Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0821
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   6.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 377 GYGHFQSFQSQ*RTVVCYK 321
           G+G FQ  Q   +T +C+K
Sbjct: 288 GFGDFQPSQVHKQTAICFK 306


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 176 FISNIIGGF*AFFNENTRNLLSTMKTNS 93
           F  NI+  F   FNE T+ L+  ++  S
Sbjct: 134 FHFNILQEFIQIFNEETKRLVEDLEAES 161


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 91  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 198
           D+L+ I +    ++ LKK   P +  E  T EP+ +
Sbjct: 255 DKLLQISEKVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 91  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 198
           D+L+ I +    ++ LKK   P +  E  T EP+ +
Sbjct: 255 DKLLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 91  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 198
           DE + I +    ++ LKK   P +  E  T EP+ +
Sbjct: 257 DEFLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 292


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 416 CVIQIYVICGHDIGYGHFQSFQSQ 345
           CV+  Y+     +  GH+++F SQ
Sbjct: 196 CVVNQYIKQVCKLNNGHYKNFLSQ 219


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 46  TFIITFHLGS 17
           T +ITFH+GS
Sbjct: 375 TLLITFHIGS 384


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 416 CVIQIYVICGHDIGYGHFQSFQSQ 345
           CV+  Y+     +  GH+++F SQ
Sbjct: 21  CVVNQYIKQVCKLNNGHYKNFLSQ 44


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 352 NRNDGQWSATNMSL*SFAKPVYDAAYVSKSKV 257
           N  D   SAT++ L +F  P Y       SK+
Sbjct: 19  NSGDSTSSATSIDLSTFRVPTYGTTSHPTSKL 50


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 352 NRNDGQWSATNMSL*SFAKPVYDAAYVSKSKV 257
           N  D   SAT++ L +F  P Y       SK+
Sbjct: 19  NSGDSTSSATSIDLSTFRVPTYGTTSHPTSKL 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,536
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)