Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0768
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 52 3e-07
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 50 1e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 48 8e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 39 0.003
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 39 0.003
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.005
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.006
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 36 0.033
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.075
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 32 0.30
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 32 0.30
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 0.70
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.70
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2) 30 1.2
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 30 1.6
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 2.1
SB_39353| Best HMM Match : 7tm_3 (HMM E-Value=3.2e-09) 29 3.7
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 4.9
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 27 8.6
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_50201| Best HMM Match : BCNT (HMM E-Value=9.8) 27 8.6
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +2
Query: 89 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
I ++D + AG +LVVIDF ATWCGPCK I P ++ + D +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVV 61
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
DVD+C+ A I +MPTF F N K+DE GA+
Sbjct: 66 DVDQCQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 226
+++ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 95 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
I++ + + + DKLVVIDF A WCGPC+ I PK ++A E + K
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAK 67
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 77 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P ++ + ++
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAV 60
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
DVD C+++A++ + +MPTF F KN K+DE GA+
Sbjct: 65 DVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 71 YLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVV 250
YLP + + + LA + V+DF A WCGPC PK +++A + +
Sbjct: 430 YLPSIVSEVNSKNFFTDVLAS--EDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAA 487
Query: 251 K 253
K
Sbjct: 488 K 488
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 32 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 211
+ F V F++ +S + D D + AG +++++F A WCG CK + P+
Sbjct: 519 WTFTQVSAFVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY- 577
Query: 212 EIAAE 226
E AAE
Sbjct: 578 ETAAE 582
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD--SIVVVK 253
K V+I+F A WCG CK + PK +E+ ++ D IV+ K
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAK 919
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 125 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD--SIVVVK 253
+A DK V ++F A WCG CK + P D++ + D IVV K
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAK 441
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 128 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
A A +K V+++F A WCG CK + P+ + A ++ +K
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIK 78
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 83 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 226
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 37.9 bits (84), Expect = 0.006
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 137 GDKLVVIDFMATWCGPCKMIGPKLDEI--AAEMSDSIVVVK 253
G+K +++F A WCG CK + P +++ A S +++ K
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAK 78
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.7 bits (81), Expect = 0.014
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 229
+ L++++F A WCG CK + P+ ++ A E+
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQEL 222
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +2
Query: 86 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 229
S +K+ DD+ ++ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 167 ATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
A WC PCK++ P+LD I AE + + K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAK 74
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLD 345
D+D ++A + +N++PT + +K GK ++
Sbjct: 76 DIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 107 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 229
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 34.3 bits (75), Expect = 0.075
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 238
++ V++DF A WC C+ + P D A ++ D+
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDN 100
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 247 CEGDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
C + + +YN+ +PT +GK ++EF G N
Sbjct: 195 CSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNN 233
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 35.1 bits (77), Expect = 0.043
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 173 WCGPCKMIGPKLDEIAAEMSDSIVVVK 253
WC PCK++ P+LD I AE + + K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAK 28
Score = 33.1 bits (72), Expect = 0.17
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 357
D+D ++A + +N++PT + +K GK +++F G
Sbjct: 30 DIDVMGELAFNFGVNAVPTVIGMKGGKVINKFEG 63
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.075
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 125 LAEAGDKLVVIDFMATWCGPCKMIGP 202
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 146 LVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 247
L +++F A WCG C+ + P+ + A E+ + V
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKV 132
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +2
Query: 116 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKL----DEIAAEMSDSIVV 247
K L +AG+ K++ + F A WC PC+ P L +E+ E D +++
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVII 64
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 31.1 bits (67), Expect = 0.70
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS 232
+++++DF A WC C + PK ++ A +++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDLA 69
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 238
+K+V I F A+WC PC+ P L + E S
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEEKIQS 186
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
V++ F A WCG CK PK ++ A D
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKD 195
>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
Length = 389
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 222 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 97
+A SS + P++ H H V+ + ++ P S++ S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
K V++ F A WCG CK P+L A D
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 77 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
P +H++D DD + + V++ F A WCG CK + P+ + A + +
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKE 130
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDE 214
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +2
Query: 134 AGD---KLVVIDFMATWCGPCKMIGPKL 208
AGD K+V I F A WC PC+ P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
>SB_39353| Best HMM Match : 7tm_3 (HMM E-Value=3.2e-09)
Length = 836
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 504 KNIFYSFIKNGIHVXXXXFHLSFHRRAAYNFSLYLLVFKDSC 379
K+ ++ F ++G HV H S RRA N SL L + +D+C
Sbjct: 3 KHRYWFFAESGSHVLCSPEHQSKSRRAGLNGSLGLDI-RDTC 43
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 249 TTTMESDISAAISSSLGPIILHG-PHQVAMKSITTSLSPASASLVFRSSES 100
++T E S+A++SSL P HG P ++ + ++TS ++SL +S +S
Sbjct: 913 SSTTEEMSSSALTSSLSPSSPHGAPLSLSTEELSTSSLSITSSLPQQSMQS 963
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 173 WCGPCKMIGPKLDEI--AAEMSDSIVVV 250
WCG CK + PK E A++S V+V
Sbjct: 8 WCGACKALRPKFAESKEVAQLSKKFVMV 35
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 146 LVVIDFMATWCGPCKMIGPKLDEIA 220
++++DF A WC C+ + P+L+ A
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAA 63
>SB_50201| Best HMM Match : BCNT (HMM E-Value=9.8)
Length = 254
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 5 CTLSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVV-IDFMATWCG 181
C +S C A +L + L K SI + +++ A+ GDK+VV +DF +W
Sbjct: 3 CAVSRLCL--AQPPKLLVVEEPVLQKPSIKLCAPENVCKTFADVGDKVVVYVDFGLSW-R 59
Query: 182 PCKM 193
PC +
Sbjct: 60 PCSL 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,392,407
Number of Sequences: 59808
Number of extensions: 299920
Number of successful extensions: 872
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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