Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0784
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    27   0.60 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   3.2  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   5.5  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 201 CLCRTTFPLKRSTAKYLPIQLAXMHTSVSVKPSAQ-SW 311
           C+C+  F  K    K +P++L    +  S  PSA+ +W
Sbjct: 95  CVCKKGFVRKTEFGKCIPLRLCPRISIASAHPSAEMNW 132


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 571 PRFAWVXTXAXRVKPSTGLTTXCXR 497
           PRF W  T      P TGLT  C +
Sbjct: 224 PRF-WEVTLISSTHPDTGLTIYCVK 247


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 26  NFYLVIEKYQSWPRRTGM 79
           +F  V+     WPRRTGM
Sbjct: 104 DFEKVLRSEGPWPRRTGM 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,987
Number of Sequences: 2352
Number of extensions: 8754
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)