Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0782
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    25   1.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.4  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   5.8  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    23   5.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   7.6  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   7.6  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   7.6  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   7.6  

>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 98  SVSVAASWAPSTTVSSSACWRRVCLTMSEPS 6
           +VS AA W  + + S+S    +V LT+ +PS
Sbjct: 243 TVSFAAGWGKTESASASERKLKVELTVQDPS 273


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 6   RGLAHRQANPPPASRT 53
           RGL HRQ N PP   T
Sbjct: 673 RGLLHRQYNLPPLKDT 688



 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -1

Query: 501 ACQVTTKSSTNVI--SCEC 451
           ACQV T ++TN +   C+C
Sbjct: 179 ACQVCTPNATNTVWSHCQC 197


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +3

Query: 216 YIKQLGNVAPL 248
           YIKQ+GN++PL
Sbjct: 91  YIKQIGNMSPL 101


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 284 IG*QYCNSSTRPKGG 240
           +G QYC+S   P+GG
Sbjct: 20  VGGQYCSSDLCPRGG 34


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -1

Query: 501 ACQVTTKSSTNVI--SCEC 451
           ACQV T ++TN +   C+C
Sbjct: 179 ACQVCTPNATNTVWSHCQC 197


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -1

Query: 555 PILTXNNSPQLTVS*ILTACQVTTKSSTNVISCECK*DSFFFFFEGIVKCIR 400
           P +T   +   T     TAC  TT+ +   ++C+      F    G V C R
Sbjct: 293 PAMTTTTTTTTTTPTTATACPSTTEFNYKELNCQ-NCGRLFISNNGRVSCCR 343


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 228 LGNVAPLRTRGTVTVLSADNIDFRVSHTR 314
           +  V P+R      +L AD ++ R+ HT+
Sbjct: 422 INKVVPIRMDPNEELLGADLMEHRIRHTQ 450


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 420 GIVKCIRLDTSTIRS 376
           G++KCIRL  ++IRS
Sbjct: 254 GLLKCIRLLNTSIRS 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,290
Number of Sequences: 2352
Number of extensions: 10242
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)