Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0788
         (537 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 169 GFGYKGSIFHRVIPN 213
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 169 GFGYKGSIFHRVIPN 213
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 169 GFGYKGSIFHRVIPN 213
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 238  TNHNGTGESPST-AISLKTR 294
            T+HN  G SPS+  +S++T+
Sbjct: 1476 TSHNKIGSSPSSPVLSVRTQ 1495


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 238  TNHNGTGESPST-AISLKTR 294
            T+HN  G SPS+  +S++T+
Sbjct: 1472 TSHNKIGSSPSSPVLSVRTQ 1491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,037
Number of Sequences: 438
Number of extensions: 2740
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)