Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0826
(337 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 0.23
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 30 0.54
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.54
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 29 0.71
SB_44680| Best HMM Match : Gemini_V1 (HMM E-Value=4) 29 0.94
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 29 0.94
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0) 28 1.6
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 28 1.6
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 28 2.2
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 27 2.9
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 2.9
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28) 27 3.8
SB_22536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 27 5.0
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 27 5.0
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 27 5.0
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 26 6.6
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 26 6.6
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5) 26 8.7
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 26 8.7
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 26 8.7
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 26 8.7
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 26 8.7
SB_9797| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 26 8.7
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 26 8.7
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 26 8.7
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 26 8.7
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 26 8.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 26 8.7
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -2
Query: 312 QSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHF 133
+SR + + R +PR +R P P S R RS +PR R+ SR RR
Sbjct: 225 RSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRS 284
Query: 132 H 130
H
Sbjct: 285 H 285
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 333 RSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWS 154
RSP R +SR + R P+P H + R + + RS +P HR SR
Sbjct: 229 RSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTHRRHRSRSHSP 287
Query: 153 RRSPH 139
+ H
Sbjct: 288 EKKKH 292
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
PP PPG P + SGP + P + R S+ + RL D +P
Sbjct: 3 PPPPPPGPPPPPSAPSGPVKPPPSSKNRGALLSDIHKGARLKKTVTNDRSAP 54
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 279 RGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 139
R P R +R P+ S+ CR R R R+ SR RSP+
Sbjct: 293 RSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPY 339
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -2
Query: 327 PLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRR 148
P A S + + H P P HS + R T +A S P HR P P ++
Sbjct: 447 PSHATMSDARLNTSTHLAPTPHHSSD-RPHHATSYNA----PSGMPTHREPPPHPSFASH 501
Query: 147 SPHH 136
P+H
Sbjct: 502 QPYH 505
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -2
Query: 282 HRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 136
HR P P S + +P C S HR P P ++ P+H
Sbjct: 489 HREPPPHPSFASHQPYHV---TSCDALSGMQTHREPPPHPSFASHQPYH 534
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -2
Query: 282 HRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 136
HR P P S + +P C S HR P P ++ P+H
Sbjct: 518 HREPPPHPSFASHQPYHV---TSCDALSGMQTHREPPPHPSFASHQPYH 563
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 282 HRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 136
HR P P S + +P A C S P HR P P+ + HH
Sbjct: 547 HREPPPHPSFASHQPYHV---ASCDALSGMPTHRVPPPHPLSAPYRLHH 592
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 29.5 bits (63), Expect = 0.71
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE 179
P PPG GA+ G GPP G + +R R + PG +R+AP E
Sbjct: 159 PAGPPGQPGADGKQGIRGPP---GIKGERGPKGDVGPRGLKGEPGRIRNAPRAE 209
>SB_44680| Best HMM Match : Gemini_V1 (HMM E-Value=4)
Length = 248
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -2
Query: 294 HQDHHRGPAPRHSGNTRRPKP-----TELSACCRERSETPRHRN 178
H+D RGP RH G TR P L E+ T RHR+
Sbjct: 194 HRDAARGPKERHDGRTRAVHPDIKIRISLFTDWFEKKATARHRD 237
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 333 RSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRP-VW 157
R V++ + +Q + R H+ + P +L C S TP N+P+ P V+
Sbjct: 766 RPTAEEVENELEAYQSYIRSSGEDHAPESPPPLRKQLIPICNSSSSTPVDENEPTFPDVF 825
Query: 156 SRRSP 142
SP
Sbjct: 826 EPPSP 830
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 312 QSREQGHQDHHRGPAPRHSGN--TRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 139
