Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0788
         (537 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.3  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   3.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 371 LHHHCQDLLAGWQTLLSLGMXL 436
           LHHH   L+  +  +  LG+ L
Sbjct: 581 LHHHLSKLVTRFNEIFGLGLLL 602


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 371 LHHHCQDLLAGWQTLLSLGMXL 436
           LHHH   L+  +  +  LG+ L
Sbjct: 225 LHHHLSKLVTRFNEIFGLGLLL 246


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 214 FMLQGGDFTNHNGTGE 261
           F + GGDF   +GT E
Sbjct: 78  FWIHGGDFVTGSGTSE 93


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 162 ASAQGTXVFTRLGSDVTSQLNNNFSQWGIVNSDVE-EY 52
           A   G    ++L + + S   + FSQWG    D++ EY
Sbjct: 110 AILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEY 147


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 255 RAVMVGEVPSLQHEIGDDTMENGA 184
           RAV +G+ P  +  I   +MEN A
Sbjct: 707 RAVNIGQQPGAKESISYLSMENNA 730


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,256
Number of Sequences: 336
Number of extensions: 2415
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)