Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0810
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 69 3e-12
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 66 1e-11
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 58 4e-09
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 58 4e-09
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 36 0.018
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 34 0.071
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 34 0.071
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 34 0.071
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 31 0.50
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 31 0.50
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 29 3.5
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 29 3.5
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 8.2
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 8.2
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/63 (52%), Positives = 47/63 (74%)
Frame = +3
Query: 66 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 245
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 246 MKF 254
+ F
Sbjct: 65 LSF 67
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +3
Query: 66 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 245
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 246 MKF 254
+ F
Sbjct: 65 LAF 67
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 57 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 236
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 237 TTEMKF 254
T + F
Sbjct: 60 NTTLSF 65
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 260 GEEFEEDRADGAKVKSVCTFEGNTLKQVQK 349
G+EF+E DG VKSV FE +QK
Sbjct: 68 GQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/64 (43%), Positives = 50/64 (78%)
Frame = +3
Query: 66 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 245
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 246 MKFS 257
++F+
Sbjct: 64 LEFT 67
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 260 GEEFEEDRADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVT 433
G EF+E DG + KS T E + VQK + R F E++ + + V
Sbjct: 69 GVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVI 128
Query: 434 CTRVY 448
R Y
Sbjct: 129 SRRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 57 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 236
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 237 TTEMKFS-PAKSSKRTA 284
+K+ S ++TA
Sbjct: 62 NYTLKWKLGTASDEKTA 78
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTC 436
G +E ADG V SV + E + L Q++ G + + + + ++ V T V C
Sbjct: 70 GTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKC 129
Query: 437 TRVYK 451
TRVY+
Sbjct: 130 TRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 57 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 236
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 237 TTEMKFS-PAKSSKRTA 284
+K+ S ++TA
Sbjct: 77 NYTLKWKLGTASDEKTA 93
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTC 436
G +E ADG V SV + E + L Q++ G + + + + ++ V T V C
Sbjct: 85 GTASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKC 144
Query: 437 TRVYK 451
TRVY+
Sbjct: 145 TRVYE 149
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 54 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSS 227
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +YN+ +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 228 TFKTT 242
+ K T
Sbjct: 61 SKKNT 65
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 34.3 bits (75), Expect = 0.071
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +3
Query: 96 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFSPAKSSK 275
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 276 R 278
+
Sbjct: 62 Q 62
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 34.3 bits (75), Expect = 0.071
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +3
Query: 96 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFSPAKSSK 275
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 276 R 278
+
Sbjct: 62 Q 62
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 34.3 bits (75), Expect = 0.071
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +3
Query: 96 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFSPAKSSK 275
SSE ++ + IGV L RK +A P DG+ V +ST K E K P K K
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKPPKPPK 61
Query: 276 R 278
+
Sbjct: 62 Q 62
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 57 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 230
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 231 FKTT 242
K T
Sbjct: 67 KKNT 70
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 57 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 230
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 231 FKTT 242
K T
Sbjct: 82 KKNT 85
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 195 DGDEYNLVTSSTFKTTEMKFSPAKSSKRTALTVLR*NPYAHSKATPSSKSRRPPTVLKSL 374
+GD + V+SST + S AK + ++ + +P + +T S + R S+
Sbjct: 484 EGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASGPTARRQNSTSSV 543
Query: 375 TSGNSA 392
TS SA
Sbjct: 544 TSTTSA 549
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 84 YKMTSSENFDEFMKTIGVGLITRKAANAVT 173
+ + SENFDE++ G G TRK T
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 84 YKMTSSENFDEFMKTIGVGLITRKAANAVT 173
+ + SENFDE++ G G TRK T
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 250 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 110
F S++ K VT S +L SST + +A+ I PT +F NSS
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 129 IGVGLITRKAANAVTPTVELRKDGDEYNL 215
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,763
Number of Sequences: 27780
Number of extensions: 243911
Number of successful extensions: 795
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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