Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0784
(588 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 116 5e-25
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 97 3e-19
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 79 6e-14
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 69 1e-10
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 62 9e-09
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 62 1e-08
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 56 6e-07
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 55 1e-06
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 53 4e-06
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 45 0.001
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 41 0.019
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 40 0.033
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 40 0.033
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 39 0.100
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q4WK31 Cluster: Alpha/beta hydrolase, putative; n=9; Pe... 33 4.9
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 33 6.5
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 116 bits (278), Expect = 5e-25
Identities = 59/104 (56%), Positives = 68/104 (65%)
Frame = +2
Query: 116 PCLYHKPPTFLKSSFSADGVATDVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKA 295
P + P L +S D DVQ++D+SLQDYI+VKEKY +SAG YA KRFRKA
Sbjct: 9 PAVAETPDIKLFGKWSTD----DVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKA 64
Query: 296 QCPIVXRLTNSLMMHGXNTGKXLMAVXXVKHAFEMYSLXNWRKP 427
QCPIV RLTNS+MMHG N GK LM V VKHAFE+ L P
Sbjct: 65 QCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENP 108
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPREDS 479
IHL TGENP VLV AIINSGPREDS
Sbjct: 100 IHLLTGENPLQVLVNAIINSGPREDS 125
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 97.1 bits (231), Expect = 3e-19
Identities = 49/83 (59%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 182 DVQVSDMSLQDYISV-KEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGK 358
DVQ+SD+SL DYI V K+ ++AG Y+ KRFRKAQCPIV RLTNSLMMHG N GK
Sbjct: 19 DVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGK 78
Query: 359 XLMAVXXVKHAFEMYSLXNWRKP 427
LMAV +KHA E+ L + P
Sbjct: 79 KLMAVRIIKHAMEIIHLLTDQNP 101
Score = 41.5 bits (93), Expect = 0.014
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +3
Query: 393 LKCIHLXTGENPXXVLVTAIINSGPREDS 479
++ IHL T +NP V+V A++NSGPRED+
Sbjct: 90 MEIIHLLTDQNPIQVIVDAVVNSGPREDA 118
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 79.4 bits (187), Expect = 6e-14
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = +2
Query: 185 VQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGKXL 364
V+V D+SL DYI++ ++AG + KRFRKA+C IV RLTNSLMM+G N GK L
Sbjct: 29 VEVKDISLVDYITIGNGQP--LPHTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKL 86
Query: 365 MAVXXVKHAFEMYSLXNWRKP 427
+A VKHAFE+ +L + P
Sbjct: 87 LATRIVKHAFEIIALLTDQNP 107
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +2
Query: 185 VQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGKXL 364
V+++D+S+ +YI +KY + +S+G Y K F+K CPI+ RL SLM+ N+GK +
Sbjct: 31 VKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCSLMLKSRNSGKKI 90
Query: 365 MAVXXVKHAFEMYSLXNWRKP 427
+ VKHAF + + P
Sbjct: 91 KTIAIVKHAFYLLHKTTGKNP 111
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPREDS 479
+H TG+NP +LV AI N P EDS
Sbjct: 103 LHKTTGKNPIQLLVDAISNCAPHEDS 128
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 62.1 bits (144), Expect = 9e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 179 TDVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGK 358
T+V+V D L+DYI +K Y ++ G +A KRF KA+ PIV RL N +M NTGK
Sbjct: 22 TEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGK 78
Query: 359 XLMAVXXVKHAFEM 400
+A VK AF++
Sbjct: 79 KHLAYNIVKRAFDI 92
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPREDS 479
IH TGENP VLV A+ N+ PRE++
Sbjct: 93 IHERTGENPIQVLVQALENAAPREET 118
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +2
Query: 293 AQCPIVXRLTNSLMMHGXNTGKXLMAVXXVKHAFEMYSL 409
AQCPIV RLTNS+MMHG N GK LM V VKHAFE+ L
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHL 39
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 56.0 bits (129), Expect = 6e-07
Identities = 33/82 (40%), Positives = 43/82 (52%)
