Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0823
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   1.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.9  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 240  HYCFTAEIGRAVVPTRADSEEVLPS 166
            H  F AEIG ++V    DS E+LP+
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLPA 963


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 328 EPIYDVNAPPTLRYKFSIVTTAASSSNRNALLLHGRNRQGGGTYPCG 188
           +P      PPT     S+ ++++SSS+ ++  L G N  GGG    G
Sbjct: 781 KPSVTSTTPPT---PASLSSSSSSSSSASSTSLCGGNGGGGGAGASG 824


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 123  MNIAAINKVKCASLLMVGPLLSPHG*VPPPCLFLP 227
            +N+  + + K     M+     PH    PPC ++P
Sbjct: 1724 LNLYRLGRRKRLGDCMIAAKFEPHDNWLPPCYYVP 1758


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,243
Number of Sequences: 2352
Number of extensions: 12803
Number of successful extensions: 65
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)