Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0812
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7235 Cluster: PREDICTED: similar to CG3626-PA;... 113 4e-24
UniRef50_Q9W4K8 Cluster: CG3626-PA; n=7; Endopterygota|Rep: CG36... 111 9e-24
UniRef50_Q8NCN5 Cluster: KIAA1990 protein; n=39; Euteleostomi|Re... 78 2e-13
UniRef50_Q9U300 Cluster: Putative uncharacterized protein; n=2; ... 70 3e-11
UniRef50_Q16N70 Cluster: Nad dehydrogenase; n=5; Endopterygota|R... 66 4e-10
UniRef50_UPI0000E4A2F1 Cluster: PREDICTED: similar to pyruvate d... 63 5e-09
UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad dehydr... 62 9e-09
UniRef50_A7S3V0 Cluster: Predicted protein; n=1; Nematostella ve... 58 2e-07
UniRef50_Q8IGS5 Cluster: RE37361p; n=8; Endopterygota|Rep: RE373... 45 0.001
UniRef50_A7RQ00 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.011
UniRef50_A1SJW0 Cluster: FAD dependent oxidoreductase; n=39; Bac... 41 0.019
UniRef50_Q98BZ1 Cluster: Sarcosine dehydrogenase; n=4; Alphaprot... 40 0.043
UniRef50_Q8BU72 Cluster: 0 day neonate lung cDNA, RIKEN full-len... 37 0.30
UniRef50_A6G3Y2 Cluster: FAD dependent oxidoreductase; n=1; Ples... 36 0.70
UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3; Bacteria|... 35 1.6
UniRef50_UPI00015B4D0C Cluster: PREDICTED: similar to ENSANGP000... 34 2.8
UniRef50_Q9UL12 Cluster: Sarcosine dehydrogenase, mitochondrial ... 34 2.8
UniRef50_Q6SFW0 Cluster: Glycine cleavage T-protein family; n=6;... 33 3.7
UniRef50_Q6SFA4 Cluster: Oxidoreductase, FAD-binding; n=3; Bacte... 33 3.7
UniRef50_Q8WWQ4 Cluster: Mucin 5; n=5; Catarrhini|Rep: Mucin 5 -... 33 3.7
UniRef50_Q2J6R9 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_Q92YQ6 Cluster: Putative; n=14; Alphaproteobacteria|Rep... 33 6.5
UniRef50_A1SNF1 Cluster: FAD dependent oxidoreductase; n=4; Bact... 33 6.5
UniRef50_Q0U928 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q98K38 Cluster: Dimethylglycine dehydrogenase; n=12; Al... 32 8.6
UniRef50_Q53887 Cluster: P123; n=9; Spiroplasma citri|Rep: P123 ... 32 8.6
UniRef50_A3YBF3 Cluster: Rhs family protein; n=2; Marinomonas sp... 32 8.6
>UniRef50_UPI0000DB7235 Cluster: PREDICTED: similar to CG3626-PA;
n=2; Apis mellifera|Rep: PREDICTED: similar to CG3626-PA
- Apis mellifera
Length = 660
Score = 113 bits (271), Expect = 4e-24
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +2
Query: 2 GIRXQYVQXXXXXXXXXXXXWSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRD 181
G++ +YVQ W WG EPI+R+G YCG TTTT YGFTFKKQVCLGFV+ D
Sbjct: 542 GVKRKYVQLLLNDHDPELDTWCWGNEPIFRNGKYCGMTTTTGYGFTFKKQVCLGFVQNFD 601
Query: 182 KDGVTQKVDNDYVLSGHYEIDIAG 253
G +Q+V N+Y+LSG YE+++AG
Sbjct: 602 SQGHSQEVTNEYILSGDYEVNVAG 625
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1
Query: 256 RYAAKVNLHSPNLPTKYPDKERDVYQATR 342
++ AK +LHSPNLPTK+PDKERD Y ATR
Sbjct: 627 KFPAKCHLHSPNLPTKFPDKERDSYHATR 655
>UniRef50_Q9W4K8 Cluster: CG3626-PA; n=7; Endopterygota|Rep: CG3626-PA
