Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0782
(603 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 5.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 9.3
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 65 ERSRDRRERGRSREHRIIPS 84
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 298 ERSRDRRERGRSREHRIIPS 317
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 314 ERSRDRRERGRSREHRIIPS 333
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 365 ERTRDRIVEVSSRIHLTIPS 424
ER+RDR SR H IPS
Sbjct: 313 ERSRDRRGRGRSREHRIIPS 332
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.0
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 44 CWRRVCLTMSEPS 6
CW ++C T++ P+
Sbjct: 489 CWWKICWTITTPA 501
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.0
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 44 CWRRVCLTMSEPS 6
CW ++C T++ P+
Sbjct: 542 CWWKICWTITTPA 554
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 321 GSLVYATRENRCYRLT 274
G +VY+ +NR +R+T
Sbjct: 216 GLIVYSWEQNRSWRIT 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,649
Number of Sequences: 438
Number of extensions: 2537
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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