Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0752
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical pr... 114 5e-26
U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical pr... 30 0.99
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 29 1.7
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 29 1.7
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical p... 28 4.0
AC006618-8|AAK68245.1| 101|Caenorhabditis elegans Hypothetical ... 28 5.3
AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi... 27 7.0
AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna ... 27 7.0
AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 115 bits (276), Expect = 3e-26
Identities = 47/85 (55%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 RHEADRNYALGFYMREHKCYPEKT-NLRECMDFYFQCCSMEANCDIMSIMAATLANGGIC 177
R ADRNYAL ++M+E++C+P++T +L + +DFYFQ CS+E C+ +++MA+TLANGG+C
Sbjct: 309 RATADRNYALSYFMKENRCFPKETESLTDALDFYFQLCSVEVTCESLAVMASTLANGGVC 368
Query: 178 PITDEKVLRPDSVRNVLSLMHSCGM 252
PIT+E + P+ R+VLSLM+SCGM
Sbjct: 369 PITNETCVDPNPCRDVLSLMYSCGM 393
Score = 109 bits (261), Expect = 2e-24
Identities = 47/62 (75%), Positives = 53/62 (85%)
Frame = +3
Query: 255 DYSGQFAFKVGLPAKSGVSGAMLIVVPNVMGICTWSPPLDPLGNSCRGLQFCDDLIKRFN 434
D SGQF+F VGLPAKSGVSGAM++VVPNVMGIC +SPPLD LGNSCRG+ FC L+ FN
Sbjct: 395 DASGQFSFNVGLPAKSGVSGAMIVVVPNVMGICLFSPPLDSLGNSCRGVAFCKKLVSTFN 454
Query: 435 FH 440
FH
Sbjct: 455 FH 456
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 114 bits (275), Expect = 4e-26
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 RHEADRNYALGFYMREHKCYPEKTN-----LRECMDFYFQCCSMEANCDIMSIMAATLAN 165
R ADRNYAL +YM+E++C+P+++ LRE +D YFQ CS+E NCD ++MAATLAN
Sbjct: 323 RDTADRNYALSYYMKEYRCFPDESQVYEKGLREELDLYFQLCSLETNCDTAAVMAATLAN 382
Query: 166 GGICPITDEKVLRPDSVRNVLSLMHSCGM 252
GGICP+T EK L R++LSLM+SCGM
Sbjct: 383 GGICPLTTEKCLGSRPCRDILSLMYSCGM 411
Score = 106 bits (254), Expect = 1e-23
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +3
Query: 255 DYSGQFAFKVGLPAKSGVSGAMLIVVPNVMGICTWSPPLDPLGNSCRGLQFCDDLIKRFN 434
DYSG+FAF+VGLPAKSGVSG M++V+PNVMGI +SPPLD GNSCRG+ FC LI +FN
Sbjct: 413 DYSGKFAFQVGLPAKSGVSGIMIVVIPNVMGIALYSPPLDKTGNSCRGVAFCRQLIDKFN 472
Query: 435 FH 440
FH
Sbjct: 473 FH 474
>Z81073-9|CAB03030.2| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 114 bits (274), Expect = 5e-26
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 1 RHEADRNYALGFYMREHKCYPEKTNLRECMDFYFQCCSMEANCDIMSIMAATLANGGICP 180
R ADRNYAL +YMREHK +P+ NL++ +D YFQ CS+E NCD +++MAATLANGG+ P
Sbjct: 312 RETADRNYALSYYMREHKVFPKDLNLQDTLDLYFQICSIETNCDSLAVMAATLANGGVNP 371
Query: 181 ITDEKVLRPDSVRNVLSLMHSCGM 252
+ E+++ + R+ LSLM+SCGM
Sbjct: 372 MNGERIVNNRACRDTLSLMYSCGM 395
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = +3
Query: 255 DYSGQFAFKVGLPAKSGVSGAMLIVVPNVMGICTWSPPLDPLGNSCRGLQFCDDLIKRFN 434
D+SGQFAF VGLPAKSGVSG M+IV+PNVMGI +SP LD LGN+ RG++F + L++++N
Sbjct: 397 DWSGQFAFHVGLPAKSGVSGDMIIVIPNVMGIALYSPRLDKLGNTVRGVKFAEQLVQKYN 456
Query: 435 FH 440
FH
Sbjct: 457 FH 458
>Z79752-7|CAC70084.1| 583|Caenorhabditis elegans Hypothetical
protein F30F8.2 protein.
