Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0791
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16; Euk... 99 4e-20
UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY0677... 77 2e-13
UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3; Plasmod... 75 9e-13
UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14... 73 4e-12
UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),... 69 8e-11
UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n... 68 2e-10
UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11; ... 68 2e-10
UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia vil... 64 3e-09
UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3; ... 61 2e-08
UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, wh... 59 7e-08
UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 51 2e-05
UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.019
UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.019
UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Re... 40 0.033
UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida a... 40 0.033
UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 38 0.13
UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1; C... 36 0.94
UniRef50_Q55CK5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1; Bigelowi... 34 2.9
UniRef50_A0CM16 Cluster: Chromosome undetermined scaffold_21, wh... 32 8.7
UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces el... 32 8.7
>UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16;
Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo
sapiens (Human)
Length = 86
Score = 99 bits (238), Expect = 4e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M +RY IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLL 50
Score = 69.7 bits (163), Expect = 5e-11
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
G ++YFAI ENESKARV+FNLME+MLQPCGPP +KPE+
Sbjct: 45 GHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
>UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY06774;
n=4; Aconoidasida|Rep: Putative uncharacterized protein
PY06774 - Plasmodium yoelii yoelii
Length = 103
Score = 77.4 bits (182), Expect = 2e-13
Identities = 33/52 (63%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = +1
Query: 94 FKNKMG--ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGH 243
F KM +R+NIH+QLEHLQSKY G+GHADTT++EWL N HRD+ S++GH
Sbjct: 24 FTEKMSTFDRFNIHAQLEHLQSKYQGSGHADTTRWEWLTNIHRDTLASHVGH 75
>UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
vivax
Length = 88
Score = 75.4 bits (177), Expect = 9e-13
Identities = 29/44 (65%), Positives = 39/44 (88%)
Frame = +1
Query: 112 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGH 243
+R+NIH+QLEHLQSKY G+GH+DTT++EWL N HRD+ S++GH
Sbjct: 5 DRFNIHAQLEHLQSKYQGSGHSDTTRWEWLTNIHRDTLASHVGH 48
Score = 35.9 bits (79), Expect = 0.71
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 252 VSYFAIVENESKARVKFNLMERMLQPCGPPPEK 350
++YFAIVENE A++++ ++ M P P P+K
Sbjct: 52 LAYFAIVENEPIAKIRYRCLQNMSLPVVPKPKK 84
>UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 87
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +1
Query: 115 RYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLVTL 264
RY ++QLE L ++Y GTGHADTTKYEWL +QHRD+ S +GHP LL L
Sbjct: 6 RYTANTQLEQLHARYTGTGHADTTKYEWLTHQHRDTLASIVGHPPLLAYL 55
Score = 46.0 bits (104), Expect = 7e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 222 LLQLHGSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
L + G ++Y ++ + E +AR +F + E+MLQPCG PP K E+
Sbjct: 42 LASIVGHPPLLAYLSVADGECQARERFEVTEKMLQPCGKPPGKTEE 87
>UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14;
Eukaryota|Rep: Uncharacterized protein At3g23325 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 73.3 bits (172), Expect = 4e-12
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +1
Query: 112 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
+R+NI+SQLEHLQ+KY+GTGHAD +++EW +N RDS SY+GH +L
Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPML 52
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
G +SYFAI ENES R ++N M++ML PCG PPE+ ++
Sbjct: 47 GHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREDE 87
>UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),
putative; n=3; Eukaryota|Rep: Splicing factor 3B subunit
10 (SF3b10), putative - Babesia bovis
Length = 87
Score = 68.9 bits (161), Expect = 8e-11
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +1
Query: 112 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGH 243
+R+NIH+QLEHLQSKY GTGH + TK+EW +N RD+ S+ GH
Sbjct: 5 DRFNIHAQLEHLQSKYQGTGHVNNTKWEWALNIQRDTLASHAGH 48
>UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 10 - Entamoeba histolytica HM-1:IMSS
Length = 100
Score = 67.7 bits (158), Expect = 2e-10
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +1
Query: 124 IHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
+ +QLEH+Q KY+GTGH D +KYEW+ NQ RDS SY+GH L+
Sbjct: 9 LQTQLEHMQLKYVGTGHPDISKYEWICNQQRDSYASYIGHHSLM 52
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCG-PPPEK 350
G ++Y A+ EN+S R ++ +ERM PCG PPPEK
Sbjct: 47 GHHSLMAYIAVAENQSIGRTRYQFLERMCDPCGKPPPEK 85
>UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11;
Ascomycota|Rep: Uncharacterized protein C211.05 -
Schizosaccharomyces pombe (Fission yeast)
Length = 85
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M +R ++LE LQ++Y+G G+A TTKYEW++NQHRD+ S +GHP LL
Sbjct: 1 MADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLL 50
Score = 40.3 bits (90), Expect = 0.033
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPP 344
G ++Y A E + +V+ NL+E+M+ PCGPPP
Sbjct: 45 GHPPLLAYMATALGEPRVQVRKNLLEKMIMPCGPPP 80
>UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia
villosa|Rep: CG11985-like protein - Boltenia villosa
Length = 49
Score = 63.7 bits (148), Expect = 3e-09
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +3
Query: 225 LQLHGSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKP 353
LQ G +SY +I ENE+KARV+FNL+ RM QPCGPPP++P
Sbjct: 4 LQYIGHPDLLSYISIAENEAKARVRFNLLXRMFQPCGPPPDRP 46
>UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 121
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M ++ +LE LQ+K+IGTGH DTT +EW N HRD+ S GHP LL
Sbjct: 1 MADKLRNQQELERLQAKFIGTGHPDTTSWEWKTNIHRDTYSSIAGHPPLL 50
Score = 26.6 bits (56), Expect(2) = 5.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPC 332
G +SY A+ ENE A+V+ ++ R+ PC
Sbjct: 45 GHPPLLSYIALAENEPVAKVRVQMI-RVWNPC 75
Score = 25.4 bits (53), Expect(2) = 5.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 312 ERMLQPCGPPPEK 350
++MLQP GPPP +
Sbjct: 95 QKMLQPAGPPPPR 107
>UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 111
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M ++ LE Q++YIGTGHADTTK+E+L N RDS SY+GHP LL
Sbjct: 1 MADKLRTLQNLEAQQARYIGTGHADTTKHEFLNNIVRDSYASYIGHPPLL 50
>UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 88
Score = 59.3 bits (137), Expect = 7e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLV 258
M +R+N +Q EHL ++Y+GTG+ DT KY W + HRD+ S++GH +V
Sbjct: 1 MQDRFNFQTQTEHLHARYVGTGNPDTPKYVWNNHIHRDTLASHIGHHSRMV 51
Score = 42.3 bits (95), Expect = 0.008
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 258 YFAIVENESKARVKFNLMERMLQPCGPPP 344
YF ENE R+++ + +M+QPCGPPP
Sbjct: 52 YFCTAENEPMCRLRYKFLTKMIQPCGPPP 80
>UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 122
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 148 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
QS+Y+G G+ DTTK EW N RDS SY+GHP +L
Sbjct: 51 QSRYLGVGNPDTTKQEWQTNVARDSYASYIGHPGVL 86
>UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 246 GFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
GF+SY ++ + + VK NL+++M+QPCGP P P D
Sbjct: 51 GFLSYQSMGLGQPEIVVKTNLIDKMVQPCGPAPPAPVD 88
>UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 87
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGH 243
M ++ + L+ KY+G G+ TTK EWL N +RD+ S GH
Sbjct: 1 MSDKVRQQQLYQVLKQKYVGLGNEKTTKEEWLTNVNRDTYNSLQGH 46
>UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Rep:
AFR059Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 84
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M ++ + ++ K+IG G DT++ EWL HRD+ S +GH LL
Sbjct: 1 MSDKIREERLFQAMKQKHIGLGTDDTSRDEWLTQVHRDTYNSLLGHSALL 50
>UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida
albicans IPF11714 unknown function; n=2;
Saccharomycetaceae|Rep: Similar to ca|CA1331|IPF11714
Candida albicans IPF11714 unknown function -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 85
Score = 40.3 bits (90), Expect = 0.033
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
M ++ +Q L+SKYIG G+AD T+ E++ N +RD S H ++L
Sbjct: 1 MADKVKDINQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNIL 50
>UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 53
Score = 38.3 bits (85), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 237 GSSGFVSYFAIVENESKARVKFNLME 314
G + YFA+ ENE+KARV+FNL+E
Sbjct: 16 GHGNLLDYFALAENETKARVRFNLLE 41
Score = 37.9 bits (84), Expect = 0.18
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 193 EWLMNQHRDSCCSYMGHPDLL 255
EWL+NQHRDS +Y+GH +LL
Sbjct: 1 EWLVNQHRDSASAYIGHGNLL 21
>UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 85
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 115 RYNIHSQLEHLQSKYIGTGHADTTK-YEWLMNQHRDSCCSYMGH 243
R I+ QLE L SKY GTGH +T + EW N RD+ S + H
Sbjct: 6 RSTIYFQLEQLHSKYQGTGHINTKRSSEWGDNILRDTASSNIMH 49
Score = 36.3 bits (80), Expect = 0.54
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 252 VSYFAIVENESKARVKFNLMERML 323
+SYFAI EN SKAR+ F ++E M+
Sbjct: 53 ISYFAIAENTSKARISFRMLESMI 76
>UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
B0495.6 - Caenorhabditis elegans
Length = 87
Score = 35.5 bits (78), Expect = 0.94
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 109 GERYNIHSQLEHLQSKYIGT 168
GER+++ +QLEHLQSKY GT
Sbjct: 5 GERFHVLAQLEHLQSKYTGT 24
>UniRef50_Q55CK5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 930
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 356 RLNASILKIELS*FTYYLTLNPLS*HKFEQFVFISITFNKHN*SIQIVPPKLNLLSIKTT 535
RL +I ELS YY+T++ + ++ V + + I+I+PPK+N+++ T
Sbjct: 259 RLFITIPNYELSTKLYYITIDQIKQANYKSNVLFVVPNLNVSLPIEIIPPKVNIMACSPT 318
Query: 536 N 538
N
Sbjct: 319 N 319
>UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3b5 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 72
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 130 SQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLVTL 264
+QL+ L KY GTG+ T++ EW+ HRD+ + + LL L
Sbjct: 6 NQLDFLFWKYEGTGNRRTSEKEWISQIHRDNISFILENYGLLKAL 50
>UniRef50_A0CM16 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2076
Score = 32.3 bits (70), Expect = 8.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 97 KNKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQ 210
KN + ++ + ++Q+ QSKY+G H +T K +NQ
Sbjct: 187 KNSIHQQLSYYNQIHFYQSKYLGDNHKETIKTIMRINQ 224
>UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 80
Score = 32.3 bits (70), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLV 258
M ++ Q L+SKY G G++DTT E+ + D+ S H LL+
Sbjct: 1 MADKIREKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLLL 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,120,129
Number of Sequences: 1657284
Number of extensions: 9007068
Number of successful extensions: 19253
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19243
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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