Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0758
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              52   6e-09
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              44   2e-06
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              43   3e-06
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              42   6e-06
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              42   6e-06
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              42   6e-06
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              38   1e-04
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               36   3e-04
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    36   4e-04
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              33   0.002
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    26   0.25 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    26   0.25 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.78 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.78 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   2.4  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   7.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.2  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 51.6 bits (118), Expect = 6e-09
 Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTF-IVFVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKTF I+F +CV +     +E K  ++  +  C+ ET   +++++++  G+   E+E ++
Sbjct: 1   MKTFVIIFAICVCVGAMTHEELKTGIQTLQPICVGETGTSQKIIDEVYNGNVNVEDENVQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
            Y  CM+ K  ++ ++GN
Sbjct: 61  SYVECMMKKFNVVDENGN 78


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTFIVFVVCVVLAQALTDEQKEN-LKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKT ++     +   AL+ +  +N ++  ++ C+++T  ++Q++N +  G    E+E ++
Sbjct: 1   MKTILIISAICICVGALSIKDFQNAIRMGQSICMAKTGINKQIINDVNDGKINIEDENVQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
            Y  C + K   + KDGN
Sbjct: 61  LYIECAMKKFSFVDKDGN 78


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTFIV-FVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKT +V F  C+ +     +E K  L+  +  C +E+  D+Q V+ +   +F  E+E  +
Sbjct: 1   MKTIVVIFAFCICVNAMTIEELKIQLRDVQEICKAESGIDQQTVDDINEVNFDVEDEKPQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
           +Y  C+L +  ++ + GN
Sbjct: 61  RYNECILKQFNIVDESGN 78


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTFIV-FVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKT +V F  C+ +     +E K  L   +  C +E+  D+Q V+ +   +F  E+E  +
Sbjct: 1   MKTIVVIFAFCICVNAMTIEELKIQLHDVQEICKTESGIDQQTVDDINEVNFDVEDEKPQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
           +Y  C+L +  ++ + GN
Sbjct: 61  RYNECILKQFNIVDESGN 78


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 27  MKTFI-VFVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKT + +F  CV +     +E K  L   ++ C +ET  D+Q  N +  G+   E++ ++
Sbjct: 1   MKTIVLIFGFCVCVGALTIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQ 60

Query: 204 KYALCMLIKSQLMTKD 251
            Y  C+L    ++ K+
Sbjct: 61  LYCECILKNFNILDKN 76



 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/66 (21%), Positives = 25/66 (37%)
 Frame = +2

Query: 191 RTIEEVCSMYADQITADDQGREFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTA 370
           + ++  C          D+   FK     A +    D+  V++L+  C      +PH  A
Sbjct: 57  KKVQLYCECILKNFNILDKNNVFKPQGIKAVMELLIDENSVKQLVSDCSTISEENPHLKA 116

Query: 371 WNYVKC 388
              V+C
Sbjct: 117 SKLVQC 122


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 25/70 (35%), Positives = 36/70 (51%)
 Frame = +3

Query: 81  DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGNS 260
           DE +E   K+R  C+ ETK   + V   + G+F  E+E LK Y  C+L K  +M K    
Sbjct: 30  DEFREMTSKYRKKCIGETKTTIEDVEATEYGEF-PEDEKLKCYFNCVLEKFNVMDKKNGK 88

Query: 261 RRTSLWLKCL 290
            R +L  K +
Sbjct: 89  IRYNLLKKVI 98


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTFIVF-VVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKTF++   +CV +     +E +  L+     C  ET  D+Q  +  + G+   E+E ++
Sbjct: 1   MKTFVIISAICVCVGALTLEEFQIGLRAVVPICRIETSIDQQKEDDFRDGNIDVEDEKVQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
            ++ C++ K       GN
Sbjct: 61  LFSECLIKKFNGYDDGGN 78


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 111 RADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKD 251
           + DC  E+K     + K+K GD + +++ LK Y  C + K  ++ K+
Sbjct: 26  KKDCRKESKVSWAALKKMKAGDMEQDDQNLKCYLKCFMTKHGILDKN 72



