62 6e-09
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 60 3e-08
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 59 6e-08
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 58 8e-08
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 58 1e-07
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 58 1e-07
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 58 1e-07
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 57 2e-07
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 56 3e-07
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 56 3e-07
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 56 5e-07
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 56 5e-07
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 2e-06
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 52 5e-06
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 51 2e-05
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 48 1e-04
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 47 2e-04
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 47 2e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 47 3e-04
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 46 6e-04
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 45 8e-04
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 45 0.001
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 43 0.004
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 42 0.005
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 42 0.009
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.017
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 41 0.017
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 40 0.022
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 40 0.029
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 39 0.051
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 39 0.067
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 39 0.067
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 38 0.12
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 38 0.15
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 37 0.20
UniRef50_Q4YJZ2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.20
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 36 0.36
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 36 0.47
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 36 0.47
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 36 0.62
UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 35 0.82
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 35 0.82
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 1.9
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 34 1.9
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 33 2.5
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 33 2.5
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 33 3.3
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 4.4
UniRef50_Q2FUM1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q98QY0 Cluster: Putative uncharacterized protein MYPU_2... 32 7.7
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 32 7.7
UniRef50_Q8ILJ6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q8I447 Cluster: DNA repair protein, putative; n=3; Plas... 32 7.7
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 122 bits (295), Expect = 3e-27
Identities = 72/154 (46%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +1
Query: 10 PIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYRVNY 189
P+FKI NN CLIIQI+TGLFL ++YTA+I +AFY VN+
Sbjct: 10 PLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNH 69
Query: 190 ICRNVNYG*IIRTLHANGASXFLFAFIYIS-DEEFTMNLLT*NMYDLXXXXXXXXXXXXX 366
ICR+VNYG ++RTLHANGAS F F IY+ L
Sbjct: 70 ICRDVNYGWLLRTLHANGAS-FFFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTA 128
Query: 367 XXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFW ATVITNLL AIPYLG LV
Sbjct: 129 FMGYVLPWGQMSFWVATVITNLLYAIPYLGMDLV 162
Score = 38.3 bits (85), Expect = 0.088
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
FICIYLH+GRGIYY S+
Sbjct: 92 FICIYLHVGRGIYYGSY 108
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 121 bits (292), Expect = 7e-27
Identities = 68/157 (43%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT P+ KI+NN CLI+QI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
V +ICR+VNYG IIR +HANGAS F F++I + + +++
Sbjct: 66 VTHICRDVNYGWIIRYMHANGASMFFICLFMHIGRGLYYGSYTFLETWNI-GVLLLFTTM 124
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSAIPY+GT LV
Sbjct: 125 ATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLV 161
Score = 34.7 bits (76), Expect = 1.1
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
FIC+++HIGRG+YY S+
Sbjct: 91 FICLFMHIGRGLYYGSY 107
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 121 bits (291), Expect = 1e-26
Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT P+FKI+N+ CL +QI+TGLFL ++YT++I AF
Sbjct: 2 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 61
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
V +ICR+VNYG IIR LHANGAS F +++I + + + +++
Sbjct: 62 VVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMM 121
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSA+PY+G LV
Sbjct: 122 TAFVG-YVLPWGQMSFWGATVITNLLSAVPYMGNALV 157
Score = 121 bits (291), Expect = 1e-26
Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT P+FKI+N+ CL +QI+TGLFL ++YT++I AF
Sbjct: 189 KTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSS 248
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
V +ICR+VNYG IIR LHANGAS F +++I + + + +++
Sbjct: 249 VVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMM 308
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSA+PY+G LV
Sbjct: 309 TAFVG-YVLPWGQMSFWGATVITNLLSAVPYMGNALV 344
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 119 bits (287), Expect = 3e-26
Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT P+ KIIN+ CLIIQI+TGLFL ++YT++ AF
Sbjct: 6 KTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
V +ICR+VNYG +IR LHANGAS F F+++ + + + +++
Sbjct: 66 VTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMFMETWNI-GVLLLFAVM 124
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSAIPY+G+ LV
Sbjct: 125 ATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLV 161
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 118 bits (283), Expect = 9e-26
Identities = 66/157 (42%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT P+ KI N CLI QI+TGLFL ++YT++I AF
Sbjct: 6 KTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
V +ICR+VNYG +IR+LHANGAS F +++I+ + + L +++
Sbjct: 66 VTHICRDVNYGWLIRSLHANGASFFFICLYMHIARGLYYGSYLYKETWNI-GVVLFLLVM 124
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSA+PY+G LV
Sbjct: 125 MTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTLV 161
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 111 bits (267), Expect = 8e-24
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K P+ K+IN+ CLI+QI TGLFL ++Y+ + AF
Sbjct: 6 KINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXX 357
+ +I R+VNYG IIR LHANGAS F F++I + + L +++
Sbjct: 66 IAHITRDVNYGWIIRYLHANGASMFFICLFLHIGRGLYYGSFLYSETWNI-GIILLLATM 124
Query: 358 XXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSAIPY+GT LV
Sbjct: 125 ATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLV 161
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 100 bits (239), Expect = 2e-20
Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXF-LFAFIYIS 279
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN AS F +F +I+I+
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFFFIFLYIHIA 96
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + + + YVLP GQ+SFWGATVITNLLSAIPY+GT
Sbjct: 97 RGLYFSSFILKGPW-MSGVTIIFTLMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGT 155
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 99 bits (238), Expect = 3e-20
Identities = 54/121 (44%), Positives = 67/121 (55%)
Frame = +1
Query: 115 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEEFT 294
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS F F
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLY 60
Query: 295 MNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN* 474
T YVLP GQ+SFWGATVITNL SA+PY+G LV+
Sbjct: 61 YGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHW 120
Query: 475 T 477
T
Sbjct: 121 T 121
Score = 38.3 bits (85), Expect = 0.088
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLK 314
F CIYLHIGRG+YY S LK
Sbjct: 48 FFCIYLHIGRGLYYGSHTLK 67
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 98.7 bits (235), Expect = 6e-20
Identities = 54/122 (44%), Positives = 71/122 (58%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISD 282
CLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS F F
Sbjct: 44 CLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFFCMYAHIG 103
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
L YVLP GQ+SFWGATVITNLL+AIP +G+
Sbjct: 104 RGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLTAIPMVGSP 163
Query: 463 LV 468
LV
Sbjct: 164 LV 165
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 97.1 bits (231), Expect = 2e-19
Identities = 55/119 (46%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYIS 279
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS F +I+I+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ L N++ L YVLP GQ+SFW ATVITNLL+AIPYLG
Sbjct: 92 RGLYYGLYLNKNVW-LSGVTLLMTLMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLG 149
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 96.3 bits (229), Expect = 3e-19
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXF-LFAFIYIS 279
CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS F + +++I
Sbjct: 51 CLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHIG 110
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + L YVLP GQ+SFWGATVITNL A+PY+G+
Sbjct: 111 RGVYYHSFHMKKTW-LVGCIIFTMLMVTAFTGYVLPWGQMSFWGATVITNLFGAVPYVGS 169
Query: 460 ILV 468
L+
Sbjct: 170 TLM 172
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 94.3 bits (224), Expect = 1e-18
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYIS 279
CLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FL +++IS
Sbjct: 47 CLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHIS 106
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + L YVLP GQ+SFW ATVITNL SAIPY+G
Sbjct: 107 RNIYHNTWKNKTTWTL-GITIYLLMIITAFMGYVLPWGQMSFWAATVITNLFSAIPYIGN 165
Query: 460 ILV 468
+V
Sbjct: 166 TIV 168
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 93.1 bits (221), Expect = 3e-18
Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYIS 279
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS F + +I+
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLFFICIYTHIA 91
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + ++ L YVLP GQ+SFW ATVITNLL+AIPYLGT
Sbjct: 92 RGLYYGSYMNKEVW-LSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGT 150
Query: 460 IL 465
+
Sbjct: 151 TM 152
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 92.7 bits (220), Expect = 4e-18
Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K+ P+ KI+N+ A CL IQI+TG+ L ++YT ++ AF
Sbjct: 5 KSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNS 64
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLF-AFIYISDEEFTMNLLT*NMYD-LXXXXXXXXX 354
V +I R+VN G ++R LH+N AS F F +++I + + T
Sbjct: 65 VEHIMRDVNNGWLVRYLHSNTASAFFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVM 124
Query: 355 XXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+S WGATVITNL+SAIP++G +V
Sbjct: 125 MATAFLGYVLPYGQMSLWGATVITNLMSAIPWIGQDIV 162
Score = 31.9 bits (69), Expect = 7.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
F +YLHIGRG+YY S+
Sbjct: 90 FFLVYLHIGRGLYYGSY 106
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 91.1 bits (216), Expect = 1e-17
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYIS 279
CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS F+ +++I
Sbjct: 45 CLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIF 104
Query: 280 DEEFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + + + YVLP GQ+SFWGATVIT+L SAIP +G
Sbjct: 105 RGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVG 164
Query: 457 TILV 468
+V
Sbjct: 165 DTIV 168
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 90.6 bits (215), Expect = 2e-17
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Frame = +1
Query: 97 AXCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIY 273
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS F A +++
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 274 ISDEEFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 450
I + + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 451 LG 456
+G
Sbjct: 172 IG 173
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 89.8 bits (213), Expect = 3e-17
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISD 282
L+I II+GL L ++YT N +AF V +I R+VN G ++R +HANGAS F++ +++I
Sbjct: 40 LVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFFFIWVYLHIGR 99
Query: 283 EEFTMNLLT-*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + + YVLP GQ+SFWGATVITNLLSAIP++GT
Sbjct: 100 NLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVITNLLSAIPWIGT 159
Query: 460 ILV 468
V
Sbjct: 160 DFV 162
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 88.2 bits (209), Expect = 8e-17
Identities = 55/156 (35%), Positives = 77/156 (49%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K+ P+ K++N A CLIIQI+TG+ L ++Y ++ AF
Sbjct: 5 KSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNS 64
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEEFTMNLLT*NMYDLXXXXXXXXXXX 360
+ +I R+VN G +IR LH+N AS F F +Y+ L
Sbjct: 65 IEHIMRDVNNGWLIRYLHSNTASAFFF-LVYLHIGR-----------GLYYASYRAPRTL 112
Query: 361 XXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+S WGATVITNL+SAIP++G +V
Sbjct: 113 AWVSLYVLPYGQMSLWGATVITNLISAIPWIGQDIV 148
Score = 32.3 bits (70), Expect = 5.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
F +YLHIGRG+YY S+
Sbjct: 90 FFLVYLHIGRGLYYASY 106
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 88.2 bits (209), Expect = 8e-17
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYIS 279
CL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGAS F+ F++++
Sbjct: 39 CLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMA 98
Query: 280 DEEF--TMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
+ + ++++ Y GQ+S WGATVITNL SAIP++
Sbjct: 99 KGLYYGSYRSPRVTLWNV-GVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 454 GTILVN 471
G +V+
Sbjct: 158 GNDIVS 163
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 88.2 bits (209), Expect = 8e-17
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYIS 279
CL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGAS F+ F++++
Sbjct: 39 CLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMA 98
Query: 280 DEEF--TMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
+ + ++++ Y GQ+S WGATVITNL SAIP++
Sbjct: 99 KGLYYGSYRSPRVTLWNV-GVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFV 157
Query: 454 GTILVN 471
G +V+
Sbjct: 158 GNDIVS 163
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 87.8 bits (208), Expect = 1e-16
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIY-ISDE 285
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS F FA +++ +
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFAVYVHMLRGL 115
Query: 286 EFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 465
+ + + YVLP GQ+SFWGATVITNL SAIPY G +
Sbjct: 116 YYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYFGESI 175
Query: 466 V 468
V
Sbjct: 176 V 176
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 87.4 bits (207), Expect = 1e-16
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Frame = +1
Query: 97 AXCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIY 273
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS F A +I+
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 274 ISDEEFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY 450
I + + + YVLP GQ+SFWGATVIT L AIP
Sbjct: 112 IFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPG 171
Query: 451 LG 456
+G
Sbjct: 172 VG 173
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 85.0 bits (201), Expect = 8e-16
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYI--- 276
+II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS F F +Y+
Sbjct: 52 MIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMF-FIVVYVHMF 110
Query: 277 SDEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + YVLP GQ+SFWGATVITNL SAIP +G
Sbjct: 111 RGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVVG 170
Query: 457 TILV 468
+V
Sbjct: 171 DDIV 174
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 83.4 bits (197), Expect = 2e-15
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISD 282
L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS F F +I+I
Sbjct: 39 LVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFFFMYIHIGR 98
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+ ++ YVLP GQ+S+W + VIT+LLS IPY+G
Sbjct: 99 GIYYGCYRQAGVW-YTGIILMLLLMATSFLGYVLPWGQMSYWASVVITSLLSTIPYIGPS 157
Query: 463 LV 468
LV
Sbjct: 158 LV 159
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 83.0 bits (196), Expect = 3e-15
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYIS 279
CL+IQ+++GL L+ +YTA+ ++AF V +I RNV G ++R +HANG+S F + +I+
Sbjct: 55 CLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHANGSSMFFICIYAHIA 114
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + L ++ Y LP GQ+S+WGATVITN+LS P +G
Sbjct: 115 RGLYYGSYLDKTVW-YFGVHLFLLTMAEAFLGYTLPWGQMSYWGATVITNMLSVSPVVG 172
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 82.6 bits (195), Expect = 4e-15
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYI-S 279
L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS F A F+++
Sbjct: 40 LASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHLFR 99
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + + YVLP GQ+SFWGATVIT+L+SA+P +GT
Sbjct: 100 NLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVITSLVSAVPIVGT 159
Query: 460 ILV 468
LV
Sbjct: 160 DLV 162
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 82.6 bits (195), Expect = 4e-15
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYIS- 279
CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGAS F F ++Y+
Sbjct: 45 CLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFF-WVYLHI 103
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
++ N + YV P GQI GATVIT+LLSAIPY+G
Sbjct: 104 GRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSLLSAIPYMGG 163
