Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0800
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-P...    49   6e-06
AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-P...    44   1e-04
AY089326-1|AAL90064.1|  457|Drosophila melanogaster AT13663p pro...    32   0.51 
AE014298-708|AAF46009.2|  581|Drosophila melanogaster CG5062-PA ...    32   0.51 
BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p pro...    29   4.8  
AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA ...    29   4.8  

>AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-PA,
           isoform A protein.
          Length = 60

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +2

Query: 128 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRD 253
           MTRGNQRDLAR KNQKKQ ++ K K       L++++RK RD
Sbjct: 1   MTRGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARD 39


>AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-PB,
           isoform B protein.
          Length = 118

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +2

Query: 128 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRD 253
           M  GNQRDLAR KNQKKQ ++ K K       L++++RK RD
Sbjct: 59  MVSGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARD 97


>AY089326-1|AAL90064.1|  457|Drosophila melanogaster AT13663p
           protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 113 NYLIRMTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDV 256
           N++  M   +QRD  RA    K  E Q K+  +E+  ++  E++ RDV
Sbjct: 224 NFVRMMCEQDQRDENRAYEYLKLKEQQLKQQRAEREAIAADEKRKRDV 271


>AE014298-708|AAF46009.2|  581|Drosophila melanogaster CG5062-PA
           protein.
          Length = 581

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 113 NYLIRMTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDV 256
           N++  M   +QRD  RA    K  E Q K+  +E+  ++  E++ RDV
Sbjct: 348 NFVRMMCEQDQRDENRAYEYLKLKEQQLKQQRAEREAIAADEKRKRDV 395


>BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p
           protein.
          Length = 391

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 140 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 250
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 319 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 355


>AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 140 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 250
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 307 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,362,297
Number of Sequences: 53049
Number of extensions: 300077
Number of successful extensions: 704
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)