 Score = 29.9 bits (64), Expect = 0.021
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 242 DQGREFKKDVALAKVPNA-EDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHRERPE 409
           D+  E     AL  +P + +D  K  KL + C + +   P + A+  VKCY    PE
Sbjct: 70  DKNAEVDVQKALRHLPRSMQDSTK--KLFNKCKSIQNEDPCEKAYQLVKCYVEFHPE 124


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 20/78 (25%), Positives = 40/78 (51%)
 Frame = +3

Query: 24  IMKTFIVFVVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           ++ T + FV    +     D+ ++  K  R  CL +    E+LV+ ++ G+F  +++ L+
Sbjct: 8   LLITIVTFVALKPVKSMSADQVEKLAKNMRKSCLQKIAITEELVDGMRRGEFPDDHD-LQ 66

Query: 204 KYALCMLIKSQLMTKDGN 257
            Y  C ++K     K+GN
Sbjct: 67  CYTTC-IMKLLRTFKNGN 83



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 362 QTAWNYVKCYHRERPE 409
           Q  + YV+C++++ PE
Sbjct: 123 QKTYQYVQCHYKQNPE 138


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +3

Query: 27  MKTFIVF-VVCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLK 203
           MKT ++   +CV +     +E +  L+     C  ++  DE+  +  + G    ENE ++
Sbjct: 1   MKTIVIISAICVCVGALTLEELQIGLRAVIPVCRIDSGIDEKKEDDFRNGIIDVENEKVQ 60

Query: 204 KYALCMLIKSQLMTKDGN 257
            ++ C++ K       GN
Sbjct: 61  LFSECLIKKFNAYDDGGN 78



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = +2

Query: 227 QITADDQGREFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCY 391
           +  A D G  F + V         D+ +V KLI  C A      H  +   +KC+
Sbjct: 69  KFNAYDDGGNFNEVVVREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIKCF 123


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +2

Query: 209 CSMYA--DQITADDQGREFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYV 382
           C MY   +  +  D      +D+ L  +P+   + + + ++  CL   G+      +N  
Sbjct: 72  CYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQE-RAQSVMGKCLPTSGSDNCNKIYNLA 130

Query: 383 KCYHRERPE 409
           KC     P+
Sbjct: 131 KCVQESAPD 139


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +2

Query: 209 CSMYA--DQITADDQGREFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYV 382
           C MY   +  +  D      +D+ L  +P+   + + + ++  CL   G+      +N  
Sbjct: 72  CYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQE-RAQSVMGKCLPTSGSDNCNKIYNLA 130

Query: 383 KCYHRERPE 409
           KC     P+
Sbjct: 131 KCVQESAPD 139


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 DQGREFKKDVALAKVPNAEDKLKVEK 319
           D+ RE++KD    K+ N ++KL  E+
Sbjct: 7   DRNREYRKDRRYEKLHNEKEKLLEER 32


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 242 DQGREFKKDVALAKVPNAEDKLKVEK 319
           D+ RE++KD    K+ N ++KL  E+
Sbjct: 7   DRNREYRKDRRYEKLHNEKEKLLEER 32


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 242 DQGREFKKDVALAKVPNAEDK 304
           D+ RE+KKD    ++ N E+K
Sbjct: 256 DRSREYKKDRRYDQLHNVEEK 276


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +2

Query: 209 CSMYADQITADDQGREFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKC 388
           C++    I  +D+  +  K V +A   N    + V+ L +   ANK     +   N++ C
Sbjct: 81  CALEKSHIIQNDE-IQLDKLVEMANRKNIS--IDVKMLSECINANKSTDKCENGLNFIIC 137

Query: 389 YHR 397
           + +
Sbjct: 138 FSK 140


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 545 LFCHXPXGHWG 577
           +FCH   GH+G
Sbjct: 272 MFCHTGLGHYG 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,284
Number of Sequences: 438
Number of extensions: 2816
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)