Query: 460 ILV 468
LV
Sbjct: 164 FLV 166
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 82.2 bits (194), Expect = 5e-15
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISD 282
+I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GAS FLF F+++
Sbjct: 48 IILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHLGR 107
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
F + YVLP GQ+SFWGATVITNLLS P L
Sbjct: 108 AMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLLSPFPSL 164
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 80.6 bits (190), Expect = 2e-14
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS F F FIY+
Sbjct: 32 LMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMF-FLFIYLHIF 88
Query: 286 EFTMNL-LT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+ +N + + YVL GQ+S+W A VIT+L++++PYLG
Sbjct: 89 KGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSLMTSVPYLGKY 148
Query: 463 LV 468
+V
Sbjct: 149 MV 150
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 80.2 bits (189), Expect = 2e-14
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISD 282
LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS F+F +++I
Sbjct: 38 LIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHIFK 97
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
F M+ ++ + YVL Q+SFW A VIT+LLS IP G
Sbjct: 98 GLFFMSYRLKKVW-MSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPT 156
Query: 463 LV 468
+V
Sbjct: 157 IV 158
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 78.2 bits (184), Expect = 9e-14
Identities = 40/91 (43%), Positives = 52/91 (57%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K+ P+ KI N+ CLI QI+TGLFL ++YT++I AF
Sbjct: 6 KSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFAFIY 273
V +ICR+VNYG +IR +HANGAS F F IY
Sbjct: 66 VTHICRDVNYGWLIRNMHANGAS-FFFICIY 95
Score = 36.7 bits (81), Expect = 0.27
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLK 314
FICIY HIGRG+YY S+ K
Sbjct: 91 FICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K+ P+ KIIN+ CL++QIITGLFL ++YTA+ AF
Sbjct: 6 KSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFSS 65
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFAFIYI 276
+ +ICR+VNYG +IR HANGAS F F +YI
Sbjct: 66 IAHICRDVNYGWVIRYTHANGASMF-FICLYI 96
Score = 35.5 bits (78), Expect = 0.62
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLKYV*SNWN 335
FIC+Y+HI RG+YY S+ K WN
Sbjct: 91 FICLYIHIARGLYYGSYLFK---ETWN 114
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 76.6 bits (180), Expect = 3e-13
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS F F +Y+
Sbjct: 62 LVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAF-FVVVYLHMF 120
Query: 286 E---FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + + Y+LP GQ+S+WGA VI NL SAIP++G
Sbjct: 121 RGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPFIG 180
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 75.8 bits (178), Expect = 5e-13
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGA-SXFLFAFIYIS 279
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GA S F F + ++
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFFFMYCHVG 101
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ + + + YVLP GQ+SFWGATVI+N L+ IP+ G
Sbjct: 102 RGLYYGSYKNFKAWSM-GVAILALSMLEGFMGYVLPAGQMSFWGATVISNFLTVIPFFGD 160
Query: 460 ILV 468
L+
Sbjct: 161 TLL 163
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 75.4 bits (177), Expect = 6e-13
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISDEE 288
IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS FL +++I
Sbjct: 38 IQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHIL-RG 96
Query: 289 FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 447
+ + + + YVLP GQ+S+WGATVITNLLS+IP
Sbjct: 97 LNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATVITNLLSSIP 149
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 75.4 bits (177), Expect = 6e-13
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
KT PI + N+ CLIIQI+TG+FL ++YT ++++AF
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFIS 64
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFAFIYI 276
V +I R+VNYG +IR LHAN AS F F F+Y+
Sbjct: 65 VEHIMRDVNYGWLIRYLHANTAS-FFFIFVYL 95
Score = 33.1 bits (72), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
FI +YLHIGRG+YY S+
Sbjct: 90 FIFVYLHIGRGLYYGSY 106
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 72.5 bits (170), Expect = 4e-12
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYI 276
CLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS F F+++
Sbjct: 21 CLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 38.7 bits (86), Expect = 0.067
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNL 311
FIC++LH+GRG+YY S+N+
Sbjct: 72 FICLFLHVGRGVYYGSYNM 90
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 72.5 bits (170), Expect = 4e-12
Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASX-FLFAFIYISDEE 288
IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F +++I
Sbjct: 204 IQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHIL-RG 262
Query: 289 FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
+ L + + YVLP GQ+S+WGATVITNLLS IP L
Sbjct: 263 LNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATVITNLLSGIPAL 317
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 72.5 bits (170), Expect = 4e-12
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +1
Query: 115 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFL-FAFIYISDEEF 291
QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS F + +++ F
Sbjct: 45 QILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFFALTYAHVARGVF 104
Query: 292 TMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 447
L YVLP G +S+WG TVITN+++ +P
Sbjct: 105 YGAYLKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVITNMMTVVP 156
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 71.7 bits (168), Expect = 8e-12
Identities = 45/120 (37%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEE 288
IQIITGLFLT YY N E F + I YG ++ +H N +S F +++++
Sbjct: 38 IQIITGLFLTFYYE-NSENCFDSIYIIHIETFYGVLVHFIHLNVSSIIFFLIYLHMTKGL 96
Query: 289 FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
+ + + YVLP GQ+S WGATVITNLLSAIP +G ++V
Sbjct: 97 IFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGATVITNLLSAIPVIGKMMV 156
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 71.7 bits (168), Expect = 8e-12
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS F F IY+
Sbjct: 49 LVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMF-FIVIYLHMF 107
Query: 286 EFTMN---LLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + + Y+LP GQ+S+WGA VI NL +A+P +G
Sbjct: 108 RGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFAAVPVVG 167
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 68.9 bits (161), Expect = 5e-11
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISD 282
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+ F+ IY+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVAN-FMLGCIYVHI 99
Query: 283 EEFTMNLLT*NMYDL--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + +Y + YVLP GQ+++W A VI+++++AIP +G
Sbjct: 100 GR-GLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQVISSMVTAIPKVG 158
Score = 35.5 bits (78), Expect = 0.62
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 261 CIYLHIGRGIYYESFNL 311
CIY+HIGRG+YY SF L
Sbjct: 94 CIYVHIGRGLYYGSFRL 110
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/51 (56%), Positives = 42/51 (82%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXF 255
CL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGAS F
Sbjct: 39 CLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 67.7 bits (158), Expect = 1e-10
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEEF 291
IQI+TGL L +Y++ + AF + + R V +G ++R +H NGAS F+F +Y +
Sbjct: 40 IQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGAS-FIFMTMYAHMFKG 98
Query: 292 TM--NLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
M + + + L YV+P G +SFW ATVIT+ +SAIP LG
Sbjct: 99 LMYSSFMLPGSW-LTGNLILFLMILVAFMGYVIPWGNMSFWAATVITSFMSAIPILG 154
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 64.9 bits (151), Expect = 9e-10
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASXFLFAFIYISD 282
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS F F +Y+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLF-FIGVYLHM 112
Query: 283 EE---FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
+ + + YVLP GQ+SFWGA VI +L AIP +
Sbjct: 113 FRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLFGAIPVI 172
Query: 454 G 456
G
Sbjct: 173 G 173
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 64.1 bits (149), Expect = 2e-09
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
+ I +GLFL I YT +I AF V I R V G IR+LH G + LFA +YI
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVT-MLFACLYIHIG 111
Query: 286 E---FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + L YVLP GQ+S+WGATVI N + AIP +G
Sbjct: 112 RSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGATVILNAVHAIPLIG 171
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +1
Query: 1 KTXPIFKIINNXXXXXXXXXXXXXXXXXXXXXAXCLIIQIITGLFLTIYYTANIEIAFYR 180
K+ P+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNS 64
Query: 181 VNYICRNVNYG*IIRTLHANGASXFLFAFIYI 276
+ +I R+VN G ++R LH+N AS F F +Y+
Sbjct: 65 IEHIMRDVNNGWLVRYLHSNTASAFFF-LVYL 95
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 63.3 bits (147), Expect = 3e-09
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASX-FLFAFIYISDE 285
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS FL +I++
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVFLVIYIHMFTG 112
Query: 286 EFTMNLLT*N-MYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+ + M + Y+LP GQ+S+W A VITNL IP++G
Sbjct: 113 IYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNLFGGIPFIGDD 172
Query: 463 LV 468
LV
Sbjct: 173 LV 174
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 63.3 bits (147), Expect = 3e-09
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEE 288
IQII+GL L+ +Y ++ F + I ++V G IR +H++G S F+F +++I
Sbjct: 39 IQIISGLILSWFYFIDLSGGFKSLILIMQDVWGGWFIRFIHSSGVSLFMFIMYLHILRGL 98
Query: 289 FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILV 468
+ +++ YVLP G +S+WG TV+TN+LSAIP +G LV
Sbjct: 99 IYGSFCKVDVW-YSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNMLSAIPMVGVYLV 157
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 62.1 bits (144), Expect = 6e-09
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
+ IQ+ +GL L Y++ +A+ V I R V G ++R++H+N AS F+F +++
Sbjct: 35 MAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTAS-FVFFLMFM--- 89
Query: 286 EFTMNLLT*NMYD----LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 453
F ++ + Y + YVLP GQ+SFWGATVI NLLS +PY
Sbjct: 90 HFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIINLLSILPY- 148
Query: 454 GTILV 468
G +LV
Sbjct: 149 GKMLV 153
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 62.1 bits (144), Expect = 6e-09
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASX-FLFAFIYI-S 279
LI+QI++GL LT +Y E AF ++ + +G +R H+ G S F F FI+I
Sbjct: 31 LILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSVGVSFYFFFMFIHIIK 90
Query: 280 DEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 435
++ + + Y YVLP GQ+SFWGATVI+NLL
Sbjct: 91 GMWYSSKYMPWSWYS--GIVILILSIVIAFTGYVLPDGQMSFWGATVISNLL 140
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 59.7 bits (138), Expect = 3e-08
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYI--- 276
L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS F FA +YI
Sbjct: 56 LTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLF-FAALYIHMF 114
Query: 277 SDEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + L Y L GQ+S+W A VIT L S +P++G
Sbjct: 115 RGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVITGLFSVVPFVG 174
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 58.8 bits (136), Expect = 6e-08
Identities = 24/51 (47%), Positives = 40/51 (78%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFL 258
L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS FL
Sbjct: 32 LVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFL 82
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 58.4 bits (135), Expect = 8e-08
Identities = 24/31 (77%), Positives = 30/31 (96%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNL+SA+PY+GT++V
