Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0826
         (337 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   0.86 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   6.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   6.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   8.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   8.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   8.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   8.0  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 0.86
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -1

Query: 307 P*AGTSG-PPQRPGAQAQRKHS 245
           P AG  G PPQ P  ++QR+++
Sbjct: 265 PTAGAGGLPPQVPSPRSQRRYT 286


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +3

Query: 42  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 218
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -1

Query: 328 TPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
           T  G  +   GT     RP  Q+ R+H  +  D   R
Sbjct: 237 TDDGKNQQRTGTELTKMRPKRQSSRRHRKNLKDPCRR 273


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 328 TPPGGAEP*AGTSGPPQRP 272
           +P G   P   + GPP  P
Sbjct: 109 SPSGNVPPLTPSPGPPSHP 127


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 335 AGHPSGRCRAVSRDIRTTTEAR 270
           AG+P+G  R   R+  T T A+
Sbjct: 59  AGYPAGNQRKQRRERTTFTRAQ 80


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 288 DHHRGPAPRHSGNTR 244
           D  R P P+H G  R
Sbjct: 210 DESRTPRPKHDGRGR 224


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 231  TELSACCRERSE 196
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 231  TELSACCRERSE 196
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 231  TELSACCRERSE 196
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 231  TELSACCRERSE 196
            TEL+ CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 4  LRPNGLRRNFSPKLF 48
          +R NGL  NF+ K +
Sbjct: 42 IRKNGLNYNFTKKCY 56


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 267 APGLCGGPDV 296
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 267 APGLCGGPDV 296
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 267 APGLCGGPDV 296
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 267 APGLCGGPDV 296
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,415
Number of Sequences: 336
Number of extensions: 1835
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)