Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0788
(537 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 110 5e-25
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 108 2e-24
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 106 1e-23
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 99 9e-22
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 99 9e-22
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 100 1e-21
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 99 2e-21
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 98 4e-21
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 95 2e-20
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 95 3e-20
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 94 5e-20
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 94 5e-20
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 86 2e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 85 2e-17
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 85 3e-17
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 84 7e-17
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 78 3e-15
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 77 8e-15
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 73 1e-13
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 60 1e-09
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 59 2e-09
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 51 6e-07
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 46 1e-05
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 34 0.069
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 31 0.37
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 31 0.37
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 31 0.37
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 29 2.0
At1g50520.1 68414.m05667 cytochrome P450 family protein similar ... 29 2.0
At5g47490.1 68418.m05864 expressed protein 29 2.6
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 29 2.6
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 6.0
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 6.0
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 27 6.0
At1g30700.1 68414.m03753 FAD-binding domain-containing protein s... 27 6.0
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 6.0
At4g03030.1 68417.m00411 kelch repeat-containing F-box family pr... 27 7.9
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 110 bits (265), Expect = 5e-25
Identities = 54/80 (67%), Positives = 60/80 (75%), Gaps = 7/80 (8%)
Frame = +1
Query: 40 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIFH 198
S P+VFFD+T+ AP GKIV+EL +D TPKT EN RALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 199 RVIPNFMLQGGDFTNHNGTG 258
RVIPNFM QGGDFT NGTG
Sbjct: 63 RVIPNFMCQGGDFTKGNGTG 82
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/81 (59%), Positives = 54/81 (66%)
Frame = +3
Query: 171 LRLQGLHFPSCHPQFHAARRGLHQP*RHGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 350
L +G F P F + GG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 351 DTXGSQFFITTVKTXWLDGRH 413
+T GSQFFI TVKT WLDG+H
Sbjct: 114 NTNGSQFFICTVKTDWLDGKH 134
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 108 bits (260), Expect = 2e-24
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 7/81 (8%)
Frame = +1
Query: 37 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIF 195
M+ P+V+FD+T+D P G+IV+EL +D TP+T EN RALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 196 HRVIPNFMLQGGDFTNHNGTG 258
HRVIPNFM QGGDFT NGTG
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTG 81
Score = 99 bits (238), Expect = 9e-22
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG+KFEDENF KHTGPG+LSMANAGA+T GSQFFI TVKT WLDG+H
Sbjct: 81 GGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKH 133
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 106 bits (254), Expect = 1e-23
Identities = 51/81 (62%), Positives = 59/81 (72%), Gaps = 7/81 (8%)
Frame = +1
Query: 37 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIF 195
MS PRVFFD+++ P+G+I +EL +D TP T EN RALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 196 HRVIPNFMLQGGDFTNHNGTG 258
HRVIP FM QGGDFT NGTG
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTG 81
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF+DENF KHTG G+LSMAN+G +T GSQFFI T KT WLDG+H
Sbjct: 81 GGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKH 133
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 99 bits (238), Expect = 9e-22
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF DENF LKHTGPGVLSMAN+G DT GSQFFITTV T WLDGRH
Sbjct: 109 GGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRH 161
Score = 92.7 bits (220), Expect = 1e-19
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIFHRVI 207
