Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0753
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 455 WVNVNGFWYTTRFFTSSYLYYNYI 526
           W   +GFW TT +     +Y N I
Sbjct: 487 WYLDHGFWGTTEYHNWRVVYNNKI 510


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 55  SCVVARSMMFVACGQSRA 2
           SCVVA  ++ + CG+ R+
Sbjct: 298 SCVVALIILILQCGRVRS 315


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 55  SCVVARSMMFVACGQSRA 2
           SCVVA  ++ + CG+ R+
Sbjct: 224 SCVVALIILILQCGRVRS 241


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 318 GFLDYIKNDKDIE 280
           GFL Y K D+D++
Sbjct: 84  GFLTYTKADRDVD 96


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 62  FLFDTHLASVFVTVLYTSLMRIFNNNNIS*IY 157
           FLF     S+ +T  Y      FN++N++ +Y
Sbjct: 237 FLFVLSTFSICITQFYYCYDSGFNSDNLTDVY 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,323
Number of Sequences: 336
Number of extensions: 2531
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)