Frame = +2
Query: 182 DVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGKX 361
DV V D L+ YI +K I ++ G Y + RF KA+ PIV RL N +M G NTGK
Sbjct: 49 DVVVRDPGLRRYICLKP---VILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKK 105
Query: 362 LMAVXXVKHAFEMYSLXNWRKP 427
A VK AF++ + P
Sbjct: 106 HKAYNIVKRAFDLIYYKTGKNP 127
Score = 32.7 bits (71), Expect = 6.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPRED 476
I+ TG+NP V + AIIN+ PRE+
Sbjct: 119 IYYKTGKNPLQVFIDAIINTAPREE 143
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 179 TDVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGK 358
++V+V+D SL Y+++ + I +S G ++ + F KA IV RL N LM NTGK
Sbjct: 29 SEVKVTDPSLVRYVNLTPQ---IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGK 85
Query: 359 XLMAVXXVKHAFEMYSLXNWRKP 427
+A+ V+ AFE+ + R P
Sbjct: 86 KQLAIGIVRDAFELINKKTKRNP 108
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 53.2 bits (122), Expect = 4e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +2
Query: 179 TDVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGK 358
T+V+V D+ ++ Y+S+ I +S+G +A ++F K++ IV RL N+LM NTGK
Sbjct: 14 TEVEVKDLGIKRYVSLTP---VIVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGK 70
Query: 359 XLMAVXXVKHAFEMYSLXNWRKP 427
+ + V+ AF++ + + P
Sbjct: 71 KQVTLRAVEEAFDIVNKKTKQNP 93
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 182 DVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGKX 361
++ D S + Y++V ++ G +A K+F+K++ IV RL N LM G N GK
Sbjct: 38 EIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKK 92
Query: 362 LMAVXXVKHAFEM 400
A+ V+ AF++
Sbjct: 93 QQALKIVRDAFDI 105
Score = 32.7 bits (71), Expect = 6.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPREDS 479
+H T ENP VLV+A+ N+ PRE++
Sbjct: 106 VHERTDENPIQVLVSAVENAAPREET 131
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 41.1 bits (92), Expect = 0.019
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 182 DVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHGXNTGKX 361
+V+V+++SL+ YI++ + I ++A KA+ PI R SLM HG N+GK
Sbjct: 33 EVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKK 90
Query: 362 LMAVXXVKHA-FEMYSL 409
+A+ + A F ++S+
Sbjct: 91 RLAINIFEDACFIIHSM 107
Score = 38.7 bits (86), Expect = 0.100
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 402 IHLXTGENPXXVLVTAIINSGPREDS 479
IH T +NP VLV AI+NSGPRED+
Sbjct: 104 IHSMTKKNPLQVLVDAIVNSGPREDT 129
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +3
Query: 405 HLXTGENPXXVLVTAIINSGPREDS 479
HL +NP VLV AIINSGPREDS
Sbjct: 177 HLLLAQNPLQVLVNAIINSGPREDS 201
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 40.3 bits (90), Expect = 0.033
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1
Query: 399 ISNACLTXXTAISXLPVFXPCIIREFVRRSTIGHWALRKRLCAYXP 262
+S A LT A LP+F P I F+ ST+G W L KRLC+ P
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLP 46
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 38.7 bits (86), Expect = 0.100
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 182 DVQVSDMSLQDYISVKEKYXXIFTYSAGXYAHKRFRKAQCPIVXRLTNSLMMHG 343
DV+V D SL+ YI+++ + + ++ G +A K F KA IV RL N +M G
Sbjct: 28 DVEVKDPSLKPYINLEPR---LLPHTHGRHAKKHFGKANVHIVERLINKVMRSG 78
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 396 KCIHLXTGENPXXVLVTAIINSGPREDS 479
K I TG+NP VLV AI N+ PRED+
Sbjct: 112 KIIEKRTGKNPIQVLVWAIENAAPREDT 139
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 58 MAEENWNDDVXEAGSVVVETMSLPQAADIPEIKLFGRWS 174
M+E D+ E V E + Q A++P+IKLFGRWS
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWS 39
>UniRef50_Q4WK31 Cluster: Alpha/beta hydrolase, putative; n=9;
Pezizomycotina|Rep: Alpha/beta hydrolase, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 574
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 116 PCLYHKPPTFL---KSSFSADGVATDVQVSDMSLQDYIS 223
P L H+PPT L K++ DGVA +Q +D+S Q +S
Sbjct: 92 PYLQHEPPTHLQTGKTTTQRDGVAQSLQSADLSQQSEVS 130
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 79 DDVXEAGSVVVETMSLPQAADIPEIKLFGR 168
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,928,280
Number of Sequences: 1657284
Number of extensions: 8243158
Number of successful extensions: 15002
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15000
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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