Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0826
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 32 0.12
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 31 0.16
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 31 0.16
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 0.36
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 0.36
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 0.36
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 0.36
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 30 0.36
AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen prot... 30 0.47
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.63
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.63
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.63
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 1.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 1.4
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 1.4
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 1.4
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 1.9
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 28 1.9
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 28 1.9
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 27 2.5
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 27 2.5
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 27 2.5
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 27 2.5
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 27 2.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 27 3.3
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 27 3.3
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 27 3.3
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 27 3.3
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 27 3.3
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 4.4
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 4.4
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 4.4
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 27 4.4
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 27 4.4
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 4.4
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 4.4
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 4.4
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 27 4.4
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 26 5.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 26 5.8
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 26 5.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 26 5.8
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 26 5.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 26 5.8
AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical ... 26 5.8
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 26 7.7
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical... 26 7.7
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 26 7.7
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 26 7.7
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 26 7.7
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 26 7.7
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 26 7.7
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 26 7.7
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 26 7.7
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 337 PPVTPPGGAEP*-AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
PP P G EP AG GP PG + + + PG +R PSP
Sbjct: 160 PPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSP 212
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEAD 230
P PPG G++ G SGP +PGA A + + SEAD
Sbjct: 121 PPGPPGTDGSDGKDGLSGPDGQPGADADPEATPSEAD 157
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -2
Query: 333 RSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSR 166
RSP+R +S + R P PR +R P P + + RS++P RN R
Sbjct: 125 RSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRR-DQSRSKSPPRRNYRQR 179
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 325 PPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPG 206
PPG A P G GPP PGA + +A +E L+PG
Sbjct: 184 PPGEAGP-KGPPGPPGSPGAPGEPGRPGDDAP-SEPLIPG 221
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P PPG GA AGT+G P PG A + + PGA
Sbjct: 157 PAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGA 202
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGA 266
PP PP G+ P AG+ PP P A
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAA 261
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGA 266
PP PP G+ P AG+ PP P A
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAA 282
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGA 266
PP PP G+ P AG+ PP P A
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAA 267
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.3 bits (65), Expect = 0.36
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQ 257
P PGG P G SGPP RPGA Q
Sbjct: 199 PGALLPGGDAP-PGPSGPPGRPGAPGQ 224
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 30.3 bits (65), Expect = 0.36
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = -1
Query: 337 PPVTP----PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE*TF 170
PP P P GA AG G +PG+Q S+ E+ PG L P T
Sbjct: 215 PPCPPCPAGPKGAPGQAGYPGADGQPGSQGDNGEKGSDGAAGEKGRPGPLGKIGEPGATG 274
Query: 169 STCLVSTESTPFP 131
T + S P P
Sbjct: 275 ETGENAENSEPTP 287
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
PVTPP AG G P + G S+ D E+ GA + P
Sbjct: 211 PVTPPPCPPCPAGPKGAPGQAGYPGADGQPGSQGDNGEKGSDGAAGEKGRP 261
>AF040660-2|AAC71147.1| 302|Caenorhabditis elegans Collagen protein
88 protein.
