Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0820
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.82 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 281 FYY*CSLILLLGKYLYCQ 334
           +Y+ C+LI+LL  Y +C+
Sbjct: 286 YYFYCALIILLCIYYFCR 303


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +1

Query: 280 ILLLMQSYFIAWQIFILSVTYRFLFLD 360
           ILL++Q Y++ + + ++S T+  LFL+
Sbjct: 213 ILLMIQLYYLYFDVIVIS-TFLQLFLE 238


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +1

Query: 280 ILLLMQSYFIAWQIFILSVTYRFLFLD 360
           ILL++Q Y++ + + ++S T+  LFL+
Sbjct: 139 ILLMIQLYYLYFDVIVIS-TFLQLFLE 164


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 277 FILLLMQSYFIAWQIFILSVTYRFLF 354
           F++LL  S+F+ + +   + T+R L+
Sbjct: 140 FVILLWISFFLNFMLHCNNTTWRCLY 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,235
Number of Sequences: 336
Number of extensions: 2616
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)