+V+FDV +D G++VI L PKT EN RALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 208 PNFMLQGGDFTNHNGTG 258
P+FM+QGGDFT+ NG G
Sbjct: 93 PSFMIQGGDFTHGNGMG 109
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 99 bits (238), Expect = 9e-22
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 7/78 (8%)
Frame = +1
Query: 46 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIFHRV 204
P+V+FD+TV G+IV+EL +D TP+T EN RALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 205 IPNFMLQGGDFTNHNGTG 258
IP FM QGGDFT NGTG
Sbjct: 65 IPKFMCQGGDFTAGNGTG 82
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG+KF+DENF KHTGPG+LSMANAGA+T GSQFFI T KT WLDG+H
Sbjct: 82 GGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKH 134
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Frame = +1
Query: 37 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIF 195
M+ P+VFFD+ + G++V+EL +DVTP+T N RALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 196 HRVIPNFMLQGGDFTNHNGTG 258
HR+IP FM QGGDFT NGTG
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTG 81
Score = 96.7 bits (230), Expect = 9e-21
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG+KFEDENF LKHTGPG+LSMAN+G +T GSQFFI T KT WLDG+H
Sbjct: 81 GGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKH 133
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 99.1 bits (236), Expect = 2e-21
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF DENF LKHTGPG LSMANAG DT GSQFFITTV T WLDGRH
Sbjct: 112 GGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRH 164
Score = 93.1 bits (221), Expect = 1e-19
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIFHRVI 207
+V+FDV +D G+IV+ L PKT EN RALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 208 PNFMLQGGDFTNHNGTG 258
P+FMLQGGDFT+ NG G
Sbjct: 96 PSFMLQGGDFTHGNGMG 112
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/70 (61%), Positives = 53/70 (75%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQG 228
+V+FDV + G+IV+ L +V PKT EN RALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 229 GDFTNHNGTG 258
GDFT NGTG
Sbjct: 156 GDFTEGNGTG 165
Score = 97.5 bits (232), Expect = 5e-21
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG SIYG KFEDENFTLKHTGPG+LSMANAG +T GSQFFI TVKT WLD +H
Sbjct: 165 GGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKH 217
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 95.5 bits (227), Expect = 2e-20
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNF 216
+V+FD++V + P+GK IVI L D P+T EN RALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 217 MLQGGDFTNHNGTG 258
M+QGGDF NGTG
Sbjct: 150 MIQGGDFEKGNGTG 163
Score = 94.3 bits (224), Expect = 5e-20
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GGKS+YG F+DENF L H GPGVLSMANAG +T GSQFFI T+KT WLDGRH
Sbjct: 163 GGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRH 215
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 94.7 bits (225), Expect = 3e-20
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG+KF DENF LKHTGPG LSMAN+G D+ GSQFFITTV T WLDG H
Sbjct: 136 GGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHH 188
Score = 90.2 bits (214), Expect = 8e-19
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIFHRVI 207
+V+FD+ ++ +P G+I+I L ++ PKT EN R+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 208 PNFMLQGGDFTNHNGTG 258
P FM+QGGDFT +G G
Sbjct: 120 PGFMIQGGDFTRGDGRG 136
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 94.3 bits (224), Expect = 5e-20
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = +1
Query: 34 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG--------YKGS 189
K P VF DV++ P+ +IVIEL +DV PKT EN RALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 190 IFHRVIPNFMLQGGDFTNHNGTG 258
FHRVI FM QGGDF+N NGTG
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
Score = 74.5 bits (175), Expect = 4e-14
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF DENF L H G GVLSMAN G +T GSQFFI + LDG+H
Sbjct: 85 GGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKH 137
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 94.3 bits (224), Expect = 5e-20
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Frame = +1
Query: 34 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG--------YKGS 189
K P VF DV++ P+ +IVIEL +DV PKT EN RALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 190 IFHRVIPNFMLQGGDFTNHNGTG 258
FHRVI FM QGGDF+N NGTG
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTG 85
Score = 74.5 bits (175), Expect = 4e-14
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF DENF L H G GVLSMAN G +T GSQFFI + LDG+H
Sbjct: 85 GGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKH 137
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
G SIYG+KFEDENFT KHTGPG+LSMAN+G +T G QFFIT K WLD +H