Length = 302
Score = 29.9 bits (64), Expect = 0.47
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 331 VTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
+T P GA G GP PGA Q + + PGA DA +P
Sbjct: 137 ITCPAGAPGPQGPDGPAGAPGADGQAGSPGAPGQDGQPGGPGAQGDAGAP 186
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPG 269
PP PPGG P G PP PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP 272
PP PPGG P +G PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPG 269
PP PPGG P G PP PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG 749
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP 272
PP PPGG P +G PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPG 269
PP PPGG P G PP PG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPG 332
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP 272
PP PPGG P +G PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPP 347
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 29.1 bits (62), Expect = 0.83
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 330 SPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 151
SP R ++R +D+ RH + P+P S RE S + R+R P R +R
Sbjct: 131 SPPRPSRNRHDSDKDNSPPRRRRHDSDNSPPRP---SRKIREESPSARNRRSPPR---TR 184
Query: 150 RSPH 139
R H
Sbjct: 185 RDRH 188
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTP--PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P+TP PG A P AG GPP PG + + PGA
Sbjct: 212 PITPGAPGPAGP-AGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGA 256
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTP--PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P+TP PG A P AG GPP PG + + PGA
Sbjct: 212 PITPGAPGPAGP-AGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGA 256
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
P PPG P AG G P PGA S SE + R
Sbjct: 100 PPGPPGPPGP-AGMDGKPGEPGASGPHGMSGSELTKMMR 137
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTP--PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P+TP PG A P AG GPP PG + + PGA
Sbjct: 212 PITPGAPGPAGP-AGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGA 256
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTP--PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P+TP PG A P AG GPP PG + + PGA
Sbjct: 212 PITPGAPGPAGP-AGPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGA 256
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRP 272
P T PG A P G G PQRP
Sbjct: 291 PRTTPGSAGPGTGPPGTPQRP 311
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRP 272
P T PG A P G G PQRP
Sbjct: 289 PRTTPGSAGPGTGPPGTPQRP 309
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 301 AGTSGPPQRPGAQAQRKHSASEADR 227
AG GPP +PGAQ + H A EA +
Sbjct: 88 AGPPGPPGQPGAQGEAGH-AGEAGK 111
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 301 AGTSGPPQRPGAQAQRKHSASEADR 227
AG GPP +PGAQ + H A EA +
Sbjct: 88 AGPPGPPGQPGAQGEAGH-AGEAGK 111
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 308 AVSRDIRTTTEARRPGTA--ETLGVRSRQS*ALAAGSAQRRPVTG 180
+ S + T++ ARRP TA +TL + + A AA +A P G
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAAAAAAATAGGTPAAG 216
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 308 AVSRDIRTTTEARRPGTA--ETLGVRSRQS*ALAAGSAQRRPVTG 180
+ S + T++ ARRP TA +TL + + A AA +A P G
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAAAAAAATAGGTPAAG 216
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 312 QSREQGHQDHHRGPAPRH-SGNTRRPKPTELSACCRERSETPRHRNKPSRP 163
Q+ H HH PAPRH S + + + S+ R +S +P N+ RP
Sbjct: 31 QNGNSHHHHHHLPPAPRHLSSSHHQIETISGSSKLRAQSGSPA-LNRKKRP 80
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKH 248
P+TP GA AG +GP +PGA Q H
Sbjct: 212 PITP--GAPGPAGPAGPQGQPGAPGQPGH 238
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPG 269
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Frame = -1
Query: 337 PPVTPPGGAEP*------AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDA 191
PP TP +P AG GPP PG +R + ++ D PG DA
Sbjct: 188 PPGTPGRPGQPGRKAIGEAGPKGPPGAPGTDGRRGENGTDGDDGVDGQPGDEGDA 242
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 153 ETKQVEKVYSGDGASLSAPGSKRSALSASDAECFRCAWAPGL 278
E + V DG+SL + SKR+ L+ +D + +R P L
Sbjct: 220 EASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLCLPNL 261
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPG 269
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPG 269
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPG 269
PP P PGG AG +GPP PG
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPG 168
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 301 AGTSGPPQRPGAQAQRKH 248
AG GPP +PGAQ ++ H
Sbjct: 104 AGPPGPPGQPGAQGEQGH 121
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
P P G P G GPP RPG+ Q A+ A R
Sbjct: 148 PCKPCPGGRP--GPPGPPGRPGSDGQPGRPATGGGAAPR 184
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 249 CFRC-AWAPGLCGGPDVPAHGSAPPGG 326
CF C A PG GGP P PPGG
Sbjct: 136 CFDCPAGPPGAVGGPG-PKGPPGPPGG 161
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 249 CFRC-AWAPGLCGGPDVPAHGSAPPGG 326
