Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0779
(557 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.22
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.22
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 25 0.69
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 3.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.7
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 22 3.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 6.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.22
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 263 NLQ-SVTYELHTTTFSSPGANLIQFMTLTLNDLSKVTRLGMAT 138
NLQ S Y+L T + G+N +F +TL ++++ G+A+
Sbjct: 1561 NLQPSSVYQLKVETHNVAGSNQAEFTFVTLTKEGELSKRGIAS 1603
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.22
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 263 NLQ-SVTYELHTTTFSSPGANLIQFMTLTLNDLSKVTRLGMAT 138
NLQ S Y+L T + G+N +F +TL ++++ G+A+
Sbjct: 1557 NLQPSSVYQLKVETHNVAGSNQAEFTFVTLTKEGELSKRGIAS 1599
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 24.6 bits (51), Expect = 0.69
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -1
Query: 296 FNIITYNDHDNNLQSVTYELHTTTFSSPGANLIQFMTLTLNDLSKVTRLGMATGSLNEL 120
F +I YN+ DN+ Q +T ++TF+S ++ T T+N S + G+ +L+ L
Sbjct: 209 FALIIYNNSDNSFQRLT----SSTFASDP----RYTTFTINGESFTLQSGIFGMALSPL 259
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 214 SNSLRSRTHGFQHTSSHYSR 233
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 214 SNSLRSRTHGFQHTSSHYSR 233
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLHYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 214 SNSLRSRTHGFQHTSSHYSR 233
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 214 SNSLRSRTHGFQHTSSHYSR 233
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 203 SNSLRSRTHGFQHTSSHYSR 222
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 302 KIISSLSNNYNYNNYNNNYKPLYYNIN 328
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -1
Query: 401 NSGIHTHTYVMKHTSIHFSR 342
++ + + T+ +HTS H+SR
Sbjct: 214 SNSLRSRTHGFQHTSSHYSR 233
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -1
Query: 221 SSPGANLIQFMTLTLNDLSKVTRLGMATGSLNELRGQQAVCLSAVHHQLEVD*AASLVAV 42
+S G L + L+ +V R + ++ ++ QAV +S ++ AAS+V
Sbjct: 57 TSSGVTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEK 116
Query: 41 VEDVL 27
+ D L
Sbjct: 117 LGDYL 121
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -1
Query: 308 LHSQFNIITYNDHDNNLQSVTYELH 234
L + +N YN+++NN + +L+
Sbjct: 85 LSNNYNYSNYNNYNNNYNNYNKKLY 109
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 314 KPLHSQFNIITYNDHDNNLQSVTYELH 234
K + S N YN+++NN + + Y ++
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,030
Number of Sequences: 438
Number of extensions: 2457
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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