Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0768
(593 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 55 3e-08
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 53 2e-07
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 51 5e-07
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 50 1e-06
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 1e-06
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 50 2e-06
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 49 2e-06
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 49 3e-06
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 49 3e-06
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 48 4e-06
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 48 6e-06
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 47 8e-06
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 47 8e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 47 8e-06
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 46 2e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 45 3e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 45 3e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 3e-05
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 45 4e-05
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 45 4e-05
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 44 6e-05
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 44 1e-04
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 44 1e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 43 1e-04
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 43 1e-04
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 43 1e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 43 2e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 41 7e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 40 0.001
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 38 0.004
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 38 0.004
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 38 0.004
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 38 0.007
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 38 0.007
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 36 0.015
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 36 0.020
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 36 0.020
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 36 0.027
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 35 0.047
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 35 0.047
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.062
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 34 0.062
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 34 0.062
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 34 0.082
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 34 0.082
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 33 0.11
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 33 0.14
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 33 0.19
At2g40380.1 68415.m04979 prenylated rab acceptor (PRA1) family p... 31 0.77
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 31 0.77
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 31 0.77
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 31 0.77
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 31 0.77
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 31 0.77
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 30 1.0
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 29 2.3
At4g31240.2 68417.m04435 expressed protein 28 5.4
At4g31240.1 68417.m04434 expressed protein 28 5.4
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 28 5.4
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 28 5.4
At2g17320.1 68415.m02001 pantothenate kinase-related similar to ... 28 5.4
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 28 5.4
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 28 5.4
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 28 5.4
At4g02330.1 68417.m00317 pectinesterase family protein contains ... 27 7.1
At2g45060.1 68415.m05609 expressed protein 27 7.1
At1g78740.1 68414.m09177 hypothetical protein 27 7.1
At5g05380.1 68418.m00580 prenylated rab acceptor (PRA1) family p... 27 9.4
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 27 9.4
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 89 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+ +D
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTD 90
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
DVD + E+N++++P VF+K G+++D G VD
Sbjct: 97 DVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +2
Query: 125 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
L + DK V++DF ATWCGPC+++ P L+E++ + D I VVK
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVK 113
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
D ++ +A++Y I ++PTF+ K+GK D F GA
Sbjct: 115 DTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGA 149
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 101 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
D D + AGDK+VV+D WCGPCK+I PK E++ + D +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMV 130
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
DVDE D+A E+N+ +MPTFV VK GK+++ GA D
Sbjct: 85 DVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
+KL+V+DF A+WCGPC+MI P + +A + +D
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADKFND 78
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 77 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 226
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
DK V++D+ ATWCGPC+ + P L+E++ + D I VVK
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVK 118
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
D ++ IA++Y I ++PTF+ K+G+ D F GA
Sbjct: 120 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGA 154
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 49.2 bits (112), Expect = 2e-06
Identities = 18/37 (48%), Positives = 29/37 (78%)
Frame = +2
