Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0782
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126288-1|AAI26289.1|  553|Homo sapiens solute carrier family 2...    30   7.2  
AL590115-5|CAH71762.1|  118|Homo sapiens LIM homeobox 9 protein.       30   7.2  
AK074246-1|BAB85030.1|  552|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AJ295270-1|CAC82910.1|  553|Homo sapiens putative integral membr...    30   7.2  
AF440402-1|AAP97316.1|  553|Homo sapiens putative integral membr...    30   7.2  
AB074812-1|BAF51552.1|  553|Homo sapiens organic anion transport...    30   7.2  
AB062418-1|BAB83517.1|  553|Homo sapiens hUST3 protein.                30   7.2  

>BC126288-1|AAI26289.1|  553|Homo sapiens solute carrier family 22
           (organic anion/cation transporter), member 9 protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


>AL590115-5|CAH71762.1|  118|Homo sapiens LIM homeobox 9 protein.
          Length = 118

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 125 CTCVSLLTNSVSVAASWAPSTTVSSSACWRR 33
           C+C  L+T S+    S+  S   +S A WRR
Sbjct: 49  CSCFPLVTRSLRAPCSFTGSPEATSKASWRR 79


>AK074246-1|BAB85030.1|  552|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23666 fis, clone HEP04439. ).
          Length = 552

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


>AJ295270-1|CAC82910.1|  553|Homo sapiens putative integral membrane
           transport protein protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


>AF440402-1|AAP97316.1|  553|Homo sapiens putative integral membrane
           transport protein protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


>AB074812-1|BAF51552.1|  553|Homo sapiens organic anion transporter
           7 protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


>AB062418-1|BAB83517.1|  553|Homo sapiens hUST3 protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = -2

Query: 245 GGDISELFDVTFLVRLVFSETT---PAVAIEASICLLGTLRYLC--TCVSLLTNSVSVAA 81
           GG +S+ F   F++R  + +        A+  +  +  +LR+L     +SL+TN++ + A
Sbjct: 163 GGHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSLRFLSGIAAMSLITNTIMLIA 222

Query: 80  SWA 72
            WA
Sbjct: 223 EWA 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,868,785
Number of Sequences: 237096
Number of extensions: 1383397
Number of successful extensions: 2843
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2843
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)