Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0816
         (501 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0511 + 25056018-25059107                                         30   1.2  
01_01_0115 - 856957-858055,858479-858538,858802-859583                 28   3.7  

>03_05_0511 + 25056018-25059107
          Length = 1029

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +2

Query: 239 FEVHREGKFFNKKLPLTTSYERLVLAMYPVYFCREAVMRFGLKGEAARCXYTETLELISX 418
           F +H+  +F+  KLP   +   L     P YF ++  M  G KG          +E +  
Sbjct: 226 FRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKKMIVGKKGMEGGDAQPMFVEFVLK 285

Query: 419 GVWRIYRCXMS 451
            +W+ Y+  +S
Sbjct: 286 PLWQAYQGVLS 296


>01_01_0115 - 856957-858055,858479-858538,858802-859583
          Length = 646

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 256 FAMNFEYVSKFYIYTTLIYK*LLFCFSEKVH*P 158
           FA+ F Y S+FY+Y++ I +    C ++  H P
Sbjct: 235 FAIRFPYTSRFYVYSSKIKQ----CIAQSFHCP 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,709,801
Number of Sequences: 37544
Number of extensions: 183967
Number of successful extensions: 282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)