Query: 131 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
+ +KL+VIDF A WCGPCK + P++ EIA++ S+++
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAV 76
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
DVD D+A Y ++P FVFVK G+++D GA D
Sbjct: 81 DVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPD 118
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 101 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
D D + AG+KLVV+D WCGPCK+I PK + +E D +V +K
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKAL-SEKYDDVVFLK 123
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 48.8 bits (111), Expect = 3e-06
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
V+++F+ATWCGPCK+I P ++ ++ E D + +VK
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVK 124
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 92 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A + S + K
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFK 65
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
DVDE + +A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 67 DVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 47.6 bits (108), Expect = 6e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
DVDE +++AS+ + +MPTF+F+K+G +D+ GAN D
Sbjct: 62 DVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPD 99
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +2
Query: 77 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D IV +K
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD-IVFLK 159
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +2
Query: 77 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D IV +K
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD-IVFLK 159
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 83 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 232
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A + S
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS 322
Score = 46.4 bits (105), Expect = 1e-05
Identities = 16/36 (44%), Positives = 30/36 (83%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
D+D+ D+A+ +NI+S+PTF F+++GK++D+ GA+
Sbjct: 330 DIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGAD 365
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 89 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 232
I K+S D K A+ K+VV +F ATWCGPCK++ P E++ + S
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHS 75
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
DVDE D +S ++I + PTF F+KNG+++ + GAN
Sbjct: 83 DVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 89 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVKGTLMS 268
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++ AE + +++ +K
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQL-AETNPNVMFLKVNQEE 146
Query: 269 ART 277
RT
Sbjct: 147 LRT 149
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 95 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 220
+ DL L AGDKLVV+DF + CG CK + PK+ +IA
Sbjct: 98 VTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 95 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM+ +
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDV 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 116 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
K + A KL+VIDF ATWC PC+ I P ++A + D +
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
DVDE +A E+ + +MPTF+F+K G+ + GA
Sbjct: 65 DVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGA 99
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
D DE + +AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 66 DTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 83 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 229
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 57
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 137 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
GD+ V ++DF ATWCGPC ++ +L+ +A E + ++VK
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVK 131
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
VV+DF A WCGPCKMI P ++++A + I K
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYK 135
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
+ DE + +Y + S+PT + G+K D GA
Sbjct: 137 NTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGA 171
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 369
DVDE + +A E+ + +MPTFVF+K G +D GA D
Sbjct: 65 DVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 116 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
K + A KL+VIDF A+WC PC+ I P E+A + ++ +
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIVVV 250
SD L + +G K V+++F A WCG C+ + P LDE+A SDS VV+
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVI 429
Score = 37.5 bits (83), Expect = 0.007
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIVVV 250
SD L + +G K V+++F A WCG C+ + P LDE+A SDS VV+
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVI 429
Score = 37.5 bits (83), Expect = 0.007
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 104 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 220
+D L D+ V +DF A WCGPCKMI P ++E+A
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELA 118
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
+ DE +Y + S+PT + NG+K D GA
Sbjct: 131 NTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +2
Query: 92 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 232
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A + +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFA 134
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
+ DE + A+ Y I S+PT + K G+K D GA
Sbjct: 143 NTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Frame = +2
Query: 62 VSIYLPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 220
V+++ I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 357 VAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Query: 221 AEMSD--SIVVVK 253
+ S+++ K
Sbjct: 417 LSFQNDPSVIIAK 429
Score = 36.3 bits (80), Expect = 0.015
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMS 232
+V++F A WCG C+ + P+ ++ A+E+S
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELS 76
