Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0791
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p pro...   105   6e-23
AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA...   102   3e-22
BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p pro...    29   6.2  
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P...    29   6.2  

>BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p
           protein.
          Length = 90

 Score =  105 bits (251), Expect = 6e-23
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +1

Query: 100 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
           +KMGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L
Sbjct: 4   SKMGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDIL 55



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +3

Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
           G    ++YFAI ENESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 50  GHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 90


>AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA
           protein.
          Length = 85

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/50 (88%), Positives = 46/50 (92%)
 Frame = +1

Query: 106 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 255
           MGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L
Sbjct: 1   MGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDIL 50



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +3

Query: 237 GSSGFVSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED 359
           G    ++YFAI ENESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 45  GHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 85


>BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p
           protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +1

Query: 52  YKL*SLYDFNKHLAFKNKMGERYNIHSQLEHLQ 150
           + L  + D NK + +++K  E + +H+++ H++
Sbjct: 193 HSLPMILDLNKEICYQDKKAELHQVHTEIAHVE 225


>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
           protein.
          Length = 1931

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +1

Query: 52  YKL*SLYDFNKHLAFKNKMGERYNIHSQLEHLQ 150
           + L  + D NK + +++K  E + +H+++ H++
Sbjct: 193 HSLPMILDLNKEICYQDKKAELHQVHTEIAHVE 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,644,668
Number of Sequences: 53049
Number of extensions: 413816
Number of successful extensions: 797
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)