Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0819
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.       30   6.0  
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym...    30   6.0  
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.        30   6.0  
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos...    30   6.0  

>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
          Length = 1725

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 404  FKPPACHLIRXLQMKMTTDRPESXCCPSRNSSIDFLL 514
            F+P A  L   L++ M +  PE+ C  SR + +D  L
Sbjct: 1465 FQPSAASLTANLRLPMASALPEALCSQSRTTPVDLCL 1501


>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polymerase
            family, member 4 protein.
          Length = 1724

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 404  FKPPACHLIRXLQMKMTTDRPESXCCPSRNSSIDFLL 514
            F+P A  L   L++ M +  PE+ C  SR + +D  L
Sbjct: 1464 FQPSAASLTANLRLPMASALPEALCSQSRTTPVDLCL 1500


>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
          Length = 1724

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 404  FKPPACHLIRXLQMKMTTDRPESXCCPSRNSSIDFLL 514
            F+P A  L   L++ M +  PE+ C  SR + +D  L
Sbjct: 1464 FQPSAASLTANLRLPMASALPEALCSQSRTTPVDLCL 1500


>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
            transferase protein.
          Length = 1724

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 404  FKPPACHLIRXLQMKMTTDRPESXCCPSRNSSIDFLL 514
            F+P A  L   L++ M +  PE+ C  SR + +D  L
Sbjct: 1464 FQPSAASLTANLRLPMASALPEALCSQSRTTPVDLCL 1500


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,890,524
Number of Sequences: 237096
Number of extensions: 1365413
Number of successful extensions: 2510
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2510
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)