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/35 (40%), Positives = 27/35 (77%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
DV+E + ++E+N+ + PT VF+K+G+++D+ GA
Sbjct: 46 DVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGA 80
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 167 ATWCGPCKMIGPKLDEIAAEMSDSIVV 247
A WC PCK I P ++A+ I V
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFV 43
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 38.3 bits (85), Expect = 0.004
Identities = 13/36 (36%), Positives = 27/36 (75%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
DV+E + + E+N+++ PT VF+K+G+++D+ G +
Sbjct: 100 DVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 71 YLPKMSIH-IKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
Y K +H + + + ++ EA K++V++F A+WC P K I P E+A+ + I
Sbjct: 36 YFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMI 95
Query: 242 VV 247
V
Sbjct: 96 FV 97
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 38.3 bits (85), Expect = 0.004
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
V+++F +WCGPC+M+ +DEIA + + +
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKL 117
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 277 IASEYNINSMPTFVFVKNGKKLDEFSG 357
+A EY I ++P + KNG+K + G
Sbjct: 130 VAEEYEIKAVPVVLLFKNGEKRESIMG 156
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLD---EIAAEMSDSIVVVK 253
+ +DF A WCG CK + P+LD I A++ IV+ K
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAK 89
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 211
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 212 EIAA--EMSDSIVVVK 253
++ A + + S+++ K
Sbjct: 64 KLGASFKKAKSVLIAK 79
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVKGTL 262
+K V+++F A WCG CK + P +++A VV L
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANL 199
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 211
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 212 EIAA--EMSDSIVVVK 253
++ A + + S+++ K
Sbjct: 64 KLGASFKKAKSVLIAK 79
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVKGTL 262
+K V+++F A WCG CK + P +++A VV L
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANL 199
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 36.3 bits (80), Expect = 0.015
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
++I++MA+WC C + PKL+++AAE ++
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNN 149
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 235
+K ++ +++A D + V F A WCGPC+ I P + E++ + D
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPD 137
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 235
+K + + L++A D + V F A WCGPC++I P + E++ + D
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPD 102
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 35.5 bits (78), Expect = 0.027
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
K + + F A WCGPC+ P+L E+ E+S +
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSSKV 76
Score = 35.1 bits (77), Expect = 0.036
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 92 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
++ D K +++ K +++ F A WC PC+ PKL E+ ++ +
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKE 394
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 34.7 bits (76), Expect = 0.047
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-SDSIVVVK 253
++ V+++F A WCG C+ + P+ A E+ D +V+ K
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAK 158
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVVK 253
K V+++ A WCG C+ + P +++A + DS+V+ K
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 34.7 bits (76), Expect = 0.047
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-SDSIVVVK 253
++ V+++F A WCG C+ + P+ A E+ D +V+ K
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAK 158
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVVK 253
K V+++ A WCG C+ + P +++A + DS+V+ K
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAE 226
VVI +MA WC C + PKL+++AAE
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 34.3 bits (75), Expect = 0.062
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
+ +E +I+ Y++ ++P FVF K+GK +D GA+
Sbjct: 59 EAEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGAD 94
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 34.3 bits (75), Expect = 0.062
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 137 GDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
G KL+V+D CGPC + P + +++ MS+++V +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFAR 244
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 262 DECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
D C + + N+ +PTF+F+++G+ + G+
Sbjct: 251 DSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGS 283
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +2
Query: 17 LACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMI 196
L CF AF +I +S+++P ++ +K D L+ ++ +++ F+A+W G K
Sbjct: 99 LRCFTLAFGWIIF--LSLFIPVNAL-LKGQDRLRKKIERVLVEMICSFFVASWTGVVKYH 155
Query: 197 GPK 205
GP+
Sbjct: 156 GPR 158
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 33.9 bits (74), Expect = 0.082
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 77 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
P S+ + S D+L T E L +++F A WCG CK + P+ + A + +
Sbjct: 162 PSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKV 214
Score = 31.9 bits (69), Expect = 0.33
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 146 LVVIDFMATWCGPCKMIGPKLDEIAAEM 229
+V+++F A WCG C+ + P +++A+ +
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTL 75
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 360
D+DEC + +I PTF F ++G+K+DE GA
Sbjct: 81 DIDECPETTR--HIRYTPTFQFYRDGEKVDEMFGA 113
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 107 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 232
DD+K+ + A VI++ A+WCG C I P +++ S
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFS 73
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 363
+ +E +I+ Y++ +P FVF K+GK +D GA+
