Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0764
(552 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 23 1.3
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 23 2.3
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 22 4.1
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 22 4.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 5.4
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 21 7.2
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 7.2
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 7.2
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 7.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.5
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.3
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +1
Query: 214 LLNCYTPNYDLKNAE--------ELKFDFRFKIAVFQMHHITF 318
L+N YT NY+ K +E +L F F + I +F +++I +
Sbjct: 119 LINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYY 161
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 238 SLEYNN*ADMRLLTSS*VNIIKSVNNFFIINTLLL 134
+L Y + L ++I+++N F+ ++TLL+
Sbjct: 240 ALSYERLNEFMRLVEEIEDVIEAINGFYGVHTLLI 274
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 49 LISIPNFELIRQNHVQRFHYLLSYIR 126
L I N + + HV+ HY S +R
Sbjct: 366 LYGIENLQAFIRKHVELAHYFESLVR 391
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 448 MNVPXLECNKYKRSPSQ*RLSGRFIYKTTVASTS 347
+NVP K K++ + G F ++ TV +T+
Sbjct: 110 VNVPEYPWMKEKKTTRKSSQQGNFEFRNTVGATT 143
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 58 IPNFELIRQNHVQRFHYLLSYI 123
I F + + HV + H+LL I
Sbjct: 1411 IEMFSMFERFHVNKLHFLLQII 1432
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 85 FDGLTRNLVYLLRTD 41
F G+ + VYL+RTD
Sbjct: 247 FQGIGTDNVYLIRTD 261
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.0 bits (42), Expect = 7.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 281 LRSQYFRCITLLLGMAINTGTYTR*RDCRLVNESPT*SL 397
L SQ+ L + I G YT+ + C + + P SL
Sbjct: 140 LYSQFILYFLLFATLKILLGKYTQLKACLMEEKRPMVSL 178
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.0 bits (42), Expect = 7.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 281 LRSQYFRCITLLLGMAINTGTYTR*RDCRLVNESPT*SL 397
L SQ+ L + I G YT+ + C + + P SL
Sbjct: 140 LYSQFILYFLLFATLKILLGKYTQLKACLMEEKRPMVSL 178
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 7.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 281 LRSQYFRCITLLLGMAINTGTYTR*RDCRLVNESPT*SL 397
L SQ+ L + I G YT+ + C + + P SL
Sbjct: 460 LYSQFILYFLLFATLKILLGKYTQLKACLMEEKRPMVSL 498
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 543 FTFFVDQNDXGI 508
FT+F D+N+ G+
Sbjct: 1262 FTYFEDKNEIGV 1273
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 543 FTFFVDQNDXGI 508
FT+F D+N+ G+
Sbjct: 1262 FTYFEDKNEIGV 1273
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,272
Number of Sequences: 336
Number of extensions: 2240
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -