Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0834
(481 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 0.97
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 5.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 5.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 5.2
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 6.9
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 0.97
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 369 HRLCLTLRSNIFLGGNRNYKSIICNPLFRNYISKLNF 479
H++ +L SN + N NYK + CN +R +N+
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCNN-YRKLYYNINY 113
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 369 HRLCLTLRSNIFLGGNRNYKSIICN 443
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 369 HRLCLTLRSNIFLGGNRNYKSIICN 443
H++ +L SN + N NYK + CN
Sbjct: 79 HKIISSL-SNNYNYNNNNYKKLYCN 102
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 226 FELFNHSLHFGKYNLLYKKLFQYLLCNI 143
++ N++ + YN YKKL Y + NI
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNIINI 116
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 214 NHSLHFGKYNLLYKKLFQYLLCNI 143
N++ + YN YKKL Y + NI
Sbjct: 97 NYNNYNNNYNTNYKKLQYYNIINI 120
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 90 NNYNYNNNYNNYN 102
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 139 TIYYTANIEIAFYRVNYICRNVNY 210
T++YT N+ + ++++C V Y
Sbjct: 233 TLFYTVNLILPTVLISFLCVLVFY 256
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 323 NNYNYNNNYNNYN 335
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 324 SNWNYNSIYTNSN 362
+N+NYN+ Y N N
Sbjct: 323 NNYNYNNNYNNYN 335
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 133 FLTIYYTANIEIAFYRVNYICR 198
F+ +Y+A+ +AF+R+ CR
Sbjct: 357 FIYAFYSADFRLAFWRLT--CR 376
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,981
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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