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIV 163
Score = 34.7 bits (76), Expect = 1.1
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 48 T*PI*YFFLMKYRIPTSXMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 227
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 228 ITC 236
ITC
Sbjct: 84 ITC 86
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEEF 291
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ + +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMVAVLLLHMLSVL 109
Query: 292 TMNLL--T*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTIL 465
M + L Y+LP Q+SFW TV TN AIP +G L
Sbjct: 110 FMGSYKRPRELNWLTGFILFNLVLGISLTGYLLPWSQLSFWATTVATNSAGAIPVIGGYL 169
Query: 466 V 468
V
Sbjct: 170 V 170
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 58.0 bits (134), Expect = 1e-07
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 235 ANGASXFLFA-FIYISDEEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWG 411
ANGAS F +I+I F + +T + + + YVLP GQ+SFWG
Sbjct: 1 ANGASFFFICLYIHIGRGIFYGSYMTFHAW-MIGVVILFMVMAAAFLGYVLPWGQMSFWG 59
Query: 412 ATVITNLLSAIPYLGTILV 468
ATVITNL SAIP++GT LV
Sbjct: 60 ATVITNLFSAIPFIGTDLV 78
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 57.6 bits (133), Expect = 1e-07
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = -3
Query: 257 KXNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHXASRDPIF 78
K N+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+H S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 77 HQEEILDGLGKSINELLMI 21
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 56.8 bits (131), Expect = 2e-07
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEE 288
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS F FA +++I
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFACYLHIFRAM 100
Query: 289 F--TMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+ M+ + Y L GQ S+W ATVIT AIP++G
Sbjct: 101 YYNVYRKPYLKMW-MISVTLYVLLMITAFLGYSLIWGQKSYWAATVITGFTRAIPWVGDT 159
Query: 463 L 465
L
Sbjct: 160 L 160
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLGTILV 468
YVLP GQ+SFWGATVITNLLSA+PY+G LV
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLV 162
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 56.4 bits (130), Expect = 3e-07
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 20/78 (25%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAF--------------------YRVNYICRNVNYG*II 222
CLI QIITGLFL ++YTA+ +AF V +ICR+VNYG ++
Sbjct: 4 CLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWLL 63
Query: 223 RTLHANGASXFLFAFIYI 276
R LHANGAS F F IY+
Sbjct: 64 RNLHANGAS-FFFICIYL 80
Score = 38.7 bits (86), Expect = 0.067
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESF 305
FICIYLHIGRG+YY SF
Sbjct: 75 FICIYLHIGRGMYYGSF 91
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 55.6 bits (128), Expect = 5e-07
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYI-SDE 285
IQI+ G+ L + + A+Y V +I R + G R +HA GAS F+ +++I
Sbjct: 38 IQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHILRGL 97
Query: 286 EFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 435
++ + L + + YVLP GQ+SFW TVITNLL
Sbjct: 98 NYSYSYLP--LSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTVITNLL 145
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 55.6 bits (128), Expect = 5e-07
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXF-LFAFIYIS 279
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS L +++
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF 102
Query: 280 DEEFTMNL-LT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
T + + Y LP QI +W ++T + AIP +G
Sbjct: 103 RVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIG 162
Query: 457 TILV 468
+ LV
Sbjct: 163 SPLV 166
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 103 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 228
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 52.4 bits (120), Expect = 5e-06
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
+++Q+I+G FL +Y + AF V I + +G +IR +H +G S +F +Y
Sbjct: 45 IVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHVDGVS-LIFILLYTHMF 103
Query: 286 E---FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
+ + + + YVLP G +S+W VIT+++ A+P +G
Sbjct: 104 RGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVITSIMHALPVVG 163
Query: 457 TILVN*T 477
L T
Sbjct: 164 PSLTTLT 170
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYISDE 285
++Q +TGLFL +YY E AF V I V +G IR+LH A+ L F+++
Sbjct: 43 LVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHMLRV 102
Query: 286 EFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+T + + L Y+LP Q+S+W + + ++P +G
Sbjct: 103 YYTGSFKKPRELNWLAGCFLLVLSLGLAFTGYLLPYEQLSYWASVIGAETAGSLPVVGAT 162
Query: 463 L 465
+
Sbjct: 163 M 163
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 47.6 bits (108), Expect = 1e-04
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFL-FAFIYISDE 285
++Q++TG+ L +YY +E A+ V +I V G +R++H A+ L ++
Sbjct: 45 LVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVVLHFLRV 104
Query: 286 EFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
FT ++ + Y+LP Q+ +W A + T +L +IP +G
Sbjct: 105 VFTGAYKPPRQFNWVVGVLLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILGSIPIVGDQ 164
Query: 463 LV 468
L+
Sbjct: 165 LL 166
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 47.6 bits (108), Expect = 1e-04
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +3
Query: 126 WIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WS-FIXFICIYLHIGRGIYY-- 296
W +N L + + L + Y P+ KL L+ S WS + + H R + +
Sbjct: 5 WPTISNTLLTGHLLRLLLNCTYHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLI 64
Query: 297 -ESFNLKYV*SNWNYNSIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 458
S NLK+ +Y Y ++N FH L +R NI LG N N+K I NP++RN
Sbjct: 65 SPSRNLKHR----HYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYI 276
L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS F F +Y+
Sbjct: 40 LASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLF-FIVVYL 95
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYI 276
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N S F+ F++I
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHI 94