QS+ + + P P+ S + +P+P S R + KP P+ SR++P
Sbjct: 457 QSQNTAYPESPDTPQPQASSSFLPEQPRPRSHSQTSRRSRASTSESRKPRDPLGSRQAPG 516
Query: 138 H 136
H
Sbjct: 517 H 517
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
PP PP G GPP PG Q K + D + +
Sbjct: 1266 PPFMPPPPRMQPPGPPGPPGPPGPQPSNKREHEDDDASNK 1305
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP 272
PP PPGG+ P G PP P
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLPP 975
>SB_52347| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 687
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 273 PAPRHSGNTRRPKPTELSACCRERSETPRH 184
P +GN+RR P EL+ +E+P+H
Sbjct: 2 PVRTRAGNSRRRVPKELNGVSHSANESPQH 31
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAP 188
P PPG GA+ G GPP G + ++ + + + PG +RDAP
Sbjct: 48 PRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAGPRGLKGD---PGKIRDAP 95
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGAL 200
PP P P G + G G P PG + +R + S+ + E PG L
Sbjct: 103 PPGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPL 149
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE 179
PP TPP G GP G + + DR ER G+ D P E
Sbjct: 92 PPPTPPPQRRGPPGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGS--DGPKGE 142
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 319 GGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
GG + G G P PGA R + D ER PGA
Sbjct: 387 GGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGA 425
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPK--PTELSACCRERSETPRHRNKP-SR 166
R P+ +S+ G + + P S T +P PT A +R+ TP ++ KP S+
Sbjct: 317 RVKPVSMPESKPAGPKKPDKLILPDRSSPTGKPSRVPTPSKATPSKRATTPNNKGKPNSK 376
Query: 165 PVWSRRSP 142
P + P
Sbjct: 377 PSTPNQPP 384
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -2
Query: 333 RSPLRAVQSREQGHQDHHRGPAP-RHSGNTRRPKPTELSACCRERSE-TPRHRNKPS-RP 163
RSPL + R++G +H P P R R P + R RS +P R +P P
Sbjct: 833 RSPLAEERVRDRGRDNHSISPEPNRLHRINRSPVADDYLPALRHRSSVSPDPRGRPPISP 892
Query: 162 VWSRRSP 142
+ R P
Sbjct: 893 DYRGRHP 899
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 246 ECFRCAWAPGLCGGPDVPAHGS 311
E R W+ LCGGPD+ GS
Sbjct: 107 EITRSWWSSRLCGGPDINDDGS 128
>SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28)
Length = 115
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -2
Query: 333 RSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWS 154
+ P + +Q H+ R P H + +P E+S C ++ +E R +P++
Sbjct: 46 QQPNEMSRCTQQPHE-MSRCTQPPHEMSRCTQQPNEMSRCTQQPNEMSRCTQQPNKMSRC 104
Query: 153 RRSPH 139
+ PH
Sbjct: 105 TQQPH 109
>SB_22536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 186 DGASLSAPGSKRSALSASDAECFRCAWAPGLCGGPDVPAHGSAPPGGVTG 335
+GA + GS+ S E W G GG + +G PPG V G
Sbjct: 229 NGAGCARLGSQHGERGGSITE----GWVGGKAGGMNSGYNGGPPPGAVGG 274
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 9/55 (16%)
Frame = -2
Query: 273 PAPRHSGNTRRPKPTELSACCRERSETP---------RHRNKPSRPVWSRRSPHH 136
P PR + R+P P S C + TP H + S P +S HH
Sbjct: 385 PTPRVLDSPRKPLPAYTSPCVHQSPRTPVPTYFTPRIHHSPRTSLPAYSTPRVHH 439
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNT---RRPKPTELSACCRERSETPRHRNK 175
R SP R +SR + +D + N+ +R KP E R+RS +PR R++
Sbjct: 158 RPSPHR--RSRPRNRKDRQLDKKTKTLPNSYAPKRDKPRERKKVARDRSRSPRSRSR 212
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Frame = -2
Query: 327 PLRAVQSREQGHQDHHR-----GPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRP 163
P A+ E+ +D H+ + + + + + S RER + HR++ R
Sbjct: 277 PTTAITEEEEDSEDIHKELLKAAASKKQDRKWKEERVKQESKDLRERISSSEHRHRDGRE 336
Query: 162 VWSRRSPHH 136
W R P H
Sbjct: 337 SW-REKPKH 344
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 240 PKPTELSACCRERSETPRHRNKPSRPV 160
P+PT+ R+R T R KP++P+
Sbjct: 283 PRPTKAKPTTRKRMPTERPTKKPTKPL 309
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 312 QSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSR 166
+++E+G Q + PA RHS + + LS C S HR R
Sbjct: 3161 KAKEKGKQSKEKDPARRHSSGSE----SSLSQCSTSSSPKLSHRGSFKR 3205
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 288 DHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRP 163
D P RH G RRP P + R TP P RP
Sbjct: 481 DFPTNPVGRHDG--RRPTPMAAAYQSRTHPSTPPRTVPPQRP 520
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 298 GTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
G GPP RPG Q+ R R PG+
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGS 160
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 309 SREQGHQDHHRGPAPRH-SGNTRRPKPTELSACCRERSETPRHRNKPSR 166
SR Q H + RGPA R S + +P T S + +PR K ++
Sbjct: 812 SRSQSHDKNKRGPAFRSLSLDRSKPALTSRSRSLDRNTTSPRLETKSNK 860
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 222 SACCRERSETPRHRNKPSRPVWSRRSP 142
