Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0820
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.9  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 164 LKSSQFNLFSSHQLTSLSCLFIPET 90
           LK+S F  F+SH++   S LF+ +T
Sbjct: 468 LKASPF--FASHEVVGSSLLFVHDT 490


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 164 LKSSQFNLFSSHQLTSLSCLFIPET 90
           LK+S F  F+SH++   S LF+ +T
Sbjct: 383 LKASPF--FASHEVVGSSLLFVHDT 405


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 164 LKSSQFNLFSSHQLTSLSCLFIPET 90
           LK+S F  F+SH++   S LF+ +T
Sbjct: 702 LKASPF--FASHEVVGSSLLFVHDT 724


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/32 (21%), Positives = 16/32 (50%)
 Frame = -3

Query: 263 NIMINQILTYIFKKDCFNYTDNPTIDLPCTYS 168
           +I+    L  + + +C+ Y  N  ++  C Y+
Sbjct: 308 HILQKTTLNMLTQVECYKYYGNIMVNAMCAYA 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,324
Number of Sequences: 438
Number of extensions: 3264
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)