- Drosophila melanogaster (Fruit fly)
Length = 939
Score = 111 bits (268), Expect = 9e-24
Identities = 56/137 (40%), Positives = 74/137 (54%)
Frame = +2
Query: 2 GIRXQYVQXXXXXXXXXXXXWSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRD 181
G++ YVQ W WGGEPIYRDG Y G TTTT YG+TF+KQVCLGFV D
Sbjct: 797 GVKRMYVQLLLNDHDHEVDMWCWGGEPIYRDGVYVGMTTTTGYGYTFEKQVCLGFVRNFD 856
Query: 182 KDGVTQKVDNDYVLSGHYEIDIAGKGTRQK*ICTPRTYQRSIPTRNATSTRQRGNCTSPN 361
+G V N+YVLSGHYE+++AG K + ++PT+ R+ + T
Sbjct: 857 DEGRELPVTNEYVLSGHYEVEVAGVRFEAK----VNLHSPNLPTKFPDREREAYHATRDK 912
Query: 362 SSSAGITSRKTVSSRTG 412
A + S V++ G
Sbjct: 913 PDQADLLSYGGVTTVKG 929
>UniRef50_Q8NCN5 Cluster: KIAA1990 protein; n=39; Euteleostomi|Rep:
KIAA1990 protein - Homo sapiens (Human)
Length = 883
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 WSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKD-GVTQKVDNDYVLSGHYE 238
W W GEPIYR+G Y G+TT+++Y ++ ++ VCLGFV +D G Q V D++ G YE
Sbjct: 786 WPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEEQVVTADFINRGEYE 845
Query: 239 IDIAG 253
IDIAG
Sbjct: 846 IDIAG 850
>UniRef50_Q9U300 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 855
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +2
Query: 2 GIRXQYVQXXXXXXXXXXXXWSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRD 181
G+ ++VQ W GGE I +DG G TT+ +YGFT QVC+G+VE ++
Sbjct: 748 GVSKRFVQLLVDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTLGCQVCIGYVENKE 807
Query: 182 KDGVTQKVDNDYVLSGHYEIDIAGK 256
V ++V SGH+EIDIAGK
Sbjct: 808 FG-----VSPEFVSSGHFEIDIAGK 827
>UniRef50_Q16N70 Cluster: Nad dehydrogenase; n=5; Endopterygota|Rep:
Nad dehydrogenase - Aedes aegypti (Yellowfever mosquito)
Length = 853
Score = 66.5 bits (155), Expect = 4e-10
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 WSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVL--SGHY 235
W WGGEPIYR+ +CG T+ YGF +K +CLG++ R + + ++++ S Y
Sbjct: 748 WPWGGEPIYRNNEFCGTVTSAGYGFASQKLICLGYI-SRPSSNESSVITTEFIMDKSAVY 806
Query: 236 EIDIAG 253
IDIAG
Sbjct: 807 HIDIAG 812
>UniRef50_UPI0000E4A2F1 Cluster: PREDICTED: similar to pyruvate
dehydrogenase phosphatase regulatory subunit precursor;
PDPr; n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to pyruvate dehydrogenase phosphatase regulatory
subunit precursor; PDPr - Strongylocentrotus purpuratus
Length = 870
Score = 62.9 bits (146), Expect = 5e-09
Identities = 32/90 (35%), Positives = 46/90 (51%)
Frame = +2
Query: 2 GIRXQYVQXXXXXXXXXXXXWSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRD 181
GIR + Q W GGEPIYR+G Y G T++ YG + K VCLG+V D
Sbjct: 771 GIRFRLTQFTLEDHDTDYHHWPAGGEPIYRNGQYTGLVTSSGYGPSLGKIVCLGWVTNSD 830
Query: 182 KDGVTQKVDNDYVLSGHYEIDIAGKGTRQK 271
+ ++Y+ YE+D+AG+ + K
Sbjct: 831 ------PMTHEYITKASYEVDVAGQRYKAK 854
>UniRef50_UPI00015B450A Cluster: PREDICTED: similar to nad
dehydrogenase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to nad dehydrogenase - Nasonia vitripennis
Length = 909
