Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0782
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6STE9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8F4J7 Cluster: HIT family hydrolase; n=4; Leptospira|R...    32   9.1  
UniRef50_Q5CQM1 Cluster: Putative uncharacterized protein; n=2; ...    32   9.1  

>UniRef50_A6STE9 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 468

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 473 QTSYLAN---VNRIVFFFFLKVSSNVYGSTLPRFGPA 372
           Q SYL N     R+ +F+F K  S +YGS +PR+  A
Sbjct: 222 QNSYLINGGPEGRVYWFYFFKHPSTLYGSAIPRYTKA 258


>UniRef50_Q8F4J7 Cluster: HIT family hydrolase; n=4; Leptospira|Rep:
           HIT family hydrolase - Leptospira interrogans
          Length = 176

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 247 FGRVELLQYCQPITSIFACRIHEGASRLYSSFRLFWKVNGTNAGPNRG 390
           F +  +L Y + +T   A  IHEG  +  S  +  W V G N G N G
Sbjct: 77  FPKRHILSY-EELTKEEAMEIHEGTVKAISILKKLWNVQGFNLGYNLG 123


>UniRef50_Q5CQM1 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 1474

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 488 RQKVRQTSYLANVNRIVFFFFLKVSSNVYGSTLPRFGPAFVPFTFQNSLNE 336
           R   RQ  Y + +  I FF ++  +   Y S L R GP  VP   Q+  NE
Sbjct: 206 RVSTRQLIYSSRIKIIDFFLYI-FNKKEYYSELIRLGPGIVPIVIQHIENE 255


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,764,989
Number of Sequences: 1657284
Number of extensions: 9276945
Number of successful extensions: 23882
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23874
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)