Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0833
         (594 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1572 - 34527730-34527859,34528077-34528136,34528253-345283...    30   1.2  
12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379     27   8.5  

>04_04_1572 -
           34527730-34527859,34528077-34528136,34528253-34528375,
           34528506-34528960,34529343-34529876,34530638-34531501
          Length = 721

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 339 QLISAKLRITY*MLFFIALVGRRAYGPSVVSGYRRPWTSAM-SVADPSRCLPH 184
           +L  + LRIT   L  +  VG  A G    SGY  PWT    S+ DP+    H
Sbjct: 304 KLFKSFLRIT---LTCVITVGTLALGIGTASGYISPWTGRFYSLLDPTYAKDH 353


>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
          Length = 881

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 117 WLNKLNKADRHLENRSSLFLKQLNIGDD 34
           W NK+ +    +E+   LF+ +LN GDD
Sbjct: 69  WRNKVRELSYDIEDCIDLFMHKLNRGDD 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,264,884
Number of Sequences: 37544
Number of extensions: 307285
Number of successful extensions: 751
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)