Score = 62.1 bits (144), Expect = 9e-09
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 62 WSWGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEK---RDKDGVTQKVDNDYVL--S 226
W+WGGEP+YR+G + G T+ +GF K +CLGF+ + + V N+++ S
Sbjct: 805 WAWGGEPLYRNGEFVGTVTSAGHGFNIGKLICLGFIGHPGYYNSQDENRVVTNEFITDSS 864
Query: 227 GHYEIDIAG 253
YEIDIAG
Sbjct: 865 AVYEIDIAG 873
>UniRef50_A7S3V0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 771
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
WGGEPI R+G G T++ S+ FT VC+G+V V ++Y+ G +EID+
Sbjct: 689 WGGEPILRNGEIVGTTSSASFSFTLNAPVCMGYV-----SNAGHPVSDEYIRDGKFEIDV 743
Query: 248 AGK 256
AG+
Sbjct: 744 AGQ 746
>UniRef50_Q8IGS5 Cluster: RE37361p; n=8; Endopterygota|Rep: RE37361p -
Drosophila melanogaster (Fruit fly)
Length = 907
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
WG E +YR+G G Y +T K + +V + D + +D DY+ +G YE+DI
Sbjct: 818 WGLEGVYRNGEPVGILRRAEYAYTLGKSLGQTYVSRPDG----KIIDADYIRNGEYEVDI 873
Query: 248 AGKGTR 265
GK R
Sbjct: 874 LGKKYR 879
>UniRef50_A7RQ00 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 808
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
WGGE I +G+ G T++ Y F + VC VE KDG +++ D++ +++I
Sbjct: 736 WGGETIVHNGDVIGMVTSSVYSFAQGRPVCFALVE---KDG--EEITADFLQGKRLQMNI 790
Query: 248 AGK 256
AG+
Sbjct: 791 AGQ 793
>UniRef50_A1SJW0 Cluster: FAD dependent oxidoreductase; n=39;
Bacteria|Rep: FAD dependent oxidoreductase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 826
Score = 41.1 bits (92), Expect = 0.019
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
WGGE + RDG+ GQ T+ ++G T C+G R VT + SG +E+D+
Sbjct: 757 WGGELLLRDGDPAGQVTSAAWGETVGS--CVGLALLRADGPVTATT----LASGGFEVDV 810
Query: 248 AGK 256
AG+
Sbjct: 811 AGE 813
>UniRef50_Q98BZ1 Cluster: Sarcosine dehydrogenase; n=4;
Alphaproteobacteria|Rep: Sarcosine dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 869
Score = 39.9 bits (89), Expect = 0.043
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 71 GGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIA 250
G E I R+G G T+ YG+T K + G+V R+ +GV+ +D++ SG YE+ +A
Sbjct: 793 GRETILRNGEPVGYLTSGGYGYTLGKNIGYGYV--RNAEGVS----DDFLTSGDYELVVA 846
Query: 251 GKGT 262
+ T
Sbjct: 847 MERT 850
>UniRef50_Q8BU72 Cluster: 0 day neonate lung cDNA, RIKEN full-length
enriched library, clone:E030030M09 product:SARCOSINE
DEHYDROGENASE (EC 1.5.99.1) homolog; n=3; Murinae|Rep: 0
day neonate lung cDNA, RIKEN full-length enriched
library, clone:E030030M09 product:SARCOSINE
DEHYDROGENASE (EC 1.5.99.1) homolog - Mus musculus
(Mouse)
Length = 507
Score = 37.1 bits (82), Expect = 0.30
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
+G E I+R+G G +GFT K + G++ RD G V D+V +G Y ++
Sbjct: 426 FGLEAIWRNGQVVGHVRRADFGFTVNKTIAYGYI--RDPSG--GPVSLDFVKNGEYALER 481
Query: 248 AG 253
G
Sbjct: 482 MG 483
>UniRef50_A6G3Y2 Cluster: FAD dependent oxidoreductase; n=1;
Plesiocystis pacifica SIR-1|Rep: FAD dependent
oxidoreductase - Plesiocystis pacifica SIR-1
Length = 836
Score = 35.9 bits (79), Expect = 0.70
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 77 EPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIAGK 256
E +YRDG G SYG T V L +E D VD DYV G +E+ I +
Sbjct: 760 ELVYRDGACVGYIRAASYGHTLGGAVGLAMIESGD----GSPVDADYVAGGTWEVLIGNE 815
>UniRef50_Q4FLB1 Cluster: Sarcosine dehydrogenase; n=3;
Bacteria|Rep: Sarcosine dehydrogenase - Pelagibacter
ubique
Length = 814
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 77 EPIYRDGNYCGQTTTTSYGFTFKKQVCLGFV 169
EPIY + G+TT+ +Y F +KK + G+V
Sbjct: 744 EPIYLEDKIIGRTTSGNYSFNYKKNLSFGYV 774
>UniRef50_UPI00015B4D0C Cluster: PREDICTED: similar to
ENSANGP00000011212; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011212 - Nasonia
vitripennis
Length = 939
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
WG E +YR+ G Y TF + +++ + +T+ +++ +G YE++I
Sbjct: 855 WGLETVYRNREIVGYLRRAEYAHTFGYSIGQSYIKHPKHEIITK----EFLETGKYEVEI 910
Query: 248 AGK 256
GK
Sbjct: 911 LGK 913
>UniRef50_Q9UL12 Cluster: Sarcosine dehydrogenase, mitochondrial
precursor; n=49; Eumetazoa|Rep: Sarcosine dehydrogenase,
mitochondrial precursor - Homo sapiens (Human)
Length = 918
Score = 33.9 bits (74), Expect = 2.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 68 WGGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDI 247
+G E I+R+G G +GF K + G++ D G V D+V SG Y ++
Sbjct: 837 FGLEAIWRNGQVVGHVRRADFGFAIDKTIAYGYI--HDPSG--GPVSLDFVKSGDYALER 892
Query: 248 AG 253
G
Sbjct: 893 MG 894
>UniRef50_Q6SFW0 Cluster: Glycine cleavage T-protein family; n=6;
Bacteria|Rep: Glycine cleavage T-protein family -
uncultured bacterium 578
Length = 841
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 71 GGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFV 169
G E IY+DG G+ T+ YG+ K + LG V
Sbjct: 770 GSEAIYKDGEVVGRATSGGYGWRCGKSLALGLV 802
>UniRef50_Q6SFA4 Cluster: Oxidoreductase, FAD-binding; n=3;
Bacteria|Rep: Oxidoreductase, FAD-binding - uncultured
bacterium 581
Length = 805
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 71 GGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFV 169
GGEPI+ D G TT+ YG+ +K + G+V
Sbjct: 734 GGEPIFIDDACIGVTTSGGYGYAVEKSLGFGYV 766
>UniRef50_Q8WWQ4 Cluster: Mucin 5; n=5; Catarrhini|Rep: Mucin 5 -
Homo sapiens (Human)
Length = 1349
Score = 33.5 bits (73), Expect = 3.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 284 PRTYQRSIPTRNATSTRQRGNCTSPNSSSAGITSRKTVSSRT 409
P T S PT + TST Q ++P SS+ + T+S+RT
Sbjct: 362 PTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSSTISART 403
>UniRef50_Q2J6R9 Cluster: Putative uncharacterized protein; n=2;
Frankia|Rep: Putative uncharacterized protein - Frankia
sp. (strain CcI3)
Length = 613
Score = 33.1 bits (72), Expect = 4.9
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +3
Query: 123 PVTDSHSRNRYALVSSRNAIRTVLRRKLTTITF*AAIMRST*PGKVRGKSKSALPELTNE 302
P+ +H R R + ++ +RT R L + + T + GKS S P ++
Sbjct: 40 PIPSAHRRPRSGRIHTQRRVRTGARIGLIAVFVVGLLQAVTPLARAAGKSPSPTPAVSPS 99
Query: 303 VSRQGTRRLPGNEETARAPTVPRPAL 380
+ G+ R G+ + RA VP L
Sbjct: 100 AT-SGSSRAGGDAGSGRAQGVPLTTL 124
>UniRef50_Q92YQ6 Cluster: Putative; n=14; Alphaproteobacteria|Rep:
Putative - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 806
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 71 GGEPIY-RDGNYCGQTTTTSYGFTFKKQVCLGFVE 172
GGEPI+ RDG GQ ++ +YG+T + L +++
Sbjct: 734 GGEPIFLRDGTPIGQVSSGAYGYTVGMSLALCYIK 768
>UniRef50_A1SNF1 Cluster: FAD dependent oxidoreductase; n=4;
Bacteria|Rep: FAD dependent oxidoreductase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 827
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 77 EPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKDGVTQKVDNDYVLSGHYEIDIAG 253
E ++RDG G SYG+T V L V G V D++ G +E+D+AG
Sbjct: 752 EVVHRDGVPVGYVRAASYGWTLGGAVGLAMV-----SGQGAPVTPDWLSGGTWEVDVAG 805
>UniRef50_Q0U928 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 32.7 bits (71), Expect = 6.5
Identities = 26/100 (26%), Positives = 42/100 (42%)
Frame = +3
Query: 42 TTTSWTFGRGAGSRYIETGTIVVRQPPPVTDSHSRNRYALVSSRNAIRTVLRRKLTTITF 221
T+T G+GAGS Y+ + + QP P + S R A + +A + K T
Sbjct: 218 TSTPGYVGQGAGSEYLPIPSHINAQPRPTSAPPSAPRPAAPQTPSAKLDAIASKFRTEFV 277
Query: 222 *AAIMRST*PGKVRGKSKSALPELTNEVSRQGTRRLPGNE 341
AI P + + K + +L+ + Q +L G E
Sbjct: 278 PVAIQYMNNPPQEKAKREFEYKKLSESILTQIIFKLDGVE 317
>UniRef50_Q98K38 Cluster: Dimethylglycine dehydrogenase; n=12;
Alphaproteobacteria|Rep: Dimethylglycine dehydrogenase -
Rhizobium loti (Mesorhizobium loti)
Length = 808
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 71 GGEPIYRDGNYCGQTTTTSYGFTFKKQVCLGFVEKRDKD 187
G EPI+ DG G T+ Y KK V +G+V K D
Sbjct: 737 GDEPIWFDGAVRGWVTSGGYAHHSKKSVAVGYVPKEIAD 775
>UniRef50_Q53887 Cluster: P123; n=9; Spiroplasma citri|Rep: P123 -
Spiroplasma citri
Length = 1067
Score = 32.3 bits (70), Expect = 8.6
Identities = 26/87 (29%), Positives = 38/87 (43%)
Frame = +2
Query: 167 VEKRDKDGVTQKVDNDYVLSGHYEIDIAGKGTRQK*ICTPRTYQRSIPTRNATSTRQRGN 346
++ R D Q +D S + I+I+ G Q C P + IP RN N
Sbjct: 852 IDLRQIDPTIQSIDK--FKSAYKTIEISNLGNLQV-ECGPPNIENFIPNRNVDILGGL-N 907
Query: 347 CTSPNSSSAGITSRKTVSSRTGMLNFD 427
C S A IT +++ S+T +NFD
Sbjct: 908 CNINLGSLANITLQESGRSQTDKVNFD 934
>UniRef50_A3YBF3 Cluster: Rhs family protein; n=2; Marinomonas sp.
MED121|Rep: Rhs family protein - Marinomonas sp. MED121
Length = 2276
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 430 LVKVQHSSSAGYSFTAGNAGRGTVGARAVSSL 335
LVK+ SSS Y+ NAG G++G+ + S+L
Sbjct: 631 LVKIYQSSSTAYAQACTNAGNGSIGSCSTSNL 662
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,445,955
Number of Sequences: 1657284
Number of extensions: 11707716
Number of successful extensions: 40170
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 38181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40131
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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