Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0745
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   3.6  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   3.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   4.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   8.3  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 181 LEKIASAFDVCRKYCLYTH 125
           +EKIA   DVC+KY L+ H
Sbjct: 303 IEKIA---DVCQKYKLWLH 318


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 157 DVCRKYCLYTHWRRXRLPTMTXLDENVR 74
           ++CRK C  T + +  + T+   DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 157 DVCRKYCLYTHWRRXRLPTMTXLDENVR 74
           ++CRK C  T + +  + T+   DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 103 LEVXFCASVCKGSTFDIRQTHLLFFREFATK 195
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 291 LEILITVTVCELTILEYKRTKKLLYRIPVTK 321


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 103 LEVXFCASVCKGSTFDIRQTHLLFFREFATK 195
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 116 LEILITVTVCELTILEYKRTKKLLYRIPVTK 146


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 299 CRXTXSLPXCSAYYG 343
           C     +P C  YYG
Sbjct: 211 CEDPEDVPGCEDYYG 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,798
Number of Sequences: 336
Number of extensions: 971
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)