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 192 LPKCKLWLNNSNITC*WSFIXFICIYLHIGRGIYYESFNLKYV*SNWNYNSI 347
LP+ KLWL+ S + + + F+C+++HIGRG+YY SF L WN I
Sbjct: 6 LPRRKLWLSYSLPSRNGASMFFLCLFIHIGRGLYYGSFTLS---ETWNIGII 54
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS 249
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGAS 99
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 385 P*GQISFWGATVITNLLSAIPYLGTILV 468
P GQ+SFWGATVITNL+SAI Y+G +V
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVV 29
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 391 GQISFWGATVITNLLSAIPYLGTILVN 471
GQ+ FWGATVITN LS IPY G +VN
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVN 31
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 42.7 bits (96), Expect = 0.004
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFL-FAFIYISDE 285
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA + +++
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVILHMLRT 145
Query: 286 EFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
FT + + Y+LP Q++FW T+ +++ A P +G
Sbjct: 146 YFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTIGSSMADAAPGVG 203
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 42.3 bits (95), Expect = 0.005
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAF-IYISDE 285
I + TG L YY + +AF + Y+ +V +G ++R +H GA + +++
Sbjct: 82 ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVIMVELHMFRV 141
Query: 286 EFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
T + ++ + Y+LP Q+ FW TV TN+ A P LG
Sbjct: 142 FLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMARATPLLG 199
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 41.5 bits (93), Expect = 0.009
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +3
Query: 72 LMKYRIPTSXMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSF- 248
+MK + + N ++ I +N L++ + NS L +LP+ KLWLN T
Sbjct: 1 MMKLWLSPRHLLNFTDSNRPIPSNTLYTXHNNSILLCNPHLPRRKLWLNYPIYTRKRGIN 60
Query: 249 IXFICIYLHIGRGIYYESFNLKYV*SNWNYNS---IYTNSNCFHRLCLTLRSNIFL 407
I ++ IY R I + + Y+ N + S I NS+ HRLC T+R NI L
Sbjct: 61 IFYLPIYACRTRPILW----IIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 210
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 112 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXF 255
+Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S F
Sbjct: 39 MQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLF 86
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 40.3 bits (90), Expect = 0.022
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASXFLFAFIY 273
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMVVLVGA 109
Query: 274 ISDEEFTMNLL--T*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIP 447
+ F + L Y+LP + ++WG V TN++ +P
Sbjct: 110 HLLQVFLWGAYKRPREIMWLVGVILLALTMTAAFTGYLLPWDERAYWGTIVGTNMIGLVP 169
Query: 448 YLGTIL 465
+G +L
Sbjct: 170 VVGPLL 175
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 39.9 bits (89), Expect = 0.029
Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLF-AFIYISD 282
+IIQ+ +G+ L+++Y + + + N+ Y IIR +H S F +++I
Sbjct: 32 MIIQVFSGIVLSLFYDVLGNFSMLMM-WTDDNI-YCWIIRYIHIWCVSIIFFLVYVHIGR 89
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
+ + ++++ Y+LP Q+S+W ATV+T+++ ++P +G +
Sbjct: 90 SLYYSSYRMIGVWNVGFFIYVILMVEAFLG-YILPWHQMSYWAATVLTSIILSVPVVGGL 148
Query: 463 L 465
+
Sbjct: 149 I 149
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 39.1 bits (87), Expect = 0.051
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLKYV*SNWNYNSI 347
FICIYLHIGRG+YY S+ K WN I
Sbjct: 57 FICIYLHIGRGLYYGSYMNK---ETWNVGII 84
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 38.7 bits (86), Expect = 0.067
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLGTIL 465
YVLP +S+WG TV +N+L+ +P +GT L
Sbjct: 104 YVLPCTMMSYWGLTVFSNILATVPVIGTWL 133
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 38.7 bits (86), Expect = 0.067
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +1
Query: 169 AFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYI 276
AF V YI VNYG I R H NGAS F F F+Y+
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLF-FVFLYL 36
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 37.9 bits (84), Expect = 0.12
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFL-FAFIYISDE 285
+I + TG+ L YY + A+ R+ + V +G +R +H A + F+++
Sbjct: 81 VILVATGILLMFYYVPSTTQAYDRMLDLRGTVAFGTFLRNMHRWSAHGMVAIVFLHMCRV 140
Query: 286 EFTMNLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
FT + ++ + Y+LP Q++FW TV T++ P +G
Sbjct: 141 FFTGSYKKPREFNWVLGVVLFLLTLFLSFTGYLLPWDQLAFWAITVGTSIAGYAPVVG 198
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 37.5 bits (83), Expect = 0.15
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 102 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIXFICIYL 272
+ N N +W + + LH ++ N F +LP+CKL L +S TC W I + +YL
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWR-ILLLHLYL 62
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 37.1 bits (82), Expect = 0.20
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH--ANGASXFLFAFIYISD 282
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH A L A ++
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLHHFMAQAMIVLLALHFLQV 104
Query: 283 EEFTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLG 456
Y+LP Q +W V T L+ IP +G
Sbjct: 105 VIDGAYKAPREFNFWTGLILMKIVLGLSLTGYLLPWDQKGYWATKVATTLMGLIPAIG 162
>UniRef50_Q4YJZ2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 67
Score = 37.1 bits (82), Expect = 0.20
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLKYV*SNWNYNSIYT 353
FI +Y+ I Y+ SF LKY +NYN IYT
Sbjct: 13 FILVYVEILNKYYFNSFKLKYCAHGYNYNYIYT 45
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 36.3 bits (80), Expect = 0.36
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-XFLFAFIYI 276
IIQI+TGL L YY AF +I V +G +IR +HA A+ L FI++
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHM 174
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 35.9 bits (79), Expect = 0.47
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +1
Query: 121 ITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFA-FIYISDEEFTM 297
+TG++L YY ++ A+ + + +V +G R LH A + A +++++ +T
