Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0775
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.4  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    25   2.4  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            23   9.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 412  QVHDLMLKSFNQHLKELSQSSWLKN 486
            QVHD  ++ +  H K  S+ S ++N
Sbjct: 3098 QVHDNTIQRYKSHYKRTSKHSMIEN 3122


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +2

Query: 5   TRLTDNISLIFRTRTLSLVWRHDAPCVQKASKPFSDHLRNPIIE--SYLQKGSETGSGTL 178
           T     +  +FR+ T +  +      +Q+A     + LRNP+++    L K ++   G L
Sbjct: 27  TNHVQQLMKVFRSMTQNFDYTKKPSYLQRAKYGVQNQLRNPLVQKAGNLPKSAKLSDGCL 86


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = +1

Query: 109 RSPPESDYRILSTEGVRNWVWNPHHLGKKGS 201
           ++ P +      T  + +W+W    +G  GS
Sbjct: 108 KNGPSNSQASFRTNFLESWLWKTDKIGSSGS 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,056
Number of Sequences: 2352
Number of extensions: 9098
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)