Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0816
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105099-1|AAI05100.1|  369|Homo sapiens C3orf48 protein protein.      29   6.9  
BC105097-1|AAI05098.1|  369|Homo sapiens C3orf48 protein protein.      29   6.9  
AK058178-1|BAB71705.1|  368|Homo sapiens protein ( Homo sapiens ...    29   6.9  

>BC105099-1|AAI05100.1|  369|Homo sapiens C3orf48 protein protein.
          Length = 369

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 245 VHREGKFFNKKLPLTTSYERLVLAMYPV----YFCREAVMRFGLKGEAARCXYTETLELI 412
           +H+  KF +    +TT  ++++ + Y V    Y   E +     K EA RC Y +T +  
Sbjct: 228 LHQLSKF-DPSYQMTTDEQQIINSFYTVFREEYAAIEDLFSAINKTEAVRCEYEDTHKAF 286

Query: 413 SXGVWRIYR 439
           +   WR+ R
Sbjct: 287 AKAFWRMDR 295


>BC105097-1|AAI05098.1|  369|Homo sapiens C3orf48 protein protein.
          Length = 369

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 245 VHREGKFFNKKLPLTTSYERLVLAMYPV----YFCREAVMRFGLKGEAARCXYTETLELI 412
           +H+  KF +    +TT  ++++ + Y V    Y   E +     K EA RC Y +T +  
Sbjct: 228 LHQLSKF-DPSYQMTTDEQQIINSFYTVFREEYAAIEDLFSAINKTEAVRCEYEDTHKAF 286

Query: 413 SXGVWRIYR 439
           +   WR+ R
Sbjct: 287 AKAFWRMDR 295


>AK058178-1|BAB71705.1|  368|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25449 fis, clone TST08763. ).
          Length = 368

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 245 VHREGKFFNKKLPLTTSYERLVLAMYPV----YFCREAVMRFGLKGEAARCXYTETLELI 412
           +H+  KF +    +TT  ++++ + Y V    Y   E +     K EA RC Y +T +  
Sbjct: 228 LHQLSKF-DPSYQMTTDEQQIINSFYTVFREEYTAIEDLFSAINKTEAVRCEYEDTHKAF 286

Query: 413 SXGVWRIYR 439
           +   WR+ R
Sbjct: 287 AKAFWRMDR 295


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,416,109
Number of Sequences: 237096
Number of extensions: 1032866
Number of successful extensions: 1331
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)