Length = 583
Score = 114 bits (274), Expect = 5e-26
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 1 RHEADRNYALGFYMREHKCYPEKTNLRECMDFYFQCCSMEANCDIMSIMAATLANGGICP 180
R ADRNYAL +YMREHK +P+ NL++ +D YFQ CS+E NCD +++MAATLANGG+ P
Sbjct: 312 RETADRNYALSYYMREHKVFPKDLNLQDTLDLYFQICSIETNCDSLAVMAATLANGGVNP 371
Query: 181 ITDEKVLRPDSVRNVLSLMHSCGM 252
+ E+++ + R+ LSLM+SCGM
Sbjct: 372 MNGERIVNNRACRDTLSLMYSCGM 395
Score = 96.3 bits (229), Expect = 1e-20
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = +3
Query: 255 DYSGQFAFKVGLPAKSGVSGAMLIVVPNVMGICTWSPPLDPLGNSCRGLQFCDDLIKRFN 434
D+SGQFAF VGLPAKSGVSG M+IV+PNVMGI +SP LD LGN+ RG++F + L++++N
Sbjct: 397 DWSGQFAFHVGLPAKSGVSGDMIIVIPNVMGIALYSPRLDKLGNTVRGVKFAEQLVQKYN 456
Query: 435 FH 440
FH
Sbjct: 457 FH 458
>U41510-2|ABP49526.1| 189|Caenorhabditis elegans Hypothetical
protein ZC449.7 protein.
Length = 189
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +1
Query: 10 ADRNYALGFYMREHKCYPE----KTNLRECMDFYFQCCSMEANCDIMSI 144
++ N+ LGF Y + TN C DFY+QC E D M+I
Sbjct: 92 SNSNHHLGFQNDPRMAYDKIIYTSTNKLGCNDFYYQCAYGEPKTDRMAI 140
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 34 FYMREHKC-YPEKTNLRECMDFYFQCCSMEANCDIMSIMAATLANGGICPITDEKVLRPD 210
+++ H YP K E + F C + N +++++A L G C T+EK+L +
Sbjct: 479 YWINTHNAIYPLKITDEEHPMYEFIYCLEKPNGSCLALISAELDQNGYCRHTEEKLLMAE 538
Query: 211 S 213
+
Sbjct: 539 N 539
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 34 FYMREHKC-YPEKTNLRECMDFYFQCCSMEANCDIMSIMAATLANGGICPITDEKVLRPD 210
+++ H YP K E + F C + N +++++A L G C T+EK+L +
Sbjct: 483 YWINTHNAIYPLKITDEEHPMYEFIYCLEKPNGSCLALISAELDQNGYCRHTEEKLLMAE 542
Query: 211 S 213
+
Sbjct: 543 N 543
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -3
Query: 133 YRSLLPW-NSTGNKSPYIPSDLFSRGSICVP-SCKNPE 26
Y L+P N+T + S +P+ F RG++C+P SC +
Sbjct: 126 YMVLMPGKNATCHMSDGLPTTFFFRGAVCMPYSCSEQD 163
>Z92830-10|CAB07363.1| 315|Caenorhabditis elegans Hypothetical
protein F11A5.12 protein.
Length = 315
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -3
Query: 361 DHVHMPITFGTTISMAPDTPDLAGSPTLKANCPE*STCRNCALTTAHYARSLVAILFHQL 182
++ H I F I+ A +AG+P CP+ T AL T +A + HQ+
Sbjct: 219 EYSHHGIIF-QAITPAMVATKMAGNPNTSFFCPDSDTFARSALNTIGHASETTGYIAHQI 277
>AC006618-8|AAK68245.1| 101|Caenorhabditis elegans Hypothetical
protein C45B2.1 protein.
Length = 101
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 338 IWDHNKHGARYSRFGRESHFESELS 264
+WD+N+H R S +GR ++E L+
Sbjct: 40 VWDYNRHEVR-SDYGRRGNYERNLN 63
>AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi
enabling proteinSID-1 protein.
Length = 776
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 270 TVQSSLHAATVH*RQHITHGVWSQYFFISYRTNSS 166
TVQS L+A + R H+TH +QY F+ ++T +
Sbjct: 152 TVQSRLNA-DIDYRLHVTHLDRAQYDFLKFKTGQT 185
>AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna
interference defectiveprotein 1 protein.
Length = 776
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 270 TVQSSLHAATVH*RQHITHGVWSQYFFISYRTNSS 166
TVQS L+A + R H+TH +QY F+ ++T +
Sbjct: 152 TVQSRLNA-DIDYRLHVTHLDRAQYDFLKFKTGQT 185
>AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical
protein CD4.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -3
Query: 370 RGGDHVHMPITFGTTISMAPDTPDLAGSPTLKANCPE*STCRNCALTTAHYARSLVAILF 191
+ G HVHM + T + A D S T P+ + L+ ++YA I+F
Sbjct: 268 KAGRHVHMVMNANQTTNQAESDEDGVDSATSLPRSPKRARTEMYILSISYYA-VFYLIIF 326
Query: 190 HQLSD 176
SD
Sbjct: 327 RSSSD 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,293,707
Number of Sequences: 27780
Number of extensions: 308573
Number of successful extensions: 826
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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