Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0775
         (582 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6DNE7 Cluster: CurF; n=1; Lyngbya majuscula|Rep: CurF ...    35   1.6  
UniRef50_A5BL31 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_A7TEM5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  

>UniRef50_Q6DNE7 Cluster: CurF; n=1; Lyngbya majuscula|Rep: CurF -
            Lyngbya majuscula
          Length = 3195

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 439  FNQHLKELSQSSW--LKNLVQKAVIPTQCAL*GGFSEALNCW 558
            FN H  +LSQS W  LKN   KA +     L   F+  LN W
Sbjct: 2303 FNTHTAQLSQSDWQQLKNKASKANLTPSGVLLSAFASVLNYW 2344


>UniRef50_A5BL31 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 716

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = +2

Query: 98  KPFSDHLRNPIIESYLQKGSETGSGTLIILERKEVMLEVKKSCY*NYP 241
           K F DHL N  +E+YL++ + TG G  +  +   +M++++K+C  N+P
Sbjct: 383 KNFKDHLVNKTLENYLKEKASTGRG--VKGKLNNLMVQLRKNC--NHP 426


>UniRef50_A7TEM5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 877

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 373 EYIDKIFNLLMVVQVHDLMLKSFNQHLKELSQSSWLK 483
           ++IDK+ N L    +H+ +  +FN+   ++  SSWLK
Sbjct: 804 QFIDKLANELYYAFLHERVFITFNESKADIQHSSWLK 840


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,086,921
Number of Sequences: 1657284
Number of extensions: 9122243
Number of successful extensions: 18743
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18739
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)