Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0833
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ086830-1|AAZ78652.1|  134|Homo sapiens KARMA protein.                30   5.4  
DQ086829-1|AAZ78651.1|  134|Homo sapiens KARMA protein.                30   5.4  
BC112065-1|AAI12066.1|  374|Homo sapiens potassium channel, subf...    30   7.1  
BC112063-1|AAI12064.1|  374|Homo sapiens potassium channel, subf...    30   7.1  
BC075080-1|AAH75080.1|  374|Homo sapiens potassium channel, subf...    30   7.1  
BC075079-1|AAH75079.1|  374|Homo sapiens potassium channel, subf...    30   7.1  
AY190605-1|AAO38739.1|  374|Homo sapiens breast cancer amplified...    30   7.1  
AF279809-1|AAF85982.1|  374|Homo sapiens 2P domain potassium cha...    30   7.1  
AF257080-1|AAG33126.1|  374|Homo sapiens two pore potassium chan...    30   7.1  
AF248241-1|AAG31730.1|  374|Homo sapiens 2P domain potassium cha...    30   7.1  
AF212829-1|AAF63708.1|  374|Homo sapiens potassium channel TASK3...    30   7.1  

>DQ086830-1|AAZ78652.1|  134|Homo sapiens KARMA protein.
          Length = 134

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -3

Query: 358 NIICTATVDFSQASHYLLNAFFYCPCRQTSIRPICGEWLPSPMDFSNVSGRPKPL 194
           +I+C+     S+ SH      +  PC Q+ + P      P+P ++S +SG P  L
Sbjct: 39  HILCSQPNACSRQSHVSYPNPWGLPCSQSKVSPPGTATNPNPKEWSRISGPPVSL 93


>DQ086829-1|AAZ78651.1|  134|Homo sapiens KARMA protein.
          Length = 134

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -3

Query: 358 NIICTATVDFSQASHYLLNAFFYCPCRQTSIRPICGEWLPSPMDFSNVSGRPKPL 194
           +I+C+     S+ SH      +  PC Q+ + P      P+P ++S +SG P  L
Sbjct: 39  HILCSQPNACSRQSHVSYPNPWGLPCSQSKVSPPGTATNPNPKEWSRISGPPVSL 93


>BC112065-1|AAI12066.1|  374|Homo sapiens potassium channel,
           subfamily K, member 9 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>BC112063-1|AAI12064.1|  374|Homo sapiens potassium channel,
           subfamily K, member 9 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>BC075080-1|AAH75080.1|  374|Homo sapiens potassium channel,
           subfamily K, member 9 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>BC075079-1|AAH75079.1|  374|Homo sapiens potassium channel,
           subfamily K, member 9 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>AY190605-1|AAO38739.1|  374|Homo sapiens breast cancer amplified
           potassium channel protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>AF279809-1|AAF85982.1|  374|Homo sapiens 2P domain potassium
           channel Task-3 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>AF257080-1|AAG33126.1|  374|Homo sapiens two pore potassium channel
           KT3.2 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>AF248241-1|AAG31730.1|  374|Homo sapiens 2P domain potassium
           channel protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


>AF212829-1|AAF63708.1|  374|Homo sapiens potassium channel TASK3
           protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 403 IIVENTIMTVFENCHNIICTATVDFSQASHY-LLNAFFYCPCRQTSI 266
           + +EN +   F +C   +C     FSQ   +   +A++YC    T+I
Sbjct: 154 VSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,912,130
Number of Sequences: 237096
Number of extensions: 1711709
Number of successful extensions: 6946
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6945
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)