Sbjct: 107 GCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKH 159
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Frame = +1
Query: 46 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGE-----KGFGYKGSIFHRVIP 210
P VFFDV++ P G+I +EL +D+ PKT EN R CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 211 NFMLQGGDFTNHNGTG 258
+FM+Q GDF ++G+G
Sbjct: 92 DFMVQSGDFLKNDGSG 107
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 85.4 bits (202), Expect = 2e-17
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Frame = +1
Query: 37 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG-------YKGSIF 195
M+ P+VFFD+TVD P G+IVIEL +D+TP+T EN R LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 196 HRVIPNFMLQGGDFTNHN 249
++P+ M GGD N
Sbjct: 61 DHIVPDLMWCGGDIIFEN 78
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 85.0 bits (201), Expect = 3e-17
Identities = 45/86 (52%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +1
Query: 34 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG--------YKGS 189
K P+VF DV++D P +V EL +V PKT EN RALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 190 IFHRVIPNFMLQGGDFTNHNGT-GES 264
FHR++ Q GDF N NGT GES
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGES 88
Score = 43.6 bits (98), Expect = 9e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 258 GKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLD 404
G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD
Sbjct: 86 GESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLD 134
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 83.8 bits (198), Expect = 7e-17
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Frame = +1
Query: 37 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFG--------YKGSI 192
M + F D+++ G+IVIEL DV PKT EN R LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 193 FHRVIPNFMLQGGDFTNHNGTG 258
FHRVI FM+QGGD + ++GTG
Sbjct: 61 FHRVIKGFMIQGGDISANDGTG 82
Score = 81.0 bits (191), Expect = 5e-16
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG KF+DENF LKH G+LSMAN+G +T GSQFFITT +T LDG+H
Sbjct: 82 GGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKH 134
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 78.2 bits (184), Expect = 3e-15
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKG-------FGYKGSIFHRVI 207
RVF DV +D LG+IVI L V PKT EN RALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 208 PNFMLQGGDFTNHNG 252
F++QGGD + +G
Sbjct: 108 SGFVIQGGDIIHGDG 122
Score = 73.7 bits (173), Expect = 7e-14
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +3
Query: 264 SIYGNKFEDENFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRHCCL 422
SIYG F DENF ++H+ G+++MAN G D+ GSQFFITTVK WL+G H L
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVL 179
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SIYG+KFEDE N LKHTG G+LSMANAG +T GSQFFIT LDG+H
Sbjct: 71 GGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKH 124
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 61 DVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 240
+VT++ + +G +E+ +P+TC N L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 241 NHNGTGES 264
GES
Sbjct: 67 GTGRGGES 74
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SI+G +FEDE + +L+H P LSMANAG +T GSQFFITTV T WLD +H
Sbjct: 537 GGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKH 590
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/83 (36%), Positives = 42/83 (50%)
Frame = +1
Query: 10 IAYIANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGS 189
++ I N+ SLP + + LG I ++L + PKT EN C G+ Y
Sbjct: 463 VSDIGNSATTSLP----ENVIMHTTLGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNH 515
Query: 190 IFHRVIPNFMLQGGDFTNHNGTG 258
+FHRVI FM+Q GD +GTG
Sbjct: 516 LFHRVIRGFMIQTGDPLG-DGTG 537
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 255 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDG 407
GG SI+G KF DE +LKH G+LSMAN+G +T GSQFFIT K L+G
Sbjct: 62 GGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNG 113
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +1
Query: 85 LGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGE 261
LG I E+ D PK+ EN ALC G+ Y G+IFHR I FM+QGGD GTG+
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD---PKGTGK 61
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = +1
Query: 88 GKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGES 264
G + IEL D+ P+ CEN LC E+G+ Y G FHR I NFM+QGGD T GES
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTGTGKGGES 408
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTXGSQFFITTVKTXWLDGRH 413
GG+SI+G F+DE N L H+G GV+SMAN+G T GSQFF+ L+ +H
Sbjct: 405 GGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKH 458
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTXGSQFFITTVKTXWLDGRH 413