CF C A PG GGP P PPGG
Sbjct: 136 CFDCPAGPPGAVGGPG-PKGPPGPPGG 161
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 325 PPGGAEP*AGTSGPPQRPG 269
PPG A P AG +GPP PG
Sbjct: 170 PPGPAGP-AGNAGPPGAPG 187
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQ 257
P TP GGA G GPP PG Q
Sbjct: 192 PGNTPSGGAAGPPGPPGPPGGPGNDGQ 218
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 318 AVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPRHRN 178
A Q++EQ HQ HH+ P+ R + + C +R + H N
Sbjct: 326 ARQAQEQHHQQHHQPDQPQQQPQ-RSQEGSLPKMSCSQRDDKSCHAN 371
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
P P G A P AG GP RPG H + + GA A P
Sbjct: 153 PAGPAGSAGP-AGPKGPDGRPGQPGSAGHPGAPGQPGSKGNNGAPGAAGGP 202
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -1
Query: 337 PPVTP--PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSP 182
PP P PG P G G P PG Q + ++ + PG +R P+P
Sbjct: 157 PPGQPGAPGEQGP-NGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAP 209
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP-GAQAQRKHSASEADRAERLLPGAL 200
PPVTPP P PP P + + SAS A+ L AL
Sbjct: 592 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKNDLEAAL 638
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP-GAQAQRKHSASEADRAERLLPGAL 200
PPVTPP P PP P + + SAS A+ L AL
Sbjct: 609 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKNDLEAAL 655
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRP-GAQAQRKHSASEADRAERLLPGAL 200
PPVTPP P PP P + + SAS A+ L AL
Sbjct: 721 PPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPMAPAKNDLEAAL 767
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 765 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 812
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 368 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 415
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 728 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 775
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 240 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 287
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 765 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 812
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 368 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 415
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 728 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 775
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE 179
P PPG GA G G P +PG Q AS A +P AP P+
Sbjct: 91 PAGPPGPPGAPGDQGLDGAPGQPGNVGQNAVVASIAASTSECIP-CPAGAPGPQ 143
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 322 PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE 179
P G E AG +G P PGA R+ PGA AP P+
Sbjct: 168 PAGPEGPAGDAGAPGAPGAPGNDGQPGQNGQRSTG-TPGA-AGAPGPQ 213
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 240 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 287
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 368 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 415
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
PP + G G GPP PGA + S E R + PG D
Sbjct: 707 PPGSGTGHGSGADGPQGPPGLPGAPGRDGTSGVEGQRGPQGPPGPKGD 754
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETP 190
R PLR S Q H H R P HS +PKP R R+E+P
Sbjct: 306 RLPPLRPPPSSLQHHHHHRRSPPLFHS-PVYKPKP-------RSRTESP 346
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQR 254
P P G + P AG +GP +PG QR
Sbjct: 167 PAGPAGSSGP-AGPAGPSGQPGTPGQR 192
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQR 254
P P G + P AG +GP +PG QR
Sbjct: 151 PAGPAGSSGP-AGPAGPSGQPGTPGQR 176
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = -1
Query: 334 PVTPPG-----GAEP*AGTSGPPQRPGAQAQR 254
P PPG G++ GT+GPP PG + ++
Sbjct: 263 PKGPPGPAGQPGSDGNPGTAGPPGNPGGEGEK 294
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 337 PPVTPPGGAEP*AGTSGPPQRPG 269
PP PG P GPPQ PG
Sbjct: 450 PPGAYPGNGAPGGPPGGPPQFPG 472
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -1
Query: 337 PPVTPPGGAEP*A--GTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P PPG P G GPP PG + + R +PGA
Sbjct: 201 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGA 247
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -1
Query: 337 PPVTPPGGAEP*A--GTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P PPG P G GPP PG + + R +PGA
Sbjct: 182 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGA 228
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -1
Query: 337 PPVTP-PGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRDAPSPE 179
PP P P G+E G SG P PG S S + P +P P+
Sbjct: 99 PPGPPGPPGSEGHPGDSGVPGNPGQPGTAGISESHSSSGCITCPAGPMGSPGPD 152
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PVTPPG--GAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGA 203
P PG G AGT GP PG Q HS ++ PGA
Sbjct: 215 PAGAPGQPGRSGGAGTPGPQGPPGPSGQPGHSGNDGVPGTPGNPGA 260
>AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical
protein Y108G3AL.3 protein.
