Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0752
         (561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 266 TVRFQSGTPCQIWSIGRHAY 325
           T    + T CQ+W+I R  +
Sbjct: 177 TATITAATDCQLWAIDRQCF 196


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 263 WTVRFQSGTPCQI 301
           W    + GTPCQ+
Sbjct: 178 WPEELEPGTPCQL 190


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 263 WTVRFQSGTPCQI 301
           W    + GTPCQ+
Sbjct: 178 WPEELEPGTPCQL 190


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 9    GRPKLCSGFLHEGTQMLPREN 71
            G P   S     G+Q +PR+N
Sbjct: 1764 GHPTNASAHSRSGSQSMPRQN 1784


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 263 WTVRFQSGTPCQI 301
           W    + GTPCQ+
Sbjct: 178 WPEELEPGTPCQL 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/45 (24%), Positives = 17/45 (37%)
 Frame = -2

Query: 317 GARYSRFGRESHFESELSRVVYMPQLCINDSTLRTESGRNTFSSV 183
           G +Y  FG E          + M +  +N  +      RN+  SV
Sbjct: 519 GPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESV 563


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/45 (24%), Positives = 17/45 (37%)
 Frame = -2

Query: 317 GARYSRFGRESHFESELSRVVYMPQLCINDSTLRTESGRNTFSSV 183
           G +Y  FG E          + M +  +N  +      RN+  SV
Sbjct: 519 GPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESV 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,623
Number of Sequences: 438
Number of extensions: 3897
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)