Sbjct: 71 VTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHMTRVFYTG 130
Query: 298 NLLT*NMYD-LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
+ ++ + Y+LP Q+++W V +N+ P +GT
Sbjct: 131 SYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMAKVTPVIGT 185
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 35.9 bits (79), Expect = 0.47
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLGTIL 465
Y+LP Q+S+W T++TN+L +P +G L
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNL 74
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 35.5 bits (78), Expect = 0.62
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFI 270
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+ FL A I
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSAN-FLMAVI 109
>UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 302
Score = 35.5 bits (78), Expect = 0.62
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 204 KLWLNNSNITC*WSFIXFICIYLHIG 281
KLW+ S+ITC WS + F IY H G
Sbjct: 259 KLWIRYSSITCTWSNLKFYSIYRHTG 284
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 35.1 bits (77), Expect = 0.82
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLG 456
Y+LP Q+++W TV TN+ SA+P +G
Sbjct: 169 YLLPWDQLAYWAVTVGTNIASAVPLVG 195
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 35.1 bits (77), Expect = 0.82
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 376 YVLP*GQISFWGATVITNLLSAIPYLG 456
Y LP +S+WG TV +N+L+ IP +G
Sbjct: 133 YTLPCTSMSYWGLTVFSNILATIPLIG 159
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -3
Query: 443 IADNRFVITVAPQKDI*PQGKT 378
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 33.9 bits (74), Expect = 1.9
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 2/121 (1%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEE 288
++Q TG+ L Y A+ + YI + G ++R LH GAS + + +
Sbjct: 49 MVQAFTGILLAFNYAPTPGEAYNSLRYILTELTAGRLMRGLHHWGASMIIVVVVLHMVQV 108
Query: 289 FTMNLL--T*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTI 462
F + Y+LP ++WG V T + + P +G
Sbjct: 109 FLYGAYKKPREATWMVGVVLFLVTLAYGLTGYLLPWDNRAYWGTVVATKIAAQAPVVGPY 168
Query: 463 L 465
L
Sbjct: 169 L 169
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 33.5 bits (73), Expect = 2.5
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEE 288
++Q++TG+ L + Y + A+ + + +++ G IR LH G S F+ A + + +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWG-SNFMIAVVLVHMAQ 107
Query: 289 ---FTMNLLT*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
F + + V+ Q ++WG + +++S +P LG
Sbjct: 108 VFLFGAYKYPRELTWILGVFLLLVTLAMGFTGQVMRFDQDAYWGLGIGASIVSRVPLLGP 167
Query: 460 ILV 468
LV
Sbjct: 168 WLV 170
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 33.5 bits (73), Expect = 2.5
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Frame = +1
Query: 109 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDEE 288
I+++ITG + +YYT + + Y+ V YG + +LH+ GA +F +
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLLVHMTRN 147
Query: 289 FTMNLL--T*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPY-LGT 459
F + + + Y LP IS+ T NL S +P+ LG
Sbjct: 148 FFVGAYRQPREIMWIVGAGLAGLTLTEAYLGYSLPYNLISWVATTTGLNLFSYMPFNLGY 207
Query: 460 IL 465
++
Sbjct: 208 LI 209
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 33.1 bits (72), Expect = 3.3
Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Frame = +1
Query: 106 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASXFLFAFIYISDE 285
L++QI+TG+ L + Y A+ + Y+ +G ++R +H A+ + + +
Sbjct: 51 LMLQIVTGVCLAMIYQPTAADAYASLEYLNYEAPFGWLLRAIHYWSATGMVVMLMVHMTQ 110
Query: 286 EFTMNLL--T*NMYDLXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGT 459
F M + + VL S+WG +V + +P+ G
Sbjct: 111 VFLMGAFKYPRELTWIVGVGLLTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAGRVPFAGP 170
Query: 460 ILVN 471
+V+
Sbjct: 171 SIVH 174
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 4.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 205 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIXLVGILYFIKKKY 62
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
>UniRef50_Q2FUM1 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 252
Score = 32.7 bits (71), Expect = 4.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 279 GRGIYYESFNLKYV*SNWNYN-SIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFR 455
G I+Y FN +YV ++ YN +IY+ S ++ +T+ F NY+ + + +
Sbjct: 163 GFNIFYALFNREYVNTDHRYNFTIYSLSKIVYQAGMTVDRYWFCQSKPNYQITLGQKILK 222
Query: 456 N--YISKLNF 479
N Y+ K+ F
Sbjct: 223 NSFYLQKIFF 232
>UniRef50_Q98QY0 Cluster: Putative uncharacterized protein
MYPU_2300; n=1; Mycoplasma pulmonis|Rep: Putative
uncharacterized protein MYPU_2300 - Mycoplasma pulmonis
Length = 312
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 294 YESFNLKYV*SNWNYNSIYTNSNCFHRLCLTLRSNIFL 407
Y++FNL S+WNYN I + F + L L+ ++L
Sbjct: 126 YDNFNLVLNKSSWNYNEILKRNTQFKLIDLVLQVQLYL 163
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 31.9 bits (69), Expect = 7.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 255 FICIYLHIGRGIYYESFNLKYV 320
FI +YLHI RG+YY S+ ++V
Sbjct: 27 FIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q8ILJ6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2084
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 306 NLKYV*SN-WNYNSIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRNYISKLN 476
N+ V +N +N +SIY NSN ++ + SNI+ N +I N ++ N I N
Sbjct: 970 NINNVNNNIYNNSSIYNNSNIYNNSSIYNNSNIYNNSNIYNNNIYNNNIYNNNIYNNN 1027
>UniRef50_Q8I447 Cluster: DNA repair protein, putative; n=3;
Plasmodium|Rep: DNA repair protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1350
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 324 SNWNYNSIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLF--RNYISKL 473
+N NY +IY N NC + + + L + NY++++ N + RNY+ L
Sbjct: 185 NNNNYGNIYRNDNCVVKSNECNNNGVELDEDSNYQNMVHNQMLEGRNYMDNL 236
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,781,543
Number of Sequences: 1657284
Number of extensions: 6213876
Number of successful extensions: 12986
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 12422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12937
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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