Length = 685
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -2
Query: 312 QSREQGHQDHHRGP--APRHSGNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRS 145
+ ++ H +G ++ TR P R++TP +NK RP R S
Sbjct: 473 EEKKSSHPSSRKGSKATDENAPATRPPSRKAAGGSHEPRAKTPNQKNKDERPTTRRSS 530
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPR-HRNKPSRPV 160
R P+ V+S+ + R P+P + RP LS+ +ER + + + P P
Sbjct: 820 RPQPVITVRSQSPSPMSY-RSPSPAPKESAIRPSRLPLSSAAKERDKLRKTATDAPPPPA 878
Query: 159 WSRRS 145
S RS
Sbjct: 879 RSARS 883
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 60 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 209
+R++ +T L+Q + S+ +YYN N +V S DG SL P
Sbjct: 218 IRIAFITCLVQACGTALSVIRYYNMNTSMAVTLANFIPFIS-DGLSLVQP 266
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 336 RRSPLRAVQSREQGHQDHHRGPAPRHSGNTRRPKPTELSACCRERSETPR-HRNKPSRPV 160
R P+ V+S+ + R P+P + RP LS+ +ER + + + P P
Sbjct: 820 RPQPVITVRSQSPSPMSY-RSPSPAPKESAIRPSRLPLSSAAKERDKLRKTATDAPPPPA 878
Query: 159 WSRRS 145
S RS
Sbjct: 879 RSARS 883
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
PV PPG G GPP PG + Q+ R +R
Sbjct: 274 PVGPPGML----GLDGPPGYPGLKGQKGDLGDAGQRGKR 308
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAER 218
PV PPG G GPP PG + Q+ R +R
Sbjct: 274 PVGPPGML----GLDGPPGYPGLKGQKGDLGDAGQRGKR 308
>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform c
protein.
Length = 1310
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 147 SVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFRCAWAPGL 278
S+ ++ E G +S+ +PGS S D R + APG+
Sbjct: 1184 SIHSEDTESTDYGASSSMYSPGSSNRISSQVDPPIGRLSSAPGI 1227
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 147 SVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFRCAWAPGL 278
S+ ++ E G +S+ +PGS S D R + APG+
Sbjct: 2330 SIHSEDTESTDYGASSSMYSPGSSNRISSQVDPPIGRLSSAPGI 2373
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPG 269
P PPG P +G GPP PG
Sbjct: 159 PTGPPGETGP-SGPEGPPGNPG 179
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 216 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 121
CC S P+ + SRP + HFHC I
Sbjct: 97 CCPITS-LPKRLDSCSRPFCKLKKKAHFHCKI 127
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 25.8 bits (54), Expect = 7.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 313 AEP*AGTSGPPQRPGAQ--AQRKHSASEA--DRAERLLPGALRDAPSPE*TFSTCLVSTE 146
A+ AG+ P P ++ A SA+EA D A + P A AP+P +T + E
Sbjct: 464 AQSAAGSYDVPSEPASEVTAPIVESATEAPSDSAAPIGPAASEPAPAPIEAPATDAATLE 523
Query: 145 STPFP 131
+ P P
Sbjct: 524 TAPAP 528
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 60 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPG 212
++LS+ L QQ+ S+ + Y ++ V KQ+ ++ GA PG
Sbjct: 419 IKLSEQLYLDQQIKLICSLCQLYPVKMINKVAIKQLLELVVFAGADFEMPG 469
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 96 IVVLTSSSWRDVIKP 52
I+ TS++W+DVIKP
Sbjct: 15 IIPTTSATWKDVIKP 29
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 334 PVTPPGGAEP*AGTSGPPQRPGAQAQRKHSASEADRAERLLPGALRD 194
P+TPP G +GPP PG S PGA D
Sbjct: 144 PITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGD 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,260,005
Number of Sequences: 27780
Number of extensions: 178201
Number of successful extensions: 1197
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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