Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0833
(594 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated sodi... 27 0.60
Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium... 26 1.1
AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel pro... 26 1.1
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 26 1.1
DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium c... 25 1.4
DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated sodi... 25 1.4
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 25 2.4
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.4
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.4
AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel pro... 24 3.2
AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel pro... 24 3.2
>DQ022108-1|AAY51996.1| 66|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 66
Score = 26.6 bits (56), Expect = 0.60
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N+ + N LAL
Sbjct: 18 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNSVVLNLFLAL 61
>Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 136
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 70 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 113
>AY615653-1|AAU05110.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615652-1|AAU05109.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615651-1|AAU05108.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615649-1|AAU05106.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615648-1|AAU05105.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615647-1|AAU05104.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615646-1|AAU05103.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615628-1|AAU05085.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615618-1|AAU05075.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615617-1|AAU05074.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615616-1|AAU05073.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615614-1|AAU05071.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615610-1|AAU05067.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615609-1|AAU05066.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615608-1|AAU05065.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AY615570-1|AAU05027.1| 71|Anopheles gambiae sodium channel
protein.
Length = 71
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 70
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 25.8 bits (54), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 985 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLAL 1028
>DQ263748-1|ABB84470.1| 78|Anopheles gambiae para-type sodium
channel variant 1 protein.
Length = 78
Score = 25.4 bits (53), Expect = 1.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 24 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNFVVLNLFLAL 67
>DQ022109-1|AAY51997.1| 66|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 66
Score = 25.4 bits (53), Expect = 1.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLAL 143
R +CGEW+ S D +VS P L T + N + N LAL
Sbjct: 18 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNFVVLNLFLAL 61
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 24.6 bits (51), Expect = 2.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 452 EVDITNYIIYRTFFLHYTHXIIIYLKEIVVCIIRCLICAVP 574
E DIT YII R L YT +I L +++ + L+ +P
Sbjct: 219 ETDITFYIIIRRKTLFYTVNLI--LPTVLISFLCVLVFYLP 257
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 455 PHIQSVFVYKGFIISTNYYRRKYYYDSFRKLS*YNLHCNS*FQPSFALLT 306
P +++ F+ K F+ + +R Y ++ RKL +LH + F P ++ T
Sbjct: 342 PWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLH--ACFYPYYSTTT 389
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 455 PHIQSVFVYKGFIISTNYYRRKYYYDSFRKLS*YNLHCNS*FQPSFALLT 306
P +++ F+ K F+ + +R Y ++ RKL +LH + F P ++ T
Sbjct: 342 PWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLH--ACFYPYYSTTT 389
>AY615615-1|AAU05072.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 24.2 bits (50), Expect = 3.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLA 146
R +CGEW+ S D +VS P L T + N + N LA
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLA 69
>AY615612-1|AAU05069.1| 69|Anopheles gambiae sodium channel
protein.
Length = 69
Score = 24.2 bits (50), Expect = 3.2
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 265 RPICGEWLPSPMD---FSNVSGRPKPLPTACLKNTNLFNGXLA 146
R +CGEW+ S D +VS P L T + N + N LA
Sbjct: 27 RVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLA 69
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,731
Number of Sequences: 2352
Number of extensions: 13930
Number of successful extensions: 36
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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