S+ ++ + +P + PS+P WSR +P
Sbjct: 450 SSAFQKNTPSPSPKTTPSKPSWSRPTP 476
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = -2
Query: 321 RAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 151
R Q R++ HQ+ P + T P P + R RH S +SR
Sbjct: 553 RRGQYRKRDHQNEENNTKPPKTSRTSSPSPDNPNRSRRTSPNARRHSGSSSDSHFSR 609
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = -2
Query: 318 AVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 139
A Q R ++ + + RP+ + S + R +P HR + P RSP
Sbjct: 398 AEQRRHLREEERRLSQTQENRDSKFRPESDDPSDKNQHRERSPGHRRRSQSPRRRSRSPG 457
Query: 138 H 136
H
Sbjct: 458 H 458
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = -2
Query: 318 AVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACC 211
++ E+G+Q P P +RP PT + C
Sbjct: 1032 SLHEEEKGNQKQEASPHPPRGRKRKRPTPTTTTEGC 1067
>SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5)
Length = 270
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 306 REQGHQDHHRGPAPRHSGNTRRPKP 232
RE+ HR PAPR + N R KP
Sbjct: 121 REEDISTSHRLPAPRPNPNQRPAKP 145
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 183 RNKPSRPVWSRRSPHHFHC 127
+NK V S +SPHH HC
Sbjct: 589 KNKKIVSVPSGKSPHHLHC 607
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 214 LPGALR--DAPSPE*TFSTCLVSTESTPFP 131
LPGA R AP+P+ T +T L TE P P
Sbjct: 198 LPGASRAAPAPTPQPTAATPLPETEPEPEP 227
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 144 DSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFRCAWAPGLCGGPDVPAHGSAP 317
DS+E K + S S S PG +R+ + C C + C D P AP
Sbjct: 192 DSIEMKHSRCLDSSPRRSSSKPGPRRADCYVNLCCCVTCRCSVCTCCPCDCPCLQCAP 249
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 90 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 209
Q + S K G+G + E KQ EK GDG S P
Sbjct: 553 QPASKSKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 592
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -1
Query: 337 PPVTPPGGAE--P*AGTSGPPQRP 272
PPVTPP G E P T PP P
Sbjct: 133 PPVTPPPGPETPPPPDTPAPPVPP 156
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQA 260
PP PPGG A PP PG A
Sbjct: 663 PPPPPPGGQAGGAPPPPPPPLPGGAA 688
>SB_9797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 132 GNGVDSVETKQVEKVYSGDGASLSAPGSKR-SALSASDAECFRCAWAPGLCGGPDVPAHG 308
G+G E +E+V + DG + A GSK A SA+ +E A A G +VPA G
Sbjct: 22 GSGDVEGEDLALERVPTADGGASQAEGSKAGEAASATGSE----ANAEGGEENAEVPAEG 77
Query: 309 S 311
+
Sbjct: 78 A 78
>SB_982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -2
Query: 315 VQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRS 145
+Q+ E+G+Q+ + P PR PK + R + R R P PV + RS
Sbjct: 361 LQADERGNQEDEKKPVPRARSAGSVPKSPAVREEAPSRPSSAR-RPLPRPPVLTPRS 416
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 264 RHSGNTRRPKPTELSACCRERSETPRHRN-KPSR 166
R S N R P P S R S +PR R+ PSR
Sbjct: 552 RTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSR 585
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 207 PGSKRSALSASDAECFRCAWAPGLCGGPDVPAH 305
P +R L +D RC GL GP+ PAH
Sbjct: 400 PLRERHELRKNDCRRCRCCRFEGLPRGPEDPAH 432
>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
Length = 573
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -2
Query: 330 SPLRAVQSREQGHQDHHRGPAP-RHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWS 154
SPL + Q + GPA R+SG T +P T+ S + + KPS
Sbjct: 417 SPLGSKQEQFAQSDAFKTGPAEFRYSGTTDKPSKTQNSDNSNDTKPAHDNGGKPSTQATK 476
Query: 153 RRSPHH 136
+ H
Sbjct: 477 NQHDSH 482
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2
Query: 282 HRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 142
HR +P +GN R+ PT + R RS +P + S+ V RR P
Sbjct: 206 HRSRSPFRNGNKRKGFPTHRNK-QRSRSVSPVQSGQASQ-VMKRRVP 250
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 207 PGSKRSALSASDAECFRCAWAPGLCGGPDVPAH 305
P +R L +D RC GL GP+ PAH
Sbjct: 574 PLRERHELRKNDCRRCRCCRFEGLPRGPEDPAH 606
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 25.8 bits (54), Expect = 8.7
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVW 157
RRSP+R +SR+ + R + S RR +E R RS R R + S P
Sbjct: 819 RRSPMRRRRSRDASPRRRRRSASGSDSSPHRR---SESPRDRRRRSPEHRRRREASPPRR 875
Query: 156 SRR 148
R+
Sbjct: 876 DRK 878
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/39 (25%), Positives = 16/39 (41%)
Frame = -2
Query: 276 GPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPV 160
GP + + PT ++ S TPRH +P +
Sbjct: 223 GPTTSRQNVSGQAGPTNMTQSSTSHSSTPRHHGEPQTTI 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,676,469
Number of Sequences: 59808
Number of extensions: 249258
Number of successful extensions: 1532
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 473307974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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