Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0819
         (636 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R8N8 Cluster: Putative uncharacterized protein PY0718...    34   3.3  
UniRef50_Q23PU3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_UPI00006CE969 Cluster: hypothetical protein TTHERM_0056...    33   7.6  
UniRef50_A0UV68 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_Q7R8N8 Cluster: Putative uncharacterized protein PY07183;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07183 - Plasmodium yoelii
           yoelii
          Length = 1011

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +3

Query: 201 GKRVSMLNMQRSLYTSKYNVEASATTHFLESKHKRIYDKLAKAANEQLQVNDKRTNKGXS 380
           GK  S+ N    +   + NV     +  ++ K   IY+++AK  N++  VNDKRT+    
Sbjct: 245 GKGASIYNEIAKVDNKRANVSNKRAS--IDGKGASIYNEIAKVDNKRADVNDKRTDVNDK 302

Query: 381 RG-LNAKNA 404
           +  +N K A
Sbjct: 303 KADVNDKKA 311


>UniRef50_Q23PU3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 819

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +3

Query: 189 LQSVGKRVSMLNMQRSLYTSKYNVEASATTHFLESKHKRIYDKLAKAANEQLQVNDKRTN 368
           LQ   + +S LN   +LYT     + S   ++LES    IYD   K+ +++   N     
Sbjct: 718 LQDSQRSISQLNGSYNLYTETLRGDRSNKGNYLESSQNSIYDCHIKSRDDKQGFNSSNKF 777

Query: 369 KGXSRGLNAKN 401
              SR +  +N
Sbjct: 778 DHSSRTIQIEN 788


>UniRef50_UPI00006CE969 Cluster: hypothetical protein
           TTHERM_00561760; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00561760 - Tetrahymena
           thermophila SB210
          Length = 368

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
 Frame = +1

Query: 160 DVEFGAYNGLYRVLENAF-QCL--TCNE-VYTPVNTMLKQVQQRIS*SLNIKGFMTN*RK 327
           D+++G  N  YR L++ F  C   T N+ +Y  +NT+LK++ Q  + +L I   +TN   
Sbjct: 80  DIKYGRGNLTYRFLKSEFGSCSHETINQKIYEGMNTILKELNQYNAFNLVIGSLVTNTFY 139

Query: 328 LQTNSYKLTTNVRIK 372
              N Y    N+  K
Sbjct: 140 YICNPYNQKLNITPK 154


>UniRef50_A0UV68 Cluster: Putative uncharacterized protein; n=1;
           Clostridium cellulolyticum H10|Rep: Putative
           uncharacterized protein - Clostridium cellulolyticum H10
          Length = 278

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 270 HLLQHCIYWCINFVAC*ALKRVFQHSVESVVSTKLHIYLYQLKKMFLASYVT 115
           ++LQHC +  I F +   LK  F+H     VST L+ +++     F++  +T
Sbjct: 99  YVLQHCYFSTIRFKSL--LKWFFRHFTVLSVSTILYFFIFNFSLYFISGLIT 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,734,796
Number of Sequences: 1657284
Number of extensions: 8756116
Number of successful extensions: 19465
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19462
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)