Sbjct: 59 EAEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 32.7 bits (71), Expect = 0.19
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 146 LVVIDFMATWCGPCKMIGPKLDEIA 220
+V+++F A WCG CK + P +++A
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 32.3 bits (70), Expect = 0.25
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 241
++L +++F A WCG CK + P+ A + +
Sbjct: 180 NELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKV 213
>At2g40380.1 68415.m04979 prenylated rab acceptor (PRA1) family
protein contains Pfam profile PF03208: Prenylated rab
acceptor (PRA1)
Length = 213
Score = 30.7 bits (66), Expect = 0.77
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 288 LAGDVLALINVPFTTTMESDISAAISSSLGPIILHGPHQVAMKSITTSLSPASASLV 118
L G VL I V F T++ S +++A++ + + LHG +V PA+A L+
Sbjct: 137 LLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPANAGLL 193
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDE 348
D+D+C I + N+ +PT KNG ++ E
Sbjct: 651 DIDKCPSIGNAENVRVVPTVKIYKNGSRVKE 681
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 149 VVIDFMATWCGPCKMIGPKLDEIAAE 226
V++ F A WCGPC+ + P L+++ +E
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSE 255
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 98 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 151
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFS 354
+ DE ++A I ++P F F KNG L+ F+
Sbjct: 166 EYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 98 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 98 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 235
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFS 354
+ DE ++A I ++P F F KNG L+ F+
Sbjct: 153 EYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 140 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
+ +++F A WCG C+ + P+ A E+ + K
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAK 153
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVVK 253
K V+++ A WCG C+ P +++ + DS+VV K
Sbjct: 456 KDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAK 494
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDE 348
DV+E +A +I +PTF KNG K+ E
Sbjct: 643 DVEESMALAKAESIRKVPTFKMYKNGDKVKE 673
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKL 208
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 143 KLVVIDFMATWCGPCKMIGPKL 208
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/44 (20%), Positives = 25/44 (56%)
Frame = +2
Query: 122 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVVK 253
+L +++++ + + CGPC+ + P L+++ E + + V+
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVE 479
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 7 YVVTCVFLICILNCDIIFSFNLSAQDVHSHQRFRRPED 120
YV FL+ ++ +++ F+ SA+ VH+H+R R E+
Sbjct: 16 YVAMASFLLWLV---LLYLFSSSAKTVHNHERLFRQEN 50
>At2g17320.1 68415.m02001 pantothenate kinase-related similar to
Probable pantothenate kinase 1 (Pantothenic acid kinase
1) (Swiss-Prot:Q8L5Y9) [Arabidopsis thaliana]; similar
to Pantothenate kinase 4 (Pantothenic acid kinase 4)
(hPanK4) (Swiss-Prot:Q9NVE7) [Homo sapiens]; contains
Pfam PF01937: Protein of unknown function
Length = 361
Score = 27.9 bits (59), Expect = 5.4
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = -3
Query: 372 FVDVSAREFVQFLAILNEDERRHRVNVVLAGDVLALINVPFTTTMESDISAAISSSLGPI 193
FVD S + + + + R + VVLA + L IN T T +DI + + G +
Sbjct: 212 FVDNSGADIILGILPFARELLRRGIQVVLAANELPAIN-DVTYTELTDIVSQLKDGNGQL 270
Query: 192 ILHGPHQVAMKS-----ITTSLSPASASLVFRSSES-LM*MDILGR*IET 61
I ++ + + LS S L + SS++ L+ ++ +GR IET
Sbjct: 271 IGVDTSKLLIANSGNDLAVIDLSRVSHELAYLSSDADLVILEGMGRGIET 320
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +2
Query: 11 LSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCK 190
++L L A ++L + I L K + + ++ E D + F WC CK
Sbjct: 1 MTLGARLVAPMIILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCK 59
Query: 191 MIGPKLDEI--AAEMSDSIVV 247
+G +++ A E D I V
Sbjct: 60 KLGNLWEDLGKAMEGDDEIEV 80
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +2
Query: 11 LSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCK 190
++L L A ++L + I L K + + ++ E D + F WC CK
Sbjct: 1 MTLGARLVAPMIILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCK 59
Query: 191 MIGPKLDEI--AAEMSDSIVV 247
+G +++ A E D I V
Sbjct: 60 KLGNLWEDLGKAMEGDDEIEV 80
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +2
Query: 11 LSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCK 190
++L L A ++L + I L K + + ++ E D + F WC CK
Sbjct: 1 MTLGARLVAPMIILLLFIPIELVKAEVITLTPETFSDKIKEK-DTAWFVKFCVPWCKHCK 59
Query: 191 MIGPKLDEI--AAEMSDSIVV 247
+G +++ A E D I V
Sbjct: 60 KLGNLWEDLGKAMEGDDEIEV 80
>At4g02330.1 68417.m00317 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 573
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 425 LRTTLVSIYLCLRIVVLSLSTLAPENSSS 339
L+ LV+++L L+ + ++ TL P NSSS
Sbjct: 4 LKLFLVTLFLSLQTLFIASQTLLPSNSSS 32
>At2g45060.1 68415.m05609 expressed protein
Length = 272
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 259 VDECEDIASEYNINSMPTFVFVKNG 333
+D DIASEYN+ F +K+G
Sbjct: 90 IDSLRDIASEYNVYEQMVFGKIKDG 114
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 407 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 306
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At5g05380.1 68418.m00580 prenylated rab acceptor (PRA1) family
protein weak similarity to prenylated Rab acceptor 1
(PRA1) [Homo sapiens] GI:4877285; contains Pfam profile
PF03208: Prenylated rab acceptor (PRA1)
Length = 217
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 276 VLALINVPFTTTMESDISAAISSSLGPIILHGPHQVAMKSITTSLSPASASLV 118
V+ I V F T++ S +++A+ G + LHG +V PA+ L+
Sbjct: 142 VILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLL 194
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 256 DVDECEDIASEYNINSMPTFVFVKNGKKLDE 348
DV+E +A +I +PTF K G+K+ E
Sbjct: 634 DVEESLALAKAESIKKIPTFKIYKKGEKVKE 664
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,650,516
Number of Sequences: 28952
Number of extensions: 215942
Number of successful extensions: 743
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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