GG SIYG F DE + L+ + G+++MANA + ++ GSQFF T K WLD +H
Sbjct: 74 GGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKH 128
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 88 GKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTG 258
G I +EL PK+ N LC +G+ + +IFHRVIP F++QGGD T +GTG
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 85 LGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGES 264
LG IVI+L SD P TC+N LC K Y G +FH V +F Q GD T G+S
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDS 65
Score = 35.5 bits (78), Expect = 0.023
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +3
Query: 261 KSIYGNK---FEDE-NFTLKHTGPGVLSMANAGADTXGSQFFIT-TVKTXWLDGRH 413
K +YG + ++DE + LKH+ G ++MA+ G + SQF+ T +LDG+H
Sbjct: 68 KFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKH 123
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 49 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQG 228
+ F DV++D P+G+I+I L D P ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 229 G 231
G
Sbjct: 153 G 153
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 76 DAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 234
D G + IEL D P + C + G+ +KG +F RV+ +F++Q GD
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGD 132
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 33.9 bits (74), Expect = 0.069
Identities = 22/90 (24%), Positives = 36/90 (40%)
Frame = +1
Query: 73 DDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNG 252
D PLG++V+ L P T + +CT YK + H++ P G G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAG----RQG 135
Query: 253 TGESPSTAISLKTRISPLSTLDLASSPWLM 342
G + + R P +T + S +L+
Sbjct: 136 GGRRDTAEVGYSLRDLPRNTDVVNSKAFLL 165
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 88 GKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGG 231
G I +EL + +P+ + LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 88 GKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGG 231
G I +EL + +P+ + LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 88 GKIVIELRSDVTPKTCENXRALCTGEKGFGYKGSIFHRVIPNFMLQGG 231
G I +EL + +P+ + LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 176 VTRAPFSIVSSPISCCKEGTSPTITARG 259
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At1g50520.1 68414.m05667 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 GB:O81973 from [Glycine max]
Length = 533
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 145 RALCTGEK-GFGYKGSIFHRVIPNF-MLQGGDFTNHNGTGESPST-AISLK----TRISP 303
R C GEK G+ + G ++ F + GD N GE T A LK TR++P
Sbjct: 454 RRACPGEKLGYLFTGVAIGTMVQCFDWIIDGDKVNVEEAGEMTLTMAHPLKCTPVTRVNP 513
Query: 304 LSTLDLASSPWLM 342
L++ + WLM
Sbjct: 514 LASFESEDPKWLM 526
>At5g47490.1 68418.m05864 expressed protein
Length = 1361
Score = 28.7 bits (61), Expect = 2.6
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 10 IAYIANTGKMSLPRVFFD--VTVDDAPLGKIVIELRSDVTPKTCENXRALCTGEKGFGYK 183
+A + G MS F+ +VDDAP +L S ++ + GFG
Sbjct: 465 VANVTQNGPMSFSNGFYSRQESVDDAPQSFQSSQLFSPSAGRSSDGRPPHALVNFGFG-- 522
Query: 184 GSIFHRVIPNFMLQGGDFTNHNGTGESPSTAISLKTRIS 300
G + + LQ F + GTG S + ++L IS
Sbjct: 523 GKLILMKDDSGSLQNSSFGSQKGTGGSSISVLNLAEVIS 561
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -3
Query: 418 QQCLPSSQXVLT-----VVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 284
QQ SS VLT V+ P VS+P M TP P+C V F+SS
Sbjct: 27 QQAPSSSPPVLTCTEELVMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 379 VMKNWEPLVSAPALAMERTPGPVCLR 302
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 379 VMKNWEPLVSAPALAMERTPGPVCLR 302
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 20 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRV 136
+ +P C+ + + T P EKLLL TS+P RV
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRV 46
>At1g30700.1 68414.m03753 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 527
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 231 PSLQHEIGDDTMENGALVTEAFLASAQGTXVFTRLGSDVT--SQLNNNFSQWGIVNSDVE 58
P L E+ T+ + T + + + T + LG T S LN F + G+V SD
Sbjct: 276 PKLPDELFIRTVIDVVNGTVSSQKTVRTTFIAMFLGDTTTLLSILNRRFPELGLVRSDCT 335
Query: 57 EYSW 46
E SW
Sbjct: 336 ETSW 339
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 379 VMKNWEPLVSAPALAMERTPGPVCLR 302
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
>At4g03030.1 68417.m00411 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 442
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 284 KLIAVDGLSPVPLWLVKSPPCSMKLGMTRWKMEPL*PK 171
K++AVD PV L K ++G+ RW+ E PK
Sbjct: 325 KIVAVDCGKPVFFMLDKDWILRYEMGLNRWRKESSVPK 362
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,000,065
Number of Sequences: 28952
Number of extensions: 235850
Number of successful extensions: 708
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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