Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0791
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   6.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.0  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 224 QESRCWFISHSYFV 183
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 327 PCGPPPEKPED*TLRF 374
           PC  PP  P++ T+ F
Sbjct: 313 PCTQPPSAPQNLTVNF 328


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +2

Query: 56  NFRVYTISTSILPLKIKWVKDTTFTVNLNIYRANI*AQATPTLQNMNGL 202
           +FR + +STSIL  K    ++T + + +   RA     ++ ++ + NG+
Sbjct: 398 SFREFAVSTSILGDKKTAEENTDYFMPIGRPRAKDYGHSSGSVIDRNGV 446


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 479 N*SIQIVPPKLNLLSIKTTN 538
           N ++ +  PKL++  +KT+N
Sbjct: 145 NRTVPVCAPKLHVFDLKTSN 164


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 71  TISTSILPLKIKWVKD 118
           +++   LPL I W+KD
Sbjct: 633 SVTRGDLPLSISWLKD 648


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/37 (24%), Positives = 14/37 (37%)
 Frame = +1

Query: 82  KHLAFKNKMGERYNIHSQLEHLQSKYIGTGHADTTKY 192
           K+    N +G R     +     S+Y  + H D   Y
Sbjct: 209 KYAISSNSLGSRSRSFQRTSSCHSRYEDSRHEDRNSY 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,486
Number of Sequences: 438
Number of extensions: 2722
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)