Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0821
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 4.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.3
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 5.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 6.9
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 21 9.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.2
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 9.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.2
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 297 NQYMTQRMFPNPRWVFNDVAFRLIVFIIFWGNIN 196
N+YM +++ ND F + F I N+N
Sbjct: 542 NEYMMALSMKLQKFINNDYNFNEVNFRILGANVN 575
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 77 FTTLLVFFNKYLYHYVSSWQRHFSC 3
F L V N+ +V W+ HF C
Sbjct: 412 FLNLTVENNRRNPWFVEFWEHHFQC 436
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 345 LRLEALKMAISYVMTTYNVNL 407
LRL+A + ++Y TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 345 LRLEALKMAISYVMTTYNVNL 407
LRL+A + ++Y TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 211 EDNENNETECYVVENPPWIWKHT 279
E NE++ T ++ + W+HT
Sbjct: 371 EMNEDDNTSLVSLDKKQYTWRHT 393
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 132 KYAKFTVNDEN 100
+Y K+T+NDE+
Sbjct: 233 RYTKYTINDES 243
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 280 AYVSKSKVGFQRRSIPSHCFHYLLG 206
A K KVG Q IP+ LLG
Sbjct: 6 ALTKKIKVGLQAHVIPAELTAKLLG 30
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 93 NYNNNYNNYNKHNYNKLY 110
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 270 PNPRWVFNDVAF 235
P P W +NDV +
Sbjct: 105 PYPNWSYNDVKY 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 326 NYNNNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 596 NWNLVFNNFFKIQYPKLF 543
N+N +NN+ K Y KL+
Sbjct: 326 NYNNNYNNYNKHNYNKLY 343
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +1
Query: 511 IKNKKSCHKTGK-SLGYW 561
++NKKSCH K S W
Sbjct: 490 LRNKKSCHSGYKDSFAGW 507
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +1
Query: 511 IKNKKSCHKTGK-SLGYW 561
++NKKSCH K S W
Sbjct: 490 LRNKKSCHSGYKDSFAGW 507
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +1
Query: 511 IKNKKSCHKTGK-SLGYW 561
++NKKSCH K S W
Sbjct: 490 LRNKKSCHSGYKDSFAGW 507
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,237
Number of Sequences: 438
Number of extensions: 